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The map label for this gene is yjhH [C]

Identifier: 83720207

GI number: 83720207

Start: 214983

End: 215993

Strand: Direct

Name: yjhH [C]

Synonym: BTH_I0185

Alternate gene names: 83720207

Gene position: 214983-215993 (Clockwise)

Preceding gene: 83719530

Following gene: 83720460

Centisome position: 5.64

GC content: 68.55

Gene sequence:

>1011_bases
TTGGACTTGAATCGTTCACGGTGCAAGAATCCGCTCACCACTTGTCACGCCGCACCGGCACGAACGCTCATGTCACGCTA
TACGCCCACCGAATTCGCCCGCCAGATCGGCTCTGGCCTGCTGTCTTTCCCGGTCACGCATTTCAGGGCCGATCTGTCGT
TCGACGAGGCCGCCTATCGCGCGAACCTCGGCTGGCTCTTCAGCCACGACGCCGCAGGCCTCTTCGCCGCAGGCGGCACG
GGCGAGTTCTTCTCGCTCACGCCCGCCGAAGTCGATCGCGTCGTGCGCGCGGCCGTCGCCGAGACGGGCGGCCGGCTGCC
CGTGATCGCGCCGGCGGGCTACGGCACCGCGATGGCGATCGACTATTGCAAGGCCGCCGAGGCGGCGGGCGCCGACGGCA
TCCTGCTGCTGCCGCCGTATCTGACGGAGGCGTCGGCGGACGGCGTCGCCGCGCACGTCGAGCAGGTCTGCCGCGCGACG
CGCCTCGGCGTGATCGTCTACAACCGCGCGAACCAGGTGCTCGACGAAAACGCGCTCGCGCGCCTCGCCGAGCGCTGCCC
GAACCTCGTCGGATTCAAGGACGGCGTCGGCGACATCGAGCTGATGACGCGCATCTACACGCGGCTCGGCGAGCGCTTCA
CCTACATCGGCGGCCTGCCGACTGCGGAGACGTTCGCGCTGCCGTACCTCACGCTCGGCGTGACGACGTACTCGTCGGCG
ATCTTCAACTTCGTGCCGCGCTTCGCGCTCGATTTCTACGCGGCCGTGCGCGCGCAGGACCACGCGAAGGTGTACGCGAT
GCTCGATCAGTTCGTTCTGCCGTACATCGCGCTGCGCAATCGCAAGCGCGGCTATGCCGTGTCGATCGTGAAGGCCGGGA
TGAGGGTGGTCGGACGCAGCGCAGGCCCCGTGCGTGCGCCGCTGACCGATCTGACGGGCGCGGAACTGGCCGAGTTGTCG
GCGCTCGTCGCCCGGATCGCCGACGTCGCCGAGGCGCAAGCATGTCTGTGA

Upstream 100 bases:

>100_bases
GCGCCCGAAGTGCAATTCCTCCGCGACGGCGACGAAACAGCGAAGCTGGCTGAGTTCGAACATTGATCCAAAATCTGTAT
TGATTAAGTCATTCGTTATC

Downstream 100 bases:

>100_bases
GCGGCGAACTGATGCTGGGCGGCGAGCGCGTCGCGCCCGGCGAGCGCGCCGCCGTGCGCGCGACCGATCCGGCGACAGGC
GCGACGCTCGAGCCGCCGTT

Product: 5-dehydro-4-deoxyglucarate dehydratase

Products: NA

Alternate protein names: 5-keto-4-deoxy-glucarate dehydratase; KDGDH [H]

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MDLNRSRCKNPLTTCHAAPARTLMSRYTPTEFARQIGSGLLSFPVTHFRADLSFDEAAYRANLGWLFSHDAAGLFAAGGT
GEFFSLTPAEVDRVVRAAVAETGGRLPVIAPAGYGTAMAIDYCKAAEAAGADGILLLPPYLTEASADGVAAHVEQVCRAT
RLGVIVYNRANQVLDENALARLAERCPNLVGFKDGVGDIELMTRIYTRLGERFTYIGGLPTAETFALPYLTLGVTTYSSA
IFNFVPRFALDFYAAVRAQDHAKVYAMLDQFVLPYIALRNRKRGYAVSIVKAGMRVVGRSAGPVRAPLTDLTGAELAELS
ALVARIADVAEAQACL

Sequences:

>Translated_336_residues
MDLNRSRCKNPLTTCHAAPARTLMSRYTPTEFARQIGSGLLSFPVTHFRADLSFDEAAYRANLGWLFSHDAAGLFAAGGT
GEFFSLTPAEVDRVVRAAVAETGGRLPVIAPAGYGTAMAIDYCKAAEAAGADGILLLPPYLTEASADGVAAHVEQVCRAT
RLGVIVYNRANQVLDENALARLAERCPNLVGFKDGVGDIELMTRIYTRLGERFTYIGGLPTAETFALPYLTLGVTTYSSA
IFNFVPRFALDFYAAVRAQDHAKVYAMLDQFVLPYIALRNRKRGYAVSIVKAGMRVVGRSAGPVRAPLTDLTGAELAELS
ALVARIADVAEAQACL
>Mature_336_residues
MDLNRSRCKNPLTTCHAAPARTLMSRYTPTEFARQIGSGLLSFPVTHFRADLSFDEAAYRANLGWLFSHDAAGLFAAGGT
GEFFSLTPAEVDRVVRAAVAETGGRLPVIAPAGYGTAMAIDYCKAAEAAGADGILLLPPYLTEASADGVAAHVEQVCRAT
RLGVIVYNRANQVLDENALARLAERCPNLVGFKDGVGDIELMTRIYTRLGERFTYIGGLPTAETFALPYLTLGVTTYSSA
IFNFVPRFALDFYAAVRAQDHAKVYAMLDQFVLPYIALRNRKRGYAVSIVKAGMRVVGRSAGPVRAPLTDLTGAELAELS
ALVARIADVAEAQACL

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Escherichia coli, GI87082415, Length=268, Percent_Identity=29.1044776119403, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI1786463, Length=233, Percent_Identity=30.0429184549356, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1788823, Length=223, Percent_Identity=27.8026905829596, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR017655
- InterPro:   IPR002220 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.41 [H]

Molecular weight: Translated: 36065; Mature: 36065

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLNRSRCKNPLTTCHAAPARTLMSRYTPTEFARQIGSGLLSFPVTHFRADLSFDEAAYR
CCCCHHHCCCCHHHHHCHHHHHHHHHCCHHHHHHHHHCHHHHCCHHHHHHCCCHHHHHHH
ANLGWLFSHDAAGLFAAGGTGEFFSLTPAEVDRVVRAAVAETGGRLPVIAPAGYGTAMAI
CCCCEEEECCCCCEEECCCCCCCEECCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHH
DYCKAAEAAGADGILLLPPYLTEASADGVAAHVEQVCRATRLGVIVYNRANQVLDENALA
HHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHH
RLAERCPNLVGFKDGVGDIELMTRIYTRLGERFTYIGGLPTAETFALPYLTLGVTTYSSA
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHH
IFNFVPRFALDFYAAVRAQDHAKVYAMLDQFVLPYIALRNRKRGYAVSIVKAGMRVVGRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
AGPVRAPLTDLTGAELAELSALVARIADVAEAQACL
CCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLNRSRCKNPLTTCHAAPARTLMSRYTPTEFARQIGSGLLSFPVTHFRADLSFDEAAYR
CCCCHHHCCCCHHHHHCHHHHHHHHHCCHHHHHHHHHCHHHHCCHHHHHHCCCHHHHHHH
ANLGWLFSHDAAGLFAAGGTGEFFSLTPAEVDRVVRAAVAETGGRLPVIAPAGYGTAMAI
CCCCEEEECCCCCEEECCCCCCCEECCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHH
DYCKAAEAAGADGILLLPPYLTEASADGVAAHVEQVCRATRLGVIVYNRANQVLDENALA
HHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHH
RLAERCPNLVGFKDGVGDIELMTRIYTRLGERFTYIGGLPTAETFALPYLTLGVTTYSSA
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHH
IFNFVPRFALDFYAAVRAQDHAKVYAMLDQFVLPYIALRNRKRGYAVSIVKAGMRVVGRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
AGPVRAPLTDLTGAELAELSALVARIADVAEAQACL
CCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]