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The map label for this gene is yegW [H]

Identifier: 83720263

GI number: 83720263

Start: 866688

End: 867434

Strand: Reverse

Name: yegW [H]

Synonym: BTH_I0754

Alternate gene names: 83720263

Gene position: 867434-866688 (Counterclockwise)

Preceding gene: 83719255

Following gene: 83718775

Centisome position: 22.77

GC content: 66.0

Gene sequence:

>747_bases
ATGAAGCCATCGACGGAAGACCGCTGGTCCGACCTGCGCCCCGACCCCGACAACGACACGCCGCTCTATCTGCAACTCGC
CCGCAAGCTGGGCGACGCAATCCACGACAACCGCTGGGCCGCAGGCGAAGCGCTGCCTTCGGAACGACTGCTCGCGGAAT
CGCTCGGCGTGTCGCGAATCACCGCGCGCAAGGCGATCGCGCTGCTCGTCGAGCAAGGGCTCATCCGGCGCACGCAAGGC
GCGGGCAACTTCATTCAGCCGCGCTACGAGGACCCGCTGTCGCGGCTGTCGAGCTTCAGCGAGATGCTCAAGCGCCGCGG
CTTCACGCCGAGCTCCACGTGGCTGTCGCGCGACATCCAGCCCGCGAATCGCGACGAGGTGATCCAGCTCGGGCTGTCGC
CCGCTGCATCCGTCACGCGCCTGAAGCGTCTGCGGCTCGCGGACGGCATCGTGATGGCCGTCGAAAACTCCACGTTCCCC
GCCACGATCGTTCCCGATCCGCAGGCGATCGGCGATTCGCTGTACAGCTATCTCGAGCAGCGCGGCACGCCGATCGTGCG
CGCGCTGCAGCACTTTCGCGCGGTCAACGCAACCGACGAGATCGCGCGGCAGATGGGCATCGCGCCGCACGAAGCGCTCC
TCTTGATCACGCGAATCGGCTTCACGCACGATCAGCGCGCGATCGAACTCACCGACACGTACTGTCGGAACGATTACTAC
GATTTCGTCGTCGAGCTGCGCAAGTAA

Upstream 100 bases:

>100_bases
AGCGATTCGACGCGCGCCGGGCGGCATCGCGCGCAAAACCCGGCTATAACCGCGGCACGCGATGTCTTAGAATGGCCGCA
TCGTTTTTTATGCCCACTCC

Downstream 100 bases:

>100_bases
GCGGCATGCGCCGCGCGCGTCACGGCAGCCGGCGCGGCGCATCGTGGTTGCTCGGCACCGGCCCGCTTGGACGGCGCGGC
GGCGTCGCCGGCAGTATCGG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MKPSTEDRWSDLRPDPDNDTPLYLQLARKLGDAIHDNRWAAGEALPSERLLAESLGVSRITARKAIALLVEQGLIRRTQG
AGNFIQPRYEDPLSRLSSFSEMLKRRGFTPSSTWLSRDIQPANRDEVIQLGLSPAASVTRLKRLRLADGIVMAVENSTFP
ATIVPDPQAIGDSLYSYLEQRGTPIVRALQHFRAVNATDEIARQMGIAPHEALLLITRIGFTHDQRAIELTDTYCRNDYY
DFVVELRK

Sequences:

>Translated_248_residues
MKPSTEDRWSDLRPDPDNDTPLYLQLARKLGDAIHDNRWAAGEALPSERLLAESLGVSRITARKAIALLVEQGLIRRTQG
AGNFIQPRYEDPLSRLSSFSEMLKRRGFTPSSTWLSRDIQPANRDEVIQLGLSPAASVTRLKRLRLADGIVMAVENSTFP
ATIVPDPQAIGDSLYSYLEQRGTPIVRALQHFRAVNATDEIARQMGIAPHEALLLITRIGFTHDQRAIELTDTYCRNDYY
DFVVELRK
>Mature_248_residues
MKPSTEDRWSDLRPDPDNDTPLYLQLARKLGDAIHDNRWAAGEALPSERLLAESLGVSRITARKAIALLVEQGLIRRTQG
AGNFIQPRYEDPLSRLSSFSEMLKRRGFTPSSTWLSRDIQPANRDEVIQLGLSPAASVTRLKRLRLADGIVMAVENSTFP
ATIVPDPQAIGDSLYSYLEQRGTPIVRALQHFRAVNATDEIARQMGIAPHEALLLITRIGFTHDQRAIELTDTYCRNDYY
DFVVELRK

Specific function: Unknown

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788418, Length=228, Percent_Identity=31.5789473684211, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1786950, Length=228, Percent_Identity=30.2631578947368, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1790118, Length=233, Percent_Identity=29.6137339055794, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI87082252, Length=221, Percent_Identity=27.6018099547511, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1790540, Length=228, Percent_Identity=28.0701754385965, Blast_Score=74, Evalue=7e-15,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011663
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]

EC number: NA

Molecular weight: Translated: 27927; Mature: 27927

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPSTEDRWSDLRPDPDNDTPLYLQLARKLGDAIHDNRWAAGEALPSERLLAESLGVSRI
CCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHH
TARKAIALLVEQGLIRRTQGAGNFIQPRYEDPLSRLSSFSEMLKRRGFTPSSTWLSRDIQ
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCC
PANRDEVIQLGLSPAASVTRLKRLRLADGIVMAVENSTFPATIVPDPQAIGDSLYSYLEQ
CCCHHHEEEECCCCHHHHHHHHHHHHHCCEEEEEECCCCCEEECCCHHHHHHHHHHHHHH
RGTPIVRALQHFRAVNATDEIARQMGIAPHEALLLITRIGFTHDQRAIELTDTYCRNDYY
CCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEHHHHHHHCCHH
DFVVELRK
HHHHHCCC
>Mature Secondary Structure
MKPSTEDRWSDLRPDPDNDTPLYLQLARKLGDAIHDNRWAAGEALPSERLLAESLGVSRI
CCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHH
TARKAIALLVEQGLIRRTQGAGNFIQPRYEDPLSRLSSFSEMLKRRGFTPSSTWLSRDIQ
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCC
PANRDEVIQLGLSPAASVTRLKRLRLADGIVMAVENSTFPATIVPDPQAIGDSLYSYLEQ
CCCHHHEEEECCCCHHHHHHHHHHHHHCCEEEEEECCCCCEEECCCHHHHHHHHHHHHHH
RGTPIVRALQHFRAVNATDEIARQMGIAPHEALLLITRIGFTHDQRAIELTDTYCRNDYY
CCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEHHHHHHHCCHH
DFVVELRK
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]