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The map label for this gene is ybcL [H]

Identifier: 83720143

GI number: 83720143

Start: 3549436

End: 3550032

Strand: Direct

Name: ybcL [H]

Synonym: BTH_I3112

Alternate gene names: 83720143

Gene position: 3549436-3550032 (Clockwise)

Preceding gene: 83719022

Following gene: 83719659

Centisome position: 93.18

GC content: 71.52

Gene sequence:

>597_bases
ATGCGTGTGGGTCGCCGAGTCGTGCCGCGAGGTTCGTCCCGTCGCCGGCTCTCGCTCGCCCTCGCCTGCGTTTTACTTTT
CGGCCCGATCGGCAGCTCGCGCGCGCTCGCCGAAGACGCATTCACGCTGACGAGCGACGATCTGCGCCCCGGCGGCCGGG
TCGGCGCGCCGCACGTATTCAATCAGGGCGACTGCAAGGGCGGCAACCGCTCGCCGCAGCTCGCGTGGCGCAACCCTCCG
CCCGGCACGAAGGGCTTCGCCGTCACGATGTTCGATCCCGACGCGCCCGGCCGCGGCTGGTGGCACTGGGCGGTCGCCGG
AATTCCGGCGAGCGTGTCGAGCCTGCCCGCCGACGCGAGCGCGTCCGGCTTCCTGCGCAAGCTCGGCGCGGTCGAGGCGC
GCAACGATTTCGGCATCGACGGCTACGGCGGCCCGTGCCCGCCGCCCGGCAAGCCGCACCGCTACGTGATCACCGTCTAC
GCGCTGAAGGCGACCGACCTGCGCGTCGCGACAGGCCGCCCCGCGCAGATGTTCGATCACGAGATCGGTACCGAGTCGAT
CGGCTCCGCGCAACTCGTCGTCACATACGGCCGCTAG

Upstream 100 bases:

>100_bases
CCTAATGCTAGACTTTCCGTCATCTTCGGATTCGAGCATCACATCTCGACCACGATCGGCGCCGGGCTCGCCCCGGCACA
ACTGACGGGAGAAGGGCCAT

Downstream 100 bases:

>100_bases
TCTGCCGCGAGGCGCGACCGCCGCGATTCGCTCCGTTCAGGAAATTCAGTCGTGCGCGACGGCGGTCGTCCGTGGCGTAT
CGCCCCGCTAGACTTTTTTC

Product: phosphatidylethanolamine-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MRVGRRVVPRGSSRRRLSLALACVLLFGPIGSSRALAEDAFTLTSDDLRPGGRVGAPHVFNQGDCKGGNRSPQLAWRNPP
PGTKGFAVTMFDPDAPGRGWWHWAVAGIPASVSSLPADASASGFLRKLGAVEARNDFGIDGYGGPCPPPGKPHRYVITVY
ALKATDLRVATGRPAQMFDHEIGTESIGSAQLVVTYGR

Sequences:

>Translated_198_residues
MRVGRRVVPRGSSRRRLSLALACVLLFGPIGSSRALAEDAFTLTSDDLRPGGRVGAPHVFNQGDCKGGNRSPQLAWRNPP
PGTKGFAVTMFDPDAPGRGWWHWAVAGIPASVSSLPADASASGFLRKLGAVEARNDFGIDGYGGPCPPPGKPHRYVITVY
ALKATDLRVATGRPAQMFDHEIGTESIGSAQLVVTYGR
>Mature_198_residues
MRVGRRVVPRGSSRRRLSLALACVLLFGPIGSSRALAEDAFTLTSDDLRPGGRVGAPHVFNQGDCKGGNRSPQLAWRNPP
PGTKGFAVTMFDPDAPGRGWWHWAVAGIPASVSSLPADASASGFLRKLGAVEARNDFGIDGYGGPCPPPGKPHRYVITVY
ALKATDLRVATGRPAQMFDHEIGTESIGSAQLVVTYGR

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=182, Percent_Identity=42.3076923076923, Blast_Score=146, Evalue=1e-36,
Organism=Escherichia coli, GI1786990, Length=155, Percent_Identity=41.2903225806452, Blast_Score=122, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 20992; Mature: 20992

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVGRRVVPRGSSRRRLSLALACVLLFGPIGSSRALAEDAFTLTSDDLRPGGRVGAPHVF
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCEEEECCCCCCCCCCCCCCCC
NQGDCKGGNRSPQLAWRNPPPGTKGFAVTMFDPDAPGRGWWHWAVAGIPASVSSLPADAS
CCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCHHCCCCCCC
ASGFLRKLGAVEARNDFGIDGYGGPCPPPGKPHRYVITVYALKATDLRVATGRPAQMFDH
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECEEEEECCCCHHHHHH
EIGTESIGSAQLVVTYGR
HCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MRVGRRVVPRGSSRRRLSLALACVLLFGPIGSSRALAEDAFTLTSDDLRPGGRVGAPHVF
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCEEEECCCCCCCCCCCCCCCC
NQGDCKGGNRSPQLAWRNPPPGTKGFAVTMFDPDAPGRGWWHWAVAGIPASVSSLPADAS
CCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCHHCCCCCCC
ASGFLRKLGAVEARNDFGIDGYGGPCPPPGKPHRYVITVYALKATDLRVATGRPAQMFDH
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECEEEEECCCCHHHHHH
EIGTESIGSAQLVVTYGR
HCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 11439028 [H]