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The map label for this gene is rbsC [H]

Identifier: 83720324

GI number: 83720324

Start: 2783193

End: 2784242

Strand: Reverse

Name: rbsC [H]

Synonym: BTH_I2433

Alternate gene names: 83720324

Gene position: 2784242-2783193 (Counterclockwise)

Preceding gene: 83721377

Following gene: 83719883

Centisome position: 73.09

GC content: 71.52

Gene sequence:

>1050_bases
ATGAACATGCATGACCGGACGGCGACGCCGTCGTCGTCTTCTTCCGCGCCCGCCGCCGCGGGGGCGGCGCAGATCGGGGC
GCCCGGCGCGCCGCTGCCCGCCGGCTCGCGGGCGCGGCGCGCGCTTGCCGCGCTCAGGCGCTCGACGACGTTCTACCCGC
TCGTCGGGCTCGTCGCCGTGTGCGTCGCGATGATGTTCGCGAGCGACGGCTTCCTGAGCGCGGCGAACCTCGAGAACGTG
CTGCGGCAGGTGTCGATCAACGCGATCATCGGCGTCGGCATGACCTGCGTGATCCTGACGGGCGGCATCGATCTGTCGGT
CGGCTCGGCGATGGCGCTGTCCGGCACGCTGACGGCGGGCCTGCTCGTCGCGGGTGTGAACGGCGCGGCGGCGCTTGCCG
CGGGCATCGGCGTCGGGGTCGCGCTCGGCGCGGCGAACGGCTTTTTCGTCGCGTTCGCCGGGATGCCGCCCATCATCGTC
ACGCTCGCGACGATGGGCATCGCGCGCGGCCTCGCGCTCATCTACACGGGCGGCTATCCGATCGACGGGCTGCCCGACTG
GGTCCGCTTCTTCGGCAGCGGCAAGGCGCTCGGCGTGCCGGCGCCCGTGCTGACGATGCTCGTCGTCTACGCGCTCGCGT
GGCTCATGCTCGAGCGCATGCCGTTCGGCCGCTACGTCTACGCGATCGGCGGCAACGAGCACGCGACGCGGCTCTCGGGC
GTGCGCGTCGCGCGCGTGAAGCTTGCCGTCTACACGTTCGCGGGGCTCACGTCCGCGCTCGCCGCGATCGTGCTGACGGG
ACGCCTGATGAGCGGACAGCCGAACGCGGGCGTCGGCTTCGAGCTCGACGCGATCGCGGCCGTCGTGATGGGCGGCACGT
CGATCGCGGGCGGGCGCGGCTCGATCGTCGGCACGCTCGTGGGCGCGCTGCTGCTCGGCGTGCTGAACAACGGCCTGAAC
ATGATCGGCGTGAATCCCTACGTGCAGAACGTGATCAAGGGCGCAATCATCCTGCTCGCGATCTACATCGGCCGCGAGCG
CCGCAAGTGA

Upstream 100 bases:

>100_bases
GTGTTCCGGCAGGGGCGCATCGAGGCGGTGCTCGACGGCGACGCGATCGACGCGAACACGGTGATGACTTATGCGACTTC
GGACGCACGCGGAGCGAATC

Downstream 100 bases:

>100_bases
GCTTCGCGGCGCTCGCGACGTCGATGTGCGCGGCGCGCGGCGTCGCGGCGAGCGGCGGCCCGCCCGGCGCGTTCGCCCGC
CCGCCGCTTCATCCGGCATT

Product: ribose ABC transporter permease

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MNMHDRTATPSSSSSAPAAAGAAQIGAPGAPLPAGSRARRALAALRRSTTFYPLVGLVAVCVAMMFASDGFLSAANLENV
LRQVSINAIIGVGMTCVILTGGIDLSVGSAMALSGTLTAGLLVAGVNGAAALAAGIGVGVALGAANGFFVAFAGMPPIIV
TLATMGIARGLALIYTGGYPIDGLPDWVRFFGSGKALGVPAPVLTMLVVYALAWLMLERMPFGRYVYAIGGNEHATRLSG
VRVARVKLAVYTFAGLTSALAAIVLTGRLMSGQPNAGVGFELDAIAAVVMGGTSIAGGRGSIVGTLVGALLLGVLNNGLN
MIGVNPYVQNVIKGAIILLAIYIGRERRK

Sequences:

>Translated_349_residues
MNMHDRTATPSSSSSAPAAAGAAQIGAPGAPLPAGSRARRALAALRRSTTFYPLVGLVAVCVAMMFASDGFLSAANLENV
LRQVSINAIIGVGMTCVILTGGIDLSVGSAMALSGTLTAGLLVAGVNGAAALAAGIGVGVALGAANGFFVAFAGMPPIIV
TLATMGIARGLALIYTGGYPIDGLPDWVRFFGSGKALGVPAPVLTMLVVYALAWLMLERMPFGRYVYAIGGNEHATRLSG
VRVARVKLAVYTFAGLTSALAAIVLTGRLMSGQPNAGVGFELDAIAAVVMGGTSIAGGRGSIVGTLVGALLLGVLNNGLN
MIGVNPYVQNVIKGAIILLAIYIGRERRK
>Mature_349_residues
MNMHDRTATPSSSSSAPAAAGAAQIGAPGAPLPAGSRARRALAALRRSTTFYPLVGLVAVCVAMMFASDGFLSAANLENV
LRQVSINAIIGVGMTCVILTGGIDLSVGSAMALSGTLTAGLLVAGVNGAAALAAGIGVGVALGAANGFFVAFAGMPPIIV
TLATMGIARGLALIYTGGYPIDGLPDWVRFFGSGKALGVPAPVLTMLVVYALAWLMLERMPFGRYVYAIGGNEHATRLSG
VRVARVKLAVYTFAGLTSALAAIVLTGRLMSGQPNAGVGFELDAIAAVVMGGTSIAGGRGSIVGTLVGALLLGVLNNGLN
MIGVNPYVQNVIKGAIILLAIYIGRERRK

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=310, Percent_Identity=48.0645161290323, Blast_Score=253, Evalue=2e-68,
Organism=Escherichia coli, GI1790524, Length=302, Percent_Identity=40.0662251655629, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI1788896, Length=321, Percent_Identity=35.202492211838, Blast_Score=167, Evalue=8e-43,
Organism=Escherichia coli, GI145693152, Length=281, Percent_Identity=38.0782918149466, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI1789992, Length=362, Percent_Identity=35.9116022099448, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI145693214, Length=265, Percent_Identity=35.8490566037736, Blast_Score=131, Evalue=8e-32,
Organism=Escherichia coli, GI1787793, Length=284, Percent_Identity=35.2112676056338, Blast_Score=124, Evalue=7e-30,
Organism=Escherichia coli, GI1787794, Length=264, Percent_Identity=34.469696969697, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI87082395, Length=287, Percent_Identity=35.8885017421603, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1788471, Length=324, Percent_Identity=34.5679012345679, Blast_Score=117, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 35155; Mature: 35155

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMHDRTATPSSSSSAPAAAGAAQIGAPGAPLPAGSRARRALAALRRSTTFYPLVGLVAV
CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
CVAMMFASDGFLSAANLENVLRQVSINAIIGVGMTCVILTGGIDLSVGSAMALSGTLTAG
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHH
LLVAGVNGAAALAAGIGVGVALGAANGFFVAFAGMPPIIVTLATMGIARGLALIYTGGYP
HHEECCCHHHHHHHHHHHHHHEECCCCEEEEECCCCHHHHHHHHHHHHCCEEEEEECCCC
IDGLPDWVRFFGSGKALGVPAPVLTMLVVYALAWLMLERMPFGRYVYAIGGNEHATRLSG
CCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCC
VRVARVKLAVYTFAGLTSALAAIVLTGRLMSGQPNAGVGFELDAIAAVVMGGTSIAGGRG
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCEECCCCC
SIVGTLVGALLLGVLNNGLNMIGVNPYVQNVIKGAIILLAIYIGRERRK
HHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNMHDRTATPSSSSSAPAAAGAAQIGAPGAPLPAGSRARRALAALRRSTTFYPLVGLVAV
CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
CVAMMFASDGFLSAANLENVLRQVSINAIIGVGMTCVILTGGIDLSVGSAMALSGTLTAG
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHH
LLVAGVNGAAALAAGIGVGVALGAANGFFVAFAGMPPIIVTLATMGIARGLALIYTGGYP
HHEECCCHHHHHHHHHHHHHHEECCCCEEEEECCCCHHHHHHHHHHHHCCEEEEEECCCC
IDGLPDWVRFFGSGKALGVPAPVLTMLVVYALAWLMLERMPFGRYVYAIGGNEHATRLSG
CCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCC
VRVARVKLAVYTFAGLTSALAAIVLTGRLMSGQPNAGVGFELDAIAAVVMGGTSIAGGRG
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCEECCCCC
SIVGTLVGALLLGVLNNGLNMIGVNPYVQNVIKGAIILLAIYIGRERRK
HHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]