Click here to switch to the map view.

The map label for this gene is tadA [H]

Identifier: 83719984

GI number: 83719984

Start: 2335472

End: 2336056

Strand: Direct

Name: tadA [H]

Synonym: BTH_I2062

Alternate gene names: 83719984

Gene position: 2335472-2336056 (Clockwise)

Preceding gene: 83718545

Following gene: 83720894

Centisome position: 61.31

GC content: 73.85

Gene sequence:

>585_bases
GTGAGGCCCGCCGGCGCGCCCGTGTCCGGTGACGATTTCGACGACGAACCGCAATCGCCGCCTCTGTCCGCCGCCGCCGA
GCGCGACCGCCGCTACATGCGCATCGCGCTCGCCGCCGCCGAGGAGGCGCGCGCGGCGGGCGAAGTGCCGGTCGGCGCGG
TGATCGTGCGCGGCGACGAGGTGATTGCGCGCGGCTTCAACCACCCGATCGGCGGCCACGATCCGTCCGCTCACGCCGAG
ATGGCCGCGCTGCGCGCTGCCGCGCGCGCGCTGCGCAATTACCGGATGCCTGGCTGCGAGCTGTACGTGACGCTCGAGCC
GTGCCTGATGTGCTCGGGCGCGATCATGCACGCGCGGATCGCGCGCGTCGTGTTCGGCGCGCCCGACCCGAAGACGGGCG
CATGCGGCAGCGTCGTCGACGCGTTCGCGGATGCGCGCCTGAACCATCACACGACAGTCGAGGGCGGGGTGCTCGCCGAC
GAATGCGGCGCGGCGCTCAAGTCGTTCTTCGCGGAGCGGCGACAGGCGGTTCGCGAGGCGCGCCGCGCGCAGCAGGTGCC
CGACGTGCCGCCGCGCGACGAATGA

Upstream 100 bases:

>100_bases
GCGGCGGCCCGATGGTCGTGCCGCGGGAATACTGCCGTCGCATCGCTGAGCGTCTTTCCGAGCGCGTGCTCGGCGACGCG
CAGGGCGAAGCGGGGGCGAT

Downstream 100 bases:

>100_bases
ACCGGGCGGCGCGGGGCGCCTCTAACTACGTCCGATCGATTCTTCCTGCGAATTCATGATTTCCACGTCCCGCACGCCGC
GCACGATTCGTCTGCTTGCC

Product: cytidine/deoxycytidylate deaminase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MRPAGAPVSGDDFDDEPQSPPLSAAAERDRRYMRIALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAE
MAALRAAARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLAD
ECGAALKSFFAERRQAVREARRAQQVPDVPPRDE

Sequences:

>Translated_194_residues
MRPAGAPVSGDDFDDEPQSPPLSAAAERDRRYMRIALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAE
MAALRAAARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLAD
ECGAALKSFFAERRQAVREARRAQQVPDVPPRDE
>Mature_194_residues
MRPAGAPVSGDDFDDEPQSPPLSAAAERDRRYMRIALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAE
MAALRAAARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLAD
ECGAALKSFFAERRQAVREARRAQQVPDVPPRDE

Specific function: Deaminates adenosine-34 to inosine in tRNA-Arg2 [H]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI124107608, Length=159, Percent_Identity=33.3333333333333, Blast_Score=81, Evalue=5e-16,
Organism=Homo sapiens, GI19923945, Length=69, Percent_Identity=49.2753623188406, Blast_Score=64, Evalue=8e-11,
Organism=Escherichia coli, GI145693172, Length=157, Percent_Identity=51.5923566878981, Blast_Score=171, Evalue=4e-44,
Organism=Caenorhabditis elegans, GI17541138, Length=149, Percent_Identity=34.8993288590604, Blast_Score=83, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17554608, Length=98, Percent_Identity=36.734693877551, Blast_Score=80, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17555996, Length=96, Percent_Identity=36.4583333333333, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21355527, Length=145, Percent_Identity=38.6206896551724, Blast_Score=91, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 20622; Mature: 20622

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPAGAPVSGDDFDDEPQSPPLSAAAERDRRYMRIALAAAEEARAAGEVPVGAVIVRGDE
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCH
VIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLEPCLMCSGAIMHARI
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHH
ARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAALKSFFAERRQAVREA
HHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RRAQQVPDVPPRDE
HHHHCCCCCCCCCC
>Mature Secondary Structure
MRPAGAPVSGDDFDDEPQSPPLSAAAERDRRYMRIALAAAEEARAAGEVPVGAVIVRGDE
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCH
VIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLEPCLMCSGAIMHARI
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHH
ARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAALKSFFAERRQAVREA
HHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RRAQQVPDVPPRDE
HHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]