| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83720403
Identifier: 83720403
GI number: 83720403
Start: 2963441
End: 2964631
Strand: Direct
Name: 83720403
Synonym: BTH_I2601
Alternate gene names: NA
Gene position: 2963441-2964631 (Clockwise)
Preceding gene: 83721090
Following gene: 83721113
Centisome position: 77.8
GC content: 67.84
Gene sequence:
>1191_bases ATGTCCACGCAGATTCTGATCGTCGGCGGCGGGCTCGGCGGCACGATGCTCGCCAACCAGCTCGCGTCGAGACTGTTCGA CGAAGTCGTCCGCGGCGACGTGCGGATCACGCTGCTGTCCGATTCACCGGACCACTACTACAAGCCGGCATTCATGTACG TCGCGTTCGGCGCGTACTTCCGCAACGAGCTCGTGCGCGCCGAGCGCTCGCTGCTGCGCCCCGAGATCGCGTTCGTCGTC GATCGCGCCACGCATTTCGATTTCGCGACACAGCACGTGCGCACGAAGAGCGGCCAGCGCTACGGCTACGACCATCTCGT GATCGCGACAGGCTGCGTGCCCTCGCCCGAGCGCATCGAGGGCCTCGCCGAAGCGGGCGACCATTTCTACCAGTACGCAC CCGCACGGCGGCTCGCCGAACGGATCGCGTCGATCGAGCGCGGCACCGTGTTCGTCACCGTCACGTTTCCGAAAACGCAC AACGTGCCGCATCAGTGCGGAATCGCGCCGATCGAGACCACGCTGATGCTCGACGACCTGCTGCGCCGCCGCGGCGTGCG CGACAAGGTCGAGATCGTCTACACGTATCCGAGCGTCTCGCAACTGCTGCGCAATTGCCTGTTCCTGCAAAAGCCGACCT GCGACGCACTGCCTGCGATTTTCGAGCGGCGCGGCATCCGCTATCAACGCAGCTTCACGCTCGCGCGCGTCGATCCGGCG CGCAAGATCGCGTATTCGGACGAAGGCGCGGAGCAGCCGTTCGACATCCTGATGGCGACGCCGCCCATTCGCGCCGTCGA CGCGGTGCGCGAAAGCGGCGTGTCCGAGGCGGCCGACGGCGAGGGCTGGCTGCCGACCGATCACGAAACGCTGCGCGTGC GCGGCGTCGAGAACGTCTACGCGATCGGCGACACGGTCGATCTGCCCGTCAGCAAGGCGGGCGGCGCGTGTCACAACCAG GCGCCCGTGATCGCCGCGAACATCGCCGCGCAAATCCGGCTCGGCCATCCGGTCGCGTGCTACGACGGCAAGGTGCAGGC GGTCGCGCAAATGGGCCTCGACGCCGGCATGCCGCTCTGGTACGACTACCGCCGCGACGTGCAGCCGACGCCGCCGACGA AGCTGGGCGGCCTGCTGCGCGGCGGCTTCAATCGCGGCATTTACTGGGCGGTCGCGCGCGGCCTCGCGTGA
Upstream 100 bases:
>100_bases GCTCAGCAAAAACACATACCCAGCTCGCCCATTTTTCACTCGATTCAGCCGGCTGCTCGCCGATGCCCTCCAAGGTCAGG CAGGCAGAAGGAGTAGAACG
Downstream 100 bases:
>100_bases ATCGAATCGCCCGCCGCTTCGAGGAGTCGCCATGCCGTCATCCCCCACGCCCACGCACGATGCGCACCCCGATACGCTCG ACGCGCCGGGCGCACCCGGC
Product: flavoprotein reductase
Products: NA
Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Oxidoreductase; NAD(FAD)-Dependent Dehydrogenase; Pyridine Nucleotide-Disulphide Oxidoreductase; SulfideQuinone Oxidoreductase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Sulfide Dehydrogenase Flavoprotein Subunit; Twin-Arginine Translocation Pathway Signal; Dehydrogenase; Flavoprotein Reductase; Sulfide Dehydrogenase; FAD-Dependent Pyridine Nucleotide-Disulphideoxido Reductase; Sulfide Quinone Oxidoreductase-Like Protein; Sulfide-Quinone Reductase; Sulfide Dehydrogenase Flavoprotein; Anti-Anti-Sigma Regulatory Factor; NAD(Fad)-Dependent Dehydrogenase Protein; Oxidoreductase Family Protein; Flavoprotein Reductase-Like Protein; Oxidoreductase Pyridine Nucleotide-Disulphide Family; Sulfide-Quinone Oxidoreductase; Sulfide Dehydrogenase Flavoprtein Subunit; Sulfide-Quinone Reductase Related Protein; Sulfide Dehydrogenase Flavoprotein Chain; Dehydrogenase/Reductase; NADH Dehydrogenase FAD-Containing Subunit; Sulfide Quinone-Rductase; Flavoprotein Reductase Conjectural; Pyridine Nucleotide-Disulfide Family Oxidoreductase; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein; SulfideQuinone Reductase; NAD(FAD)-Dependent Dehydrogenase-Like Protein; Pyridine Nucleotide-Disulfide Oxidoreductase Family; Sulfide Dehydrogenase Related Protein; Pyridine Nucleotide-Disulfide Oxidoreductase
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MSTQILIVGGGLGGTMLANQLASRLFDEVVRGDVRITLLSDSPDHYYKPAFMYVAFGAYFRNELVRAERSLLRPEIAFVV DRATHFDFATQHVRTKSGQRYGYDHLVIATGCVPSPERIEGLAEAGDHFYQYAPARRLAERIASIERGTVFVTVTFPKTH NVPHQCGIAPIETTLMLDDLLRRRGVRDKVEIVYTYPSVSQLLRNCLFLQKPTCDALPAIFERRGIRYQRSFTLARVDPA RKIAYSDEGAEQPFDILMATPPIRAVDAVRESGVSEAADGEGWLPTDHETLRVRGVENVYAIGDTVDLPVSKAGGACHNQ APVIAANIAAQIRLGHPVACYDGKVQAVAQMGLDAGMPLWYDYRRDVQPTPPTKLGGLLRGGFNRGIYWAVARGLA
Sequences:
>Translated_396_residues MSTQILIVGGGLGGTMLANQLASRLFDEVVRGDVRITLLSDSPDHYYKPAFMYVAFGAYFRNELVRAERSLLRPEIAFVV DRATHFDFATQHVRTKSGQRYGYDHLVIATGCVPSPERIEGLAEAGDHFYQYAPARRLAERIASIERGTVFVTVTFPKTH NVPHQCGIAPIETTLMLDDLLRRRGVRDKVEIVYTYPSVSQLLRNCLFLQKPTCDALPAIFERRGIRYQRSFTLARVDPA RKIAYSDEGAEQPFDILMATPPIRAVDAVRESGVSEAADGEGWLPTDHETLRVRGVENVYAIGDTVDLPVSKAGGACHNQ APVIAANIAAQIRLGHPVACYDGKVQAVAQMGLDAGMPLWYDYRRDVQPTPPTKLGGLLRGGFNRGIYWAVARGLA >Mature_395_residues STQILIVGGGLGGTMLANQLASRLFDEVVRGDVRITLLSDSPDHYYKPAFMYVAFGAYFRNELVRAERSLLRPEIAFVVD RATHFDFATQHVRTKSGQRYGYDHLVIATGCVPSPERIEGLAEAGDHFYQYAPARRLAERIASIERGTVFVTVTFPKTHN VPHQCGIAPIETTLMLDDLLRRRGVRDKVEIVYTYPSVSQLLRNCLFLQKPTCDALPAIFERRGIRYQRSFTLARVDPAR KIAYSDEGAEQPFDILMATPPIRAVDAVRESGVSEAADGEGWLPTDHETLRVRGVENVYAIGDTVDLPVSKAGGACHNQA PVIAANIAAQIRLGHPVACYDGKVQAVAQMGLDAGMPLWYDYRRDVQPTPPTKLGGLLRGGFNRGIYWAVARGLA
Specific function: Unknown
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI10864011, Length=366, Percent_Identity=24.8633879781421, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI115534373, Length=293, Percent_Identity=23.8907849829352, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17539680, Length=178, Percent_Identity=30.3370786516854, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24657386, Length=363, Percent_Identity=27.2727272727273, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI24657391, Length=363, Percent_Identity=27.2727272727273, Blast_Score=112, Evalue=4e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43746; Mature: 43614
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQILIVGGGLGGTMLANQLASRLFDEVVRGDVRITLLSDSPDHYYKPAFMYVAFGAYF CCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHH RNELVRAERSLLRPEIAFVVDRATHFDFATQHVRTKSGQRYGYDHLVIATGCVPSPERIE HHHHHHHHHHHHCCHHHEEEECCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHH GLAEAGDHFYQYAPARRLAERIASIERGTVFVTVTFPKTHNVPHQCGIAPIETTLMLDDL HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHCCCCHHHHHHHHHHH LRRRGVRDKVEIVYTYPSVSQLLRNCLFLQKPTCDALPAIFERRGIRYQRSFTLARVDPA HHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEHEEEEEECCHH RKIAYSDEGAEQPFDILMATPPIRAVDAVRESGVSEAADGEGWLPTDHETLRVRGVENVY HHEEECCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCEEE AIGDTVDLPVSKAGGACHNQAPVIAANIAAQIRLGHPVACYDGKVQAVAQMGLDAGMPLW EECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCEEEEECCHHHHHHHHCCCCCCCEE YDYRRDVQPTPPTKLGGLLRGGFNRGIYWAVARGLA EHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCC >Mature Secondary Structure STQILIVGGGLGGTMLANQLASRLFDEVVRGDVRITLLSDSPDHYYKPAFMYVAFGAYF CCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHH RNELVRAERSLLRPEIAFVVDRATHFDFATQHVRTKSGQRYGYDHLVIATGCVPSPERIE HHHHHHHHHHHHCCHHHEEEECCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHH GLAEAGDHFYQYAPARRLAERIASIERGTVFVTVTFPKTHNVPHQCGIAPIETTLMLDDL HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHCCCCHHHHHHHHHHH LRRRGVRDKVEIVYTYPSVSQLLRNCLFLQKPTCDALPAIFERRGIRYQRSFTLARVDPA HHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEHEEEEEECCHH RKIAYSDEGAEQPFDILMATPPIRAVDAVRESGVSEAADGEGWLPTDHETLRVRGVENVY HHEEECCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCEEE AIGDTVDLPVSKAGGACHNQAPVIAANIAAQIRLGHPVACYDGKVQAVAQMGLDAGMPLW EECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCEEEEECCHHHHHHHHCCCCCCCEE YDYRRDVQPTPPTKLGGLLRGGFNRGIYWAVARGLA EHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA