| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83720339
Identifier: 83720339
GI number: 83720339
Start: 3598345
End: 3599067
Strand: Reverse
Name: 83720339
Synonym: BTH_I3156
Alternate gene names: NA
Gene position: 3599067-3598345 (Counterclockwise)
Preceding gene: 83718587
Following gene: 83721381
Centisome position: 94.48
GC content: 70.95
Gene sequence:
>723_bases ATGTTTCGCCCTCGCCTCGCAAGGATTCCGCACGTGAATATTTCTGCCGCCTTACCGCTTCACTTGCTTCACCGCAACGC GCTCGGCACGCTCGCGACGCACTCGCGCGCGCCCGAAGGCTACCCGTATCCGACCGTGGTGCCGTACGCGGTCGACGCGC GGCACCGGCCGGTCGTGCTCGTCAGCGGGCTCGCCGAACATACGCGCAATCTCGCGGCCGATCCGCGCGCCGGGTTTCTC GTCGTCGACGGCCTGGGCGGCGCGCCGGGCGCGTCGGGCGCGTCGGACAGCGTGCTCGAGGCTGAGCGCGCGACGCTCGT CGGCCGCTTCGAGCCGGCCGGCGCCGATCCGCACGTGGCCGCGCGTTACCTGCGCTATCACCCGGACGGCGAGCGCTATC TCGCGCTCGGCGATTTCGCGTTCTGGGCGCTCGCGTGCGAGCGGCTGCGTTATATCGGCGGATTCGGGCGGATGGGGTGG CTGGACGCAACCGGGCTGGACGCGCTTGCGCCCGTCGGCTACGAGGACGAGCGCGCGTTATGGGACGAACATGACGCATC GCGGGAGCGGCGCGCGGGGCTCGAGTTGCTCGGCGTCGACCGTTACGGCGCGGACTGGCGCTTGAACGGGCTGAGGCGCC GCACGCCGTTCGACGCGCCGAAAATGGATGCCGAGGCGCTCTCCGAGGCGCTGCGCGAGGCTGCCGCCGTTTCGCTCAAG TAA
Upstream 100 bases:
>100_bases TCGGCCGGGAGGGACGCGCGCCGTTCGAACCCGTCGAACCCGCCGAACCGGTTCTCGCCTGTCGCGTGTCCGGCGCGTAC GGCCGCGCCGGGCAGGCCCC
Downstream 100 bases:
>100_bases AGCGATCGCGCCGATTATGAGCGATTCCGCACATTGTGAGCATATTAAACGGGATAAGACCGCGTCCATGCTTTCAATCA ACGGAACCTTTCGTTTCATG
Product: pyridoxamine 5'-phosphate oxidase family protein
Products: NA
Alternate protein names: Pyridoxamine 5-Phosphate Oxidase Family Protein; Pyridoxamine Oxidase Protein; FMN Flavoprotein; Pyridoxamine 5-Phosphate Oxidase
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MFRPRLARIPHVNISAALPLHLLHRNALGTLATHSRAPEGYPYPTVVPYAVDARHRPVVLVSGLAEHTRNLAADPRAGFL VVDGLGGAPGASGASDSVLEAERATLVGRFEPAGADPHVAARYLRYHPDGERYLALGDFAFWALACERLRYIGGFGRMGW LDATGLDALAPVGYEDERALWDEHDASRERRAGLELLGVDRYGADWRLNGLRRRTPFDAPKMDAEALSEALREAAAVSLK
Sequences:
>Translated_240_residues MFRPRLARIPHVNISAALPLHLLHRNALGTLATHSRAPEGYPYPTVVPYAVDARHRPVVLVSGLAEHTRNLAADPRAGFL VVDGLGGAPGASGASDSVLEAERATLVGRFEPAGADPHVAARYLRYHPDGERYLALGDFAFWALACERLRYIGGFGRMGW LDATGLDALAPVGYEDERALWDEHDASRERRAGLELLGVDRYGADWRLNGLRRRTPFDAPKMDAEALSEALREAAAVSLK >Mature_240_residues MFRPRLARIPHVNISAALPLHLLHRNALGTLATHSRAPEGYPYPTVVPYAVDARHRPVVLVSGLAEHTRNLAADPRAGFL VVDGLGGAPGASGASDSVLEAERATLVGRFEPAGADPHVAARYLRYHPDGERYLALGDFAFWALACERLRYIGGFGRMGW LDATGLDALAPVGYEDERALWDEHDASRERRAGLELLGVDRYGADWRLNGLRRRTPFDAPKMDAEALSEALREAAAVSLK
Specific function: Unknown
COG id: COG0748
COG function: function code P; Putative heme iron utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26165; Mature: 26165
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRPRLARIPHVNISAALPLHLLHRNALGTLATHSRAPEGYPYPTVVPYAVDARHRPVVL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEE VSGLAEHTRNLAADPRAGFLVVDGLGGAPGASGASDSVLEAERATLVGRFEPAGADPHVA ECCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHEEECCCCCCCCHHHH ARYLRYHPDGERYLALGDFAFWALACERLRYIGGFGRMGWLDATGLDALAPVGYEDERAL HHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCHHH WDEHDASRERRAGLELLGVDRYGADWRLNGLRRRTPFDAPKMDAEALSEALREAAAVSLK HCHHHHHHHHHCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFRPRLARIPHVNISAALPLHLLHRNALGTLATHSRAPEGYPYPTVVPYAVDARHRPVVL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEE VSGLAEHTRNLAADPRAGFLVVDGLGGAPGASGASDSVLEAERATLVGRFEPAGADPHVA ECCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHEEECCCCCCCCHHHH ARYLRYHPDGERYLALGDFAFWALACERLRYIGGFGRMGWLDATGLDALAPVGYEDERAL HHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCHHH WDEHDASRERRAGLELLGVDRYGADWRLNGLRRRTPFDAPKMDAEALSEALREAAAVSLK HCHHHHHHHHHCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA