| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is purN [H]
Identifier: 83720299
GI number: 83720299
Start: 889411
End: 890073
Strand: Direct
Name: purN [H]
Synonym: BTH_I0772
Alternate gene names: 83720299
Gene position: 889411-890073 (Clockwise)
Preceding gene: 83719346
Following gene: 83719688
Centisome position: 23.35
GC content: 69.68
Gene sequence:
>663_bases ATGAAAAAAATCGTCATCCTGATTTCCGGCCGCGGCAGCAACATGGAGGCCATCGTACGCGCTTGCGCGCGCGAGGGCTG GCCTGCCGAGGTTGCCGCCGTGATTTCCAATCGTCCGGGCGCAGCCGGCCTCGAATTCGCGGCCGCGCACGGCATCGCGA CGGCCGTCGTCGACCACCGCGCGTTCGACGGCCGCGACAGCTTCGATGCGGCGCTCGCCGCCGAGGTCGATCGCTTTGCC CCCGATCTCGTCGTGCTCGCCGGCTTCATGCGCATTCTCACGCCGGCCTTCGTCGCCAAATATGAGGGCCGGATGCTGAA CATCCATCCGTCGCTGCTGCCGAGCTTCAAGGGCATCCATACGCACCAGCAGGCGCTCGACGCGGGCGTCGCGCTGCACG GCGCGTCCGTCCACTTCGTGATTCCGGAGCTCGACAGCGGCGCGATCGTCGCGCAGGCGGCCGTGCCCGTCGTCGCGGGC GACGGCGCCGATGCGCTCGCTGCGCGCGTGCTCGCCGCCGAGCACGTGCTGTATCCGCGCGCGGTGCGCTGGTTCGTCGA AGGGAAGCTGCGTCTCGACGCGGGGCGCGCCGTCGTCGCGCCCAACGAGGCGCGCTGGCTGTTCGCGGATGCGATCGACA CGTCGACGAGCGAGGGCGTATGA
Upstream 100 bases:
>100_bases AAGCGCGGCCGGATGCCGCAAAGCAAAAGATTATAAACGCTCGGGCGGCCGGGCGGCTCAGGATGCCGGAAACGGCGGGG GCGAATGGTAAAATCCGCGG
Downstream 100 bases:
>100_bases AGCTGCACGGTTTCCTGATTGGCCAGACCGAGGCGCTCCTTGCCGACGTCCTGAAATTCGCCGGCCCGGCCGACGTGACG ACGAGCCGCTTTTTCCGCGC
Product: phosphoribosylglycinamide formyltransferase
Products: NA
Alternate protein names: 5'-phosphoribosylglycinamide transformylase; GAR transformylase; GART [H]
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MKKIVILISGRGSNMEAIVRACAREGWPAEVAAVISNRPGAAGLEFAAAHGIATAVVDHRAFDGRDSFDAALAAEVDRFA PDLVVLAGFMRILTPAFVAKYEGRMLNIHPSLLPSFKGIHTHQQALDAGVALHGASVHFVIPELDSGAIVAQAAVPVVAG DGADALAARVLAAEHVLYPRAVRWFVEGKLRLDAGRAVVAPNEARWLFADAIDTSTSEGV
Sequences:
>Translated_220_residues MKKIVILISGRGSNMEAIVRACAREGWPAEVAAVISNRPGAAGLEFAAAHGIATAVVDHRAFDGRDSFDAALAAEVDRFA PDLVVLAGFMRILTPAFVAKYEGRMLNIHPSLLPSFKGIHTHQQALDAGVALHGASVHFVIPELDSGAIVAQAAVPVVAG DGADALAARVLAAEHVLYPRAVRWFVEGKLRLDAGRAVVAPNEARWLFADAIDTSTSEGV >Mature_220_residues MKKIVILISGRGSNMEAIVRACAREGWPAEVAAVISNRPGAAGLEFAAAHGIATAVVDHRAFDGRDSFDAALAAEVDRFA PDLVVLAGFMRILTPAFVAKYEGRMLNIHPSLLPSFKGIHTHQQALDAGVALHGASVHFVIPELDSGAIVAQAAVPVVAG DGADALAARVLAAEHVLYPRAVRWFVEGKLRLDAGRAVVAPNEARWLFADAIDTSTSEGV
Specific function: De novo purine biosynthesis; third step. [C]
COG id: COG0299
COG function: function code F; Folate-dependent phosphoribosylglycinamide formyltransferase PurN
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GART family [H]
Homologues:
Organism=Homo sapiens, GI4503915, Length=190, Percent_Identity=45.2631578947368, Blast_Score=178, Evalue=4e-45, Organism=Homo sapiens, GI209869995, Length=190, Percent_Identity=45.2631578947368, Blast_Score=178, Evalue=4e-45, Organism=Homo sapiens, GI209869993, Length=190, Percent_Identity=45.2631578947368, Blast_Score=178, Evalue=4e-45, Organism=Escherichia coli, GI1788846, Length=190, Percent_Identity=54.2105263157895, Blast_Score=214, Evalue=3e-57, Organism=Escherichia coli, GI1787483, Length=156, Percent_Identity=35.2564102564103, Blast_Score=99, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17567511, Length=180, Percent_Identity=41.1111111111111, Blast_Score=143, Evalue=7e-35, Organism=Saccharomyces cerevisiae, GI6320616, Length=200, Percent_Identity=31, Blast_Score=79, Evalue=4e-16, Organism=Drosophila melanogaster, GI24582400, Length=189, Percent_Identity=44.4444444444444, Blast_Score=168, Evalue=3e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002376 - InterPro: IPR001555 - InterPro: IPR004607 [H]
Pfam domain/function: PF00551 Formyl_trans_N [H]
EC number: =2.1.2.2 [H]
Molecular weight: Translated: 23117; Mature: 23117
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIVILISGRGSNMEAIVRACAREGWPAEVAAVISNRPGAAGLEFAAAHGIATAVVDHR CCEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC AFDGRDSFDAALAAEVDRFAPDLVVLAGFMRILTPAFVAKYEGRMLNIHPSLLPSFKGIH CCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHCCCCCCCH THQQALDAGVALHGASVHFVIPELDSGAIVAQAAVPVVAGDGADALAARVLAAEHVLYPR HHHHHHHCCEEEECCEEEEEEEECCCCCEEEEECEEEEECCCHHHHHHHHHHHHHHHHHH AVRWFVEGKLRLDAGRAVVAPNEARWLFADAIDTSTSEGV HHHHEECCEEEEECCCEEECCCCCCEEEEECCCCCCCCCC >Mature Secondary Structure MKKIVILISGRGSNMEAIVRACAREGWPAEVAAVISNRPGAAGLEFAAAHGIATAVVDHR CCEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC AFDGRDSFDAALAAEVDRFAPDLVVLAGFMRILTPAFVAKYEGRMLNIHPSLLPSFKGIH CCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHCCCCCCCH THQQALDAGVALHGASVHFVIPELDSGAIVAQAAVPVVAGDGADALAARVLAAEHVLYPR HHHHHHHCCEEEECCEEEEEEEECCCCCEEEEECEEEEECCCHHHHHHHHHHHHHHHHHH AVRWFVEGKLRLDAGRAVVAPNEARWLFADAIDTSTSEGV HHHHEECCEEEEECCCEEECCCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3301838; 9205837; 9278503; 10954745; 2204419; 1522592; 1631098; 9698564; 10606510 [H]