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The map label for this gene is asnC [C]

Identifier: 83720362

GI number: 83720362

Start: 342187

End: 342675

Strand: Reverse

Name: asnC [C]

Synonym: BTH_I0309

Alternate gene names: 83720362

Gene position: 342675-342187 (Counterclockwise)

Preceding gene: 83721205

Following gene: 83721565

Centisome position: 9.0

GC content: 69.33

Gene sequence:

>489_bases
ATGCAAAAACGCCTTTCCACGCCGCCCGCCGCGGCGAGCGCGCTCGATGCGATCGACCGCGAACTGCTGCGCGCGCTCGC
CGACGACGCGCGCCAGCCCGTCAGCGAACTCGCGCGGCGCGTCGGGCTGTCCGCGCCGAGCACGGCGGACCGGCTGCGCC
GGCTCGAAGCGCAGGGCGTGATCGCGCGCTTCACGGTCGAGCTCGATCCGCTCGCGCTCGGCTATACGCTGCAGGCGATC
GTGCGCGTGAAGCCGCTGCCCGGCCAGTTGCATCTCGTCGAGGAATTGCTGCGGCGGATTCCCGCGTTCGTCGAATGCGA
CAAGGTGACCGGCGAAGATTGCTTCATCTGCCGGCTCTACCTGCGCTCGATCGAGCAACTCGACGGGATACTCGCGAAAG
TGACCGAGCGCGCGGAGACGAGCACGGCGACCGTCAAGTCGACGCCCGTCGCGCGGCGATTGCCGCCGCTCGCGCCCGAA
GAAGATTGA

Upstream 100 bases:

>100_bases
CATGAAGAAAGCCTGACTTCGATTCTAGGGACTTGATTCGCGCATCTCCATCGATAAACTGAGCGCAAAGCGTCTTTCCA
CCTTTGAAAAGAAGGCTGTC

Downstream 100 bases:

>100_bases
CGCGCGGGCGGCGCGAAACGCAGCGCATCTCAGCGCAGCGCATCGCGATGCCGCCGATCGCCGCCTGCGCGGCGGCGGCC
TCACGCCGCCTCGCGCGCCT

Product: transcription regulator AsnC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MQKRLSTPPAAASALDAIDRELLRALADDARQPVSELARRVGLSAPSTADRLRRLEAQGVIARFTVELDPLALGYTLQAI
VRVKPLPGQLHLVEELLRRIPAFVECDKVTGEDCFICRLYLRSIEQLDGILAKVTERAETSTATVKSTPVARRLPPLAPE
ED

Sequences:

>Translated_162_residues
MQKRLSTPPAAASALDAIDRELLRALADDARQPVSELARRVGLSAPSTADRLRRLEAQGVIARFTVELDPLALGYTLQAI
VRVKPLPGQLHLVEELLRRIPAFVECDKVTGEDCFICRLYLRSIEQLDGILAKVTERAETSTATVKSTPVARRLPPLAPE
ED
>Mature_162_residues
MQKRLSTPPAAASALDAIDRELLRALADDARQPVSELARRVGLSAPSTADRLRRLEAQGVIARFTVELDPLALGYTLQAI
VRVKPLPGQLHLVEELLRRIPAFVECDKVTGEDCFICRLYLRSIEQLDGILAKVTERAETSTATVKSTPVARRLPPLAPE
ED

Specific function: Activator Of Asna Transcription; Autogenous Regulator Of Its Own Transcription; And Repressor Of The Expression Of Gida At A Post-Transcriptional Level. [C]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR013196
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 17820; Mature: 17820

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKRLSTPPAAASALDAIDRELLRALADDARQPVSELARRVGLSAPSTADRLRRLEAQGV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCE
IARFTVELDPLALGYTLQAIVRVKPLPGQLHLVEELLRRIPAFVECDKVTGEDCFICRLY
EEHEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHEECCCCCCCHHHHHHHH
LRSIEQLDGILAKVTERAETSTATVKSTPVARRLPPLAPEED
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCC
>Mature Secondary Structure
MQKRLSTPPAAASALDAIDRELLRALADDARQPVSELARRVGLSAPSTADRLRRLEAQGV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCE
IARFTVELDPLALGYTLQAIVRVKPLPGQLHLVEELLRRIPAFVECDKVTGEDCFICRLY
EEHEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHEECCCCCCCHHHHHHHH
LRSIEQLDGILAKVTERAETSTATVKSTPVARRLPPLAPEED
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA