| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is ureC [H]
Identifier: 83720169
GI number: 83720169
Start: 1695019
End: 1696713
Strand: Reverse
Name: ureC [H]
Synonym: BTH_I1496
Alternate gene names: 83720169
Gene position: 1696713-1695019 (Counterclockwise)
Preceding gene: 83719368
Following gene: 83720906
Centisome position: 44.54
GC content: 68.08
Gene sequence:
>1695_bases TTGAGCCGCCGCGCGTATGCGGAAATGTACGGGCCGACGACGGGCGACCGCATTCGCCTCGCCGACACCGAGCTGCTGAT CGAAGTCGAGCGCGACTACACGATCTACGGCGAGGAAGTGAAGTTCGGCGGCGGCAAGGTGATCCGCGACGGAATGGGCC AGTCGCAGCTGAGCGCGGCCGACGTGGCGGACACGGTGATCACGAACGCGGTGATCCTCGACCACTGGGGCATCGTGAAA GCGGACATCGCGATCAAGCACGGGCGCATCGCGGCGATCGGCAAGGCCGGCAATCCGGACATCCAGCCGGGCGTGACGAT CGCGATCGGCGCGGCAACCGAGATCATCGCGGGCGAAGGCCTGATCGTGACGGCGGGCGGCATCGATACGCACATCCACT TCATCAGCCCGCAGCAGATCGACGAGGCGCTCGCGTCGGGCGTGACGACGATGATCGGCGGCGGCACGGGCCCCGCCACC GGCACCAACGCGACGACCTGCACGCCGGGGCCCTGGCACATGGAGCGGATGCTTCAGGCGGCCGACGGCTGGCCGATCAA CCTCGGCTTTCTCGGCAAGGGCAACGCAAGCCGGCCGCAGCCGCTCGTCGAGCAGATCGAGGCGGGCGCGATCGGCCTCA AGCTGCATGAGGACTGGGGCACGACGCCCGCCGCGATCGACAACTGCCTGACGGTGGCGGACGACACCGACACGCAGGTC GCGATCCACACCGACACGCTGAACGAAGGCGGCTTCGTCGAGGCGACGGTCGCCGCGTTCAAGGGCCGCACGATCCACAC GTACCACACCGAAGGCGCGGGCGGCGGCCACGCGCCCGACATCCTGAAGGTATGCGGCGAGCCGAACGTGCTGCCGTCGT CGACGAATCCCACGCGCCCGTACACGATCAACACGCTCGACGAGCATCTCGACATGCTGATGGTCTGCCATCACCTCGAC CCGTCGATCGCCGAGGATCTCGCGTTCGCCGAATCGCGGATTCGCCGCGAGACGATCGCGGCCGAGGACATCCTGCACGA TCTTGGCGCGCTGTCGATGCTGTCGTCCGATTCGCAGGCGATGGGCCGCGTCGGCGAAGTGATCATCCGCACGTGGCAGA GCGCGCACAAGATGAAGATGCAGCGCGGCGCGCTCGCCGAGGACAGCGCGCGCAACGACAACTTCCGCGCGAAGCGCTAC GTCGCGAAGTACACGATCAATCCGGCACTCACGCACGGCATCGCGCACGAAGTCGGCTCGATCGAGCCGGGCAAATGGGC GGACCTCGTGCTGTGGGAGCCCGCGTTCTTCGGGGTCAAGCCCGCGATGATCATCAAGGGCGGGATGATCGCGGTCGCGC AGATGGGAGATCCGAACGCGTCGATCCCGACGCCGCAGCCCGTTCATTACCGCGAGATGTTCGCCACCCGCGGCGGCGCG CTCGCGCGCACGTCGCTCACGTTCGTGTCGCAGCTCACGCTCGACGCGGGCATCGGCGCGCGCTATGGGCTCGCGAAGCG GCTCGTGCCGGTGCGCGGCTGCCGCACGGTGACCAAGCGCGACATGATCCACAACGCGTGGCAGCCGGCCATCAGCGTCG ACCCCGAAACCTACGACGTCGTCGCCGACGGCGCGCTGCTCACCTGCGAGCCCGCCGCCGTGCTGCCGATGGCGCAACGC TACTTCCTGTTCTGA
Upstream 100 bases:
>100_bases AGGGCAAGGTGATGGGGCCGCTCTGAGCGCCGGCGCCGCGCTGCGTTCCGCTGACACGCCCGCACGGGCATCCGAAGGAT TCGACGACATGACATTACGT
Downstream 100 bases:
>100_bases AGTTCTGACGAATCAACATGCGCACGATCGACAAACGCATCGCCCCGAACGTGAAGCTCGCCACCGCGCTCGTCGCGCGC GCGCCGACGCTCACGCTCGC
Product: urease subunit alpha
Products: NA
Alternate protein names: Urea amidohydrolase subunit alpha [H]
Number of amino acids: Translated: 564; Mature: 563
Protein sequence:
>564_residues MSRRAYAEMYGPTTGDRIRLADTELLIEVERDYTIYGEEVKFGGGKVIRDGMGQSQLSAADVADTVITNAVILDHWGIVK ADIAIKHGRIAAIGKAGNPDIQPGVTIAIGAATEIIAGEGLIVTAGGIDTHIHFISPQQIDEALASGVTTMIGGGTGPAT GTNATTCTPGPWHMERMLQAADGWPINLGFLGKGNASRPQPLVEQIEAGAIGLKLHEDWGTTPAAIDNCLTVADDTDTQV AIHTDTLNEGGFVEATVAAFKGRTIHTYHTEGAGGGHAPDILKVCGEPNVLPSSTNPTRPYTINTLDEHLDMLMVCHHLD PSIAEDLAFAESRIRRETIAAEDILHDLGALSMLSSDSQAMGRVGEVIIRTWQSAHKMKMQRGALAEDSARNDNFRAKRY VAKYTINPALTHGIAHEVGSIEPGKWADLVLWEPAFFGVKPAMIIKGGMIAVAQMGDPNASIPTPQPVHYREMFATRGGA LARTSLTFVSQLTLDAGIGARYGLAKRLVPVRGCRTVTKRDMIHNAWQPAISVDPETYDVVADGALLTCEPAAVLPMAQR YFLF
Sequences:
>Translated_564_residues MSRRAYAEMYGPTTGDRIRLADTELLIEVERDYTIYGEEVKFGGGKVIRDGMGQSQLSAADVADTVITNAVILDHWGIVK ADIAIKHGRIAAIGKAGNPDIQPGVTIAIGAATEIIAGEGLIVTAGGIDTHIHFISPQQIDEALASGVTTMIGGGTGPAT GTNATTCTPGPWHMERMLQAADGWPINLGFLGKGNASRPQPLVEQIEAGAIGLKLHEDWGTTPAAIDNCLTVADDTDTQV AIHTDTLNEGGFVEATVAAFKGRTIHTYHTEGAGGGHAPDILKVCGEPNVLPSSTNPTRPYTINTLDEHLDMLMVCHHLD PSIAEDLAFAESRIRRETIAAEDILHDLGALSMLSSDSQAMGRVGEVIIRTWQSAHKMKMQRGALAEDSARNDNFRAKRY VAKYTINPALTHGIAHEVGSIEPGKWADLVLWEPAFFGVKPAMIIKGGMIAVAQMGDPNASIPTPQPVHYREMFATRGGA LARTSLTFVSQLTLDAGIGARYGLAKRLVPVRGCRTVTKRDMIHNAWQPAISVDPETYDVVADGALLTCEPAAVLPMAQR YFLF >Mature_563_residues SRRAYAEMYGPTTGDRIRLADTELLIEVERDYTIYGEEVKFGGGKVIRDGMGQSQLSAADVADTVITNAVILDHWGIVKA DIAIKHGRIAAIGKAGNPDIQPGVTIAIGAATEIIAGEGLIVTAGGIDTHIHFISPQQIDEALASGVTTMIGGGTGPATG TNATTCTPGPWHMERMLQAADGWPINLGFLGKGNASRPQPLVEQIEAGAIGLKLHEDWGTTPAAIDNCLTVADDTDTQVA IHTDTLNEGGFVEATVAAFKGRTIHTYHTEGAGGGHAPDILKVCGEPNVLPSSTNPTRPYTINTLDEHLDMLMVCHHLDP SIAEDLAFAESRIRRETIAAEDILHDLGALSMLSSDSQAMGRVGEVIIRTWQSAHKMKMQRGALAEDSARNDNFRAKRYV AKYTINPALTHGIAHEVGSIEPGKWADLVLWEPAFFGVKPAMIIKGGMIAVAQMGDPNASIPTPQPVHYREMFATRGGAL ARTSLTFVSQLTLDAGIGARYGLAKRLVPVRGCRTVTKRDMIHNAWQPAISVDPETYDVVADGALLTCEPAAVLPMAQRY FLF
Specific function: Unknown
COG id: COG0804
COG function: function code E; Urea amidohydrolase (urease) alpha subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 urease domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011059 - InterPro: IPR011612 - InterPro: IPR005848 - InterPro: IPR017951 - InterPro: IPR017950 [H]
Pfam domain/function: PF01979 Amidohydro_1; PF00449 Urease_alpha [H]
EC number: =3.5.1.5 [H]
Molecular weight: Translated: 60302; Mature: 60171
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS01120 UREASE_1 ; PS00145 UREASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRAYAEMYGPTTGDRIRLADTELLIEVERDYTIYGEEVKFGGGKVIRDGMGQSQLSAA CCCCCCHHHCCCCCCCEEEEECCEEEEEEECCEEEECCEEEECCCEEEECCCCCHHHHHH DVADTVITNAVILDHWGIVKADIAIKHGRIAAIGKAGNPDIQPGVTIAIGAATEIIAGEG HHHHHHHHHEEEEECCCEEEEEEEEECCCEEEECCCCCCCCCCCEEEEECCCEEEEECCC LIVTAGGIDTHIHFISPQQIDEALASGVTTMIGGGTGPATGTNATTCTPGPWHMERMLQA EEEEECCCEEEEEEECHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH ADGWPINLGFLGKGNASRPQPLVEQIEAGAIGLKLHEDWGTTPAAIDNCLTVADDTDTQV CCCCEEEEEEECCCCCCCCCHHHHHHCCCEEEEEEECCCCCCHHHHHCEEEEECCCCCEE AIHTDTLNEGGFVEATVAAFKGRTIHTYHTEGAGGGHAPDILKVCGEPNVLPSSTNPTRP EEEECCCCCCCEEEEEHHHHCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC YTINTLDEHLDMLMVCHHLDPSIAEDLAFAESRIRRETIAAEDILHDLGALSMLSSDSQA EECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH MGRVGEVIIRTWQSAHKMKMQRGALAEDSARNDNFRAKRYVAKYTINPALTHGIAHEVGS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEEEEECCHHHHHHHHHHHCC IEPGKWADLVLWEPAFFGVKPAMIIKGGMIAVAQMGDPNASIPTPQPVHYREMFATRGGA CCCCCCEEEEEECCHHHCCCCCEEEECCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCC LARTSLTFVSQLTLDAGIGARYGLAKRLVPVRGCRTVTKRDMIHNAWQPAISVDPETYDV HHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEECCCCCEEE VADGALLTCEPAAVLPMAQRYFLF EECCEEEEECCHHHHHHHHHHHCC >Mature Secondary Structure SRRAYAEMYGPTTGDRIRLADTELLIEVERDYTIYGEEVKFGGGKVIRDGMGQSQLSAA CCCCCHHHCCCCCCCEEEEECCEEEEEEECCEEEECCEEEECCCEEEECCCCCHHHHHH DVADTVITNAVILDHWGIVKADIAIKHGRIAAIGKAGNPDIQPGVTIAIGAATEIIAGEG HHHHHHHHHEEEEECCCEEEEEEEEECCCEEEECCCCCCCCCCCEEEEECCCEEEEECCC LIVTAGGIDTHIHFISPQQIDEALASGVTTMIGGGTGPATGTNATTCTPGPWHMERMLQA EEEEECCCEEEEEEECHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH ADGWPINLGFLGKGNASRPQPLVEQIEAGAIGLKLHEDWGTTPAAIDNCLTVADDTDTQV CCCCEEEEEEECCCCCCCCCHHHHHHCCCEEEEEEECCCCCCHHHHHCEEEEECCCCCEE AIHTDTLNEGGFVEATVAAFKGRTIHTYHTEGAGGGHAPDILKVCGEPNVLPSSTNPTRP EEEECCCCCCCEEEEEHHHHCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC YTINTLDEHLDMLMVCHHLDPSIAEDLAFAESRIRRETIAAEDILHDLGALSMLSSDSQA EECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH MGRVGEVIIRTWQSAHKMKMQRGALAEDSARNDNFRAKRYVAKYTINPALTHGIAHEVGS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEEEEECCHHHHHHHHHHHCC IEPGKWADLVLWEPAFFGVKPAMIIKGGMIAVAQMGDPNASIPTPQPVHYREMFATRGGA CCCCCCEEEEEECCHHHCCCCCEEEECCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCC LARTSLTFVSQLTLDAGIGARYGLAKRLVPVRGCRTVTKRDMIHNAWQPAISVDPETYDV HHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEECCCCCEEE VADGALLTCEPAAVLPMAQRYFLF EECCEEEEECCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA