| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is dsbB [H]
Identifier: 83720270
GI number: 83720270
Start: 1816975
End: 1817484
Strand: Reverse
Name: dsbB [H]
Synonym: BTH_I1614
Alternate gene names: 83720270
Gene position: 1817484-1816975 (Counterclockwise)
Preceding gene: 83719314
Following gene: 83720128
Centisome position: 47.71
GC content: 68.43
Gene sequence:
>510_bases ATGAACAACCTGACGCTCTCGCTGCACCGCGAACGACGACTGCTCGTGCTGCTCGGCCTCGTATGCCTCGCGCTTCTGGC CGGCGCGCTTTATCTGCAGTACGTGAAAAACGAGGACCCGTGCCCGCTTTGCATCATCCAGCGCTATTTCTTCGTGCTGA TCGCGGTGTTCGCGTTCATCGGCGCGGGCATGGCGAGCGGCGCGGGCATCGCGGTGATCGAGGCGCTCATCGTGCTGTCG GCCGCCGCGGGCGTCGGCACCGCGGCGCGCCACCTGTACGTGCAACTGAACCCGGGCTTCAGTTGCGGCTTCGACGCGCT GCAGCCTGTCGTCGACAGCCTGCCGCCCGCGCACTGGCTGCCGGGCGTGTTCAAGGTCGCCGGGCTGTGCGAGACAGTCT ATCCGCCGATCTTCGGCATCCTGCTGCCCGGCTGGGCGCTGATCGCGTTCGCGCTGATCGTGGTGCCCGTCGCCGCGAGC CTGCTGCGCCACCGCGGCCGGCTGCGCTGA
Upstream 100 bases:
>100_bases CCGCCTGCGTGCCGGATGCCGCGCCGTCGGAAAGCGGCGCGGCGTTCGCGTTAAAATCCGACGATTCATTTTCCCGAACG CTCGAAGGAATCCCGTTTCG
Downstream 100 bases:
>100_bases TCGGCCCGGCGCGGTCGCACACTGCGCGGCCGCCCGCGCCGCCGGCCGGCGCTGCTCGTTTTCCCGGGCATCGCGGCCAG CGGGCCGGCGCGATCGGCGG
Product: disulfide bond formation protein B
Products: NA
Alternate protein names: Disulfide oxidoreductase [H]
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MNNLTLSLHRERRLLVLLGLVCLALLAGALYLQYVKNEDPCPLCIIQRYFFVLIAVFAFIGAGMASGAGIAVIEALIVLS AAAGVGTAARHLYVQLNPGFSCGFDALQPVVDSLPPAHWLPGVFKVAGLCETVYPPIFGILLPGWALIAFALIVVPVAAS LLRHRGRLR
Sequences:
>Translated_169_residues MNNLTLSLHRERRLLVLLGLVCLALLAGALYLQYVKNEDPCPLCIIQRYFFVLIAVFAFIGAGMASGAGIAVIEALIVLS AAAGVGTAARHLYVQLNPGFSCGFDALQPVVDSLPPAHWLPGVFKVAGLCETVYPPIFGILLPGWALIAFALIVVPVAAS LLRHRGRLR >Mature_169_residues MNNLTLSLHRERRLLVLLGLVCLALLAGALYLQYVKNEDPCPLCIIQRYFFVLIAVFAFIGAGMASGAGIAVIEALIVLS AAAGVGTAARHLYVQLNPGFSCGFDALQPVVDSLPPAHWLPGVFKVAGLCETVYPPIFGILLPGWALIAFALIVVPVAAS LLRHRGRLR
Specific function: Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein [H]
COG id: COG1495
COG function: function code O; Disulfide bond formation protein DsbB
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DsbB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003752 - InterPro: IPR022920 [H]
Pfam domain/function: PF02600 DsbB [H]
EC number: NA
Molecular weight: Translated: 18060; Mature: 18060
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNLTLSLHRERRLLVLLGLVCLALLAGALYLQYVKNEDPCPLCIIQRYFFVLIAVFAFI CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH GAGMASGAGIAVIEALIVLSAAAGVGTAARHLYVQLNPGFSCGFDALQPVVDSLPPAHWL HCCCCCCCHHHHHHHHHHHHHHCCCCHHHHEEEEEECCCCCCCHHHHHHHHHCCCCCHHH PGVFKVAGLCETVYPPIFGILLPGWALIAFALIVVPVAASLLRHRGRLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNNLTLSLHRERRLLVLLGLVCLALLAGALYLQYVKNEDPCPLCIIQRYFFVLIAVFAFI CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH GAGMASGAGIAVIEALIVLSAAAGVGTAARHLYVQLNPGFSCGFDALQPVVDSLPPAHWL HCCCCCCCHHHHHHHHHHHHHHCCCCHHHHEEEEEECCCCCCCHHHHHHHHHCCCCCHHH PGVFKVAGLCETVYPPIFGILLPGWALIAFALIVVPVAASLLRHRGRLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA