| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
Click here to switch to the map view.
The map label for this gene is capM [H]
Identifier: 83720301
GI number: 83720301
Start: 1684437
End: 1685573
Strand: Reverse
Name: capM [H]
Synonym: BTH_I1486
Alternate gene names: 83720301
Gene position: 1685573-1684437 (Counterclockwise)
Preceding gene: 83718924
Following gene: 83719094
Centisome position: 44.25
GC content: 69.66
Gene sequence:
>1137_bases ATGAGTTCCGCTTCCGCCCCGCGCATCGTTCTCGTCTGCAATACTGCCTGGGCGATCTACACATACCGGCAAGGCCTGCT TCGCATGCTGATCGCGCGCGGCGCGCAGGTGACGGTGCTCGCGCCGCGCGACCGCACCGTCGAGCCGCTCGTGCGGATGG GCTGCCGCTACGCGGAGCTGCCCGTCGCGTCGAAAGGCACGAGCCCGCGCGAGGACCTGCGCACGCTCGTCGCGCTCTAT CGGCACTATCGCGCGATCCGGCCCGATCTCGTGTTCCATTACACGATCAAGCCGAACATCTACGGCTCGATCGCCGCGTG GCTCGCGCGCGTGCCGTCGATCGCGGTGACGACGGGCCTCGGCTACGTGTTCATCCAGCAGAGCCACGCCGCGCGCGTCG CGAAGCACCTGTACCGCTTCGCGTTCCGCTTTCCGCGCGAAGTCTGGTTTCTGAACCGCGACGATCTCGATACGTTTGCG CACGAGCAGCTCCTCGCGCATCCGGCGCGCGCGCGCCTGCTGCACGGCGAAGGCGTCGACCTCGAGCAGTTCGCGCTCGC GCCGCTGCCCGCGCGCGACACGTTCACGTTCGTGCTGATCGGCCGGCTGCTGTGGGACAAGGGCGTGCGCGAATACGTCG ACGCGGCGCGCGCGCTGCGCACGCGCTATCCGCACGCGCGCTTCGCGCTGCTCGGCCCGGTCGGCGTCGACAACCCGAGC GCGATCTCGCGGGCCGACGTCGACGCATGGGTGCGCGAGGGCGTGATCGATTATCTCGGCGAGGCGCACGACGTGCGGCC GCACATTGCCGGCGCCGACTGCGTCGTGCTGCCCTCATATCGCGAGGGCGTGCCGCGCACGCTGATGGAGGCGTCCGCGA TGGGGCGGCCGATCGTCGCGACCGACGTGCCCGGCTGCCGCGACGTCGTCGCCGACGGCGAAACGGGCCTGCTATGCGCG GCCCGCGACAGCGCGAGCCTCGCCGCGCAACTCGCGCGGATGCTCGACATGAGCGCGGCCGAGCGGCGCGCGATGGGCGA ACGCGGGCGGCGGAAAGTCGTCGCGGAATTCGACGAAGCGAAGGTCGTCGAACGTTATCATCAGACAATTTCCGCCCTGA CGGGCATCACATTTTGA
Upstream 100 bases:
>100_bases TGCAGCGCGCGAAGCGCCTGCTGTTCGCGCCGCGCGGCGCGGCATGACGCGCCGCGCGCCGTCGCGTTCGCGCGCGCCCG ATTATTTTTTTCAGTCCGAC
Downstream 100 bases:
>100_bases CGGAGCAATCAGCAATGAGCACGAAGGGCACGATCCTCGTCACCGGCGGCGCGGGCTATATCGGTTCGCACACCGCCGTC GAACTGCTCGAGCACGGCTA
Product: group 1 family glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MSSASAPRIVLVCNTAWAIYTYRQGLLRMLIARGAQVTVLAPRDRTVEPLVRMGCRYAELPVASKGTSPREDLRTLVALY RHYRAIRPDLVFHYTIKPNIYGSIAAWLARVPSIAVTTGLGYVFIQQSHAARVAKHLYRFAFRFPREVWFLNRDDLDTFA HEQLLAHPARARLLHGEGVDLEQFALAPLPARDTFTFVLIGRLLWDKGVREYVDAARALRTRYPHARFALLGPVGVDNPS AISRADVDAWVREGVIDYLGEAHDVRPHIAGADCVVLPSYREGVPRTLMEASAMGRPIVATDVPGCRDVVADGETGLLCA ARDSASLAAQLARMLDMSAAERRAMGERGRRKVVAEFDEAKVVERYHQTISALTGITF
Sequences:
>Translated_378_residues MSSASAPRIVLVCNTAWAIYTYRQGLLRMLIARGAQVTVLAPRDRTVEPLVRMGCRYAELPVASKGTSPREDLRTLVALY RHYRAIRPDLVFHYTIKPNIYGSIAAWLARVPSIAVTTGLGYVFIQQSHAARVAKHLYRFAFRFPREVWFLNRDDLDTFA HEQLLAHPARARLLHGEGVDLEQFALAPLPARDTFTFVLIGRLLWDKGVREYVDAARALRTRYPHARFALLGPVGVDNPS AISRADVDAWVREGVIDYLGEAHDVRPHIAGADCVVLPSYREGVPRTLMEASAMGRPIVATDVPGCRDVVADGETGLLCA ARDSASLAAQLARMLDMSAAERRAMGERGRRKVVAEFDEAKVVERYHQTISALTGITF >Mature_377_residues SSASAPRIVLVCNTAWAIYTYRQGLLRMLIARGAQVTVLAPRDRTVEPLVRMGCRYAELPVASKGTSPREDLRTLVALYR HYRAIRPDLVFHYTIKPNIYGSIAAWLARVPSIAVTTGLGYVFIQQSHAARVAKHLYRFAFRFPREVWFLNRDDLDTFAH EQLLAHPARARLLHGEGVDLEQFALAPLPARDTFTFVLIGRLLWDKGVREYVDAARALRTRYPHARFALLGPVGVDNPSA ISRADVDAWVREGVIDYLGEAHDVRPHIAGADCVVLPSYREGVPRTLMEASAMGRPIVATDVPGCRDVVADGETGLLCAA RDSASLAAQLARMLDMSAAERRAMGERGRRKVVAEFDEAKVVERYHQTISALTGITF
Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
Organism=Escherichia coli, GI1788357, Length=205, Percent_Identity=27.8048780487805, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 42017; Mature: 41886
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSASAPRIVLVCNTAWAIYTYRQGLLRMLIARGAQVTVLAPRDRTVEPLVRMGCRYAEL CCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCHHCC PVASKGTSPREDLRTLVALYRHYRAIRPDLVFHYTIKPNIYGSIAAWLARVPSIAVTTGL CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCEEECCC GYVFIQQSHAARVAKHLYRFAFRFPREVWFLNRDDLDTFAHEQLLAHPARARLLHGEGVD CEEEEECHHHHHHHHHHHHHHHHCCHHHEEECCCCHHHHHHHHHHHCHHHHHEECCCCCC LEQFALAPLPARDTFTFVLIGRLLWDKGVREYVDAARALRTRYPHARFALLGPVGVDNPS HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCC AISRADVDAWVREGVIDYLGEAHDVRPHIAGADCVVLPSYREGVPRTLMEASAMGRPIVA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECHHHCCCCHHHHHHHHCCCCEEE TDVPGCRDVVADGETGLLCAARDSASLAAQLARMLDMSAAERRAMGERGRRKVVAEFDEA ECCCCHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVVERYHQTISALTGITF HHHHHHHHHHHHHHCCCC >Mature Secondary Structure SSASAPRIVLVCNTAWAIYTYRQGLLRMLIARGAQVTVLAPRDRTVEPLVRMGCRYAEL CCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCHHCC PVASKGTSPREDLRTLVALYRHYRAIRPDLVFHYTIKPNIYGSIAAWLARVPSIAVTTGL CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCEEECCC GYVFIQQSHAARVAKHLYRFAFRFPREVWFLNRDDLDTFAHEQLLAHPARARLLHGEGVD CEEEEECHHHHHHHHHHHHHHHHCCHHHEEECCCCHHHHHHHHHHHCHHHHHEECCCCCC LEQFALAPLPARDTFTFVLIGRLLWDKGVREYVDAARALRTRYPHARFALLGPVGVDNPS HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCC AISRADVDAWVREGVIDYLGEAHDVRPHIAGADCVVLPSYREGVPRTLMEASAMGRPIVA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECHHHCCCCHHHHHHHHCCCCEEE TDVPGCRDVVADGETGLLCAARDSASLAAQLARMLDMSAAERRAMGERGRRKVVAEFDEA ECCCCHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVVERYHQTISALTGITF HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7961465 [H]