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The map label for this gene is ynfL [C]

Identifier: 83719988

GI number: 83719988

Start: 920937

End: 921392

Strand: Direct

Name: ynfL [C]

Synonym: BTH_I0808

Alternate gene names: 83719988

Gene position: 920937-921392 (Clockwise)

Preceding gene: 83718827

Following gene: 83720688

Centisome position: 24.18

GC content: 58.99

Gene sequence:

>456_bases
ATGGGGCTAACGTTAATGGTAGCGGTGCCGGCTCGGCATCCGCTGCTGGCGCATAAATATTTGCCACTGGAAGAAGTGCT
GCACTACCCGTTGGTACTGGGCGACCCACACGCCTGCGAGGGCTTTGCTCGCCAAGTGGATCGTATTCTGCGCCGCGTGG
ATCGAGAGCCGATCGTTGCCGAATGGGTCGCATCCATCGACTTGATGATGGCCTTAGTGTCAGCAGGCTTCGCCTTGGGT
CTGGCGGGCACCTCGCAGATTGTGGCCAGCAGAGAGCCGGGTATCGTCGCACGGCCGCTGGCTGGACGCGCTCCCATGCT
CACGACCTATCTGCTGCGTTCCGACAATGAACCGTCGCAGGTGCTGGCTCGTTTCATTGAGCGAGTAAGCAATCTTGAAT
CACTTGCGGCAAAGAAGGCCGTCGTATCATTTGATCCCGACGCGAGGGAGGAATAG

Upstream 100 bases:

>100_bases
GACAACATATAACGACTCTGATGCGCGATCTGGCGAAAATTCCGGTCACGGCCAACCGGGTTCTGTCCTGCATCCGCAAG
ATGTTCAACATGGCCGAGGT

Downstream 100 bases:

>100_bases
CGCCGTGAAACCGATCATGCTGATTCTGCTCGTTGCATTGCTGACGGCCTGCGGCAAATCCAAGCCGACCGAAACGGTGG
ATTCCCTCGTAGCCAATCCC

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LysR Family; Transcriptional Regulator; LysR Family Regulatory Protein; LysR Regulatory Protein; Transcriptional Regulator LysR Family Protein; Transcriptional Regulator Lysr Family; BphR/TraR; Transcription Regulator Protein; Transcription Regulator; Regulatory Protein BphR

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MGLTLMVAVPARHPLLAHKYLPLEEVLHYPLVLGDPHACEGFARQVDRILRRVDREPIVAEWVASIDLMMALVSAGFALG
LAGTSQIVASREPGIVARPLAGRAPMLTTYLLRSDNEPSQVLARFIERVSNLESLAAKKAVVSFDPDAREE

Sequences:

>Translated_151_residues
MGLTLMVAVPARHPLLAHKYLPLEEVLHYPLVLGDPHACEGFARQVDRILRRVDREPIVAEWVASIDLMMALVSAGFALG
LAGTSQIVASREPGIVARPLAGRAPMLTTYLLRSDNEPSQVLARFIERVSNLESLAAKKAVVSFDPDAREE
>Mature_150_residues
GLTLMVAVPARHPLLAHKYLPLEEVLHYPLVLGDPHACEGFARQVDRILRRVDREPIVAEWVASIDLMMALVSAGFALGL
AGTSQIVASREPGIVARPLAGRAPMLTTYLLRSDNEPSQVLARFIERVSNLESLAAKKAVVSFDPDAREE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16521; Mature: 16389

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLTLMVAVPARHPLLAHKYLPLEEVLHYPLVLGDPHACEGFARQVDRILRRVDREPIVA
CCEEEEEECCCCCCHHHHHCCCHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHCCCCHHH
EWVASIDLMMALVSAGFALGLAGTSQIVASREPGIVARPLAGRAPMLTTYLLRSDNEPSQ
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEECCCCCCCHHHHHHHHHCCCCHHH
VLARFIERVSNLESLAAKKAVVSFDPDAREE
HHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
>Mature Secondary Structure 
GLTLMVAVPARHPLLAHKYLPLEEVLHYPLVLGDPHACEGFARQVDRILRRVDREPIVA
CEEEEEECCCCCCHHHHHCCCHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHCCCCHHH
EWVASIDLMMALVSAGFALGLAGTSQIVASREPGIVARPLAGRAPMLTTYLLRSDNEPSQ
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEECCCCCCCHHHHHHHHHCCCCHHH
VLARFIERVSNLESLAAKKAVVSFDPDAREE
HHHHHHHHHHHHHHHHHHHHHEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA