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The map label for this gene is petB [H]

Identifier: 83719787

GI number: 83719787

Start: 3419728

End: 3421110

Strand: Reverse

Name: petB [H]

Synonym: BTH_I2976

Alternate gene names: 83719787

Gene position: 3421110-3419728 (Counterclockwise)

Preceding gene: 83721085

Following gene: 83720309

Centisome position: 89.81

GC content: 61.89

Gene sequence:

>1383_bases
ATGGCGACCGACAACAAAGAGATCTCCACAACAGGCTTGCTCGGCTGGGTCGACCGGCGCTTTCCTCTTACTTCCACCTG
GAAGCAGCATCTTTCCGAGTATTACGCGCCGAAGAACTTCAACGTCTGGTATTTCTTCGGGTCGCTCGCGCTGCTCGTGC
TCGTCAACCAGATCGTCACCGGCATTTTCCTGACGATGAACTACAAGCCCGATTCGACGCTTGCGTTCGCGTCGGTCGAG
TACATCATGCGCGAGGTGCCGTGGGGCTGGCTCATCCGCTACATGCACTCGACGGGCGCGTCGATGTTCTTCGTCGTCGT
CTACCTGCACATGTTCCGCGGCCTGCTGTACGGCTCGTACCGCAAGCCGCGCGAACTCGTGTGGATCTTCGGCTGCGCGA
TCTTCCTGTGCCTGATGGCCGAGGCGTTCTTCGGCTACCTGCTGCCGTGGGGCCAGATGTCGTTCTGGGGCGCGCAGGTG
ATCGTGAACCTTTTCTCGGCGATTCCGTTCGTCGGTCCGGACCTGTCGCTGTGGATTCGCGGCGACTACGTCGTGTCCGA
CGTCACGCTGAACCGCTTCTTCGCGTTCCACGTGATCGCGATTCCGCTCGTGCTGCTGCTGCTCGTCGTCGCGCACCTGA
TCGCGCTGCACGAAGTGGGGTCGAACAACCCGGACGGCATCGAGATCAAGGAGAAGAAGGACGAGAAGGGCGTGCCGCTC
GACGGCATTCCGTTCCATCCGTACTACTCCGTGCACGATTTCTTCGGCGTTTGCGTGTTCCTAATGGTGTTCGCGCTGAT
CGTGTTCTTCATGCCGGAGATGGGCGGCTACTTCCTCGAGGCGAACAACTTCATCCCGGCGAATCCGCTGCAGACGCCGC
CCGAGATCGCGCCCGTCTGGTATTTCACCGCGTTCTACGCGATGCTGCGCGCAACGACCGACCCGTTCAAGATCGTGCTG
ATGATCGTGATCGCCGCGCTCGGCCTTCTCGCGCTCGTGCGCGCGCGCGGCAAGTGGAAGATCGCGCTGCCCGTGCTCGC
CGCGGCGCTCGTCGTCTTCATGTACTTCACCGAATCGAAGTTCTGGGGCGTCGTGGTGATGGGCGGGGCCGTCGTCACGC
TGTTCTTCCTGCCGTGGCTCGATCGCAGCCCGGTGAAGTCGATCCGCTACCGGCCGTTCTTTCACAAGGTGTTTTTCGGG
ATCTTCGTCGCCGTGTTTTTGACGCTCGCGTTCCTCGGCACGCGACCGCCTTCGCCCGCCGCGACGCTGATCGCCCAGGT
GTGCGCGCTCGTGTATTTCGCGTTCTTCCTCGGCATGCCGTTCTGGACGCGGCTCGGCACCTTCAAGCAGCCGCCCGAAC
GCGTGCGGTTCAAATCCCATTGA

Upstream 100 bases:

>100_bases
CAAGAACAAGCCGGCCCCGCAGAATCTGGACGTCCCGCCTTATATGTTCACGTCGGCCACGACGCTCGTGATCGGCAAGG
ACGAGAAAGGAGAAGCGTAA

Downstream 100 bases:

>100_bases
CGTGAGCGAAGGGGGAATTCGTATGAAGAAATTGCTTTCGACGCTCGCAATGTTTATTGTGTCGGCATGTCTGCTGACGA
GCGTATCCGTGCGGGCCCAA

Product: ubiquinol-cytochrome c reductase, cytochrome b

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 459

Protein sequence:

>460_residues
MATDNKEISTTGLLGWVDRRFPLTSTWKQHLSEYYAPKNFNVWYFFGSLALLVLVNQIVTGIFLTMNYKPDSTLAFASVE
YIMREVPWGWLIRYMHSTGASMFFVVVYLHMFRGLLYGSYRKPRELVWIFGCAIFLCLMAEAFFGYLLPWGQMSFWGAQV
IVNLFSAIPFVGPDLSLWIRGDYVVSDVTLNRFFAFHVIAIPLVLLLLVVAHLIALHEVGSNNPDGIEIKEKKDEKGVPL
DGIPFHPYYSVHDFFGVCVFLMVFALIVFFMPEMGGYFLEANNFIPANPLQTPPEIAPVWYFTAFYAMLRATTDPFKIVL
MIVIAALGLLALVRARGKWKIALPVLAAALVVFMYFTESKFWGVVVMGGAVVTLFFLPWLDRSPVKSIRYRPFFHKVFFG
IFVAVFLTLAFLGTRPPSPAATLIAQVCALVYFAFFLGMPFWTRLGTFKQPPERVRFKSH

Sequences:

>Translated_460_residues
MATDNKEISTTGLLGWVDRRFPLTSTWKQHLSEYYAPKNFNVWYFFGSLALLVLVNQIVTGIFLTMNYKPDSTLAFASVE
YIMREVPWGWLIRYMHSTGASMFFVVVYLHMFRGLLYGSYRKPRELVWIFGCAIFLCLMAEAFFGYLLPWGQMSFWGAQV
IVNLFSAIPFVGPDLSLWIRGDYVVSDVTLNRFFAFHVIAIPLVLLLLVVAHLIALHEVGSNNPDGIEIKEKKDEKGVPL
DGIPFHPYYSVHDFFGVCVFLMVFALIVFFMPEMGGYFLEANNFIPANPLQTPPEIAPVWYFTAFYAMLRATTDPFKIVL
MIVIAALGLLALVRARGKWKIALPVLAAALVVFMYFTESKFWGVVVMGGAVVTLFFLPWLDRSPVKSIRYRPFFHKVFFG
IFVAVFLTLAFLGTRPPSPAATLIAQVCALVYFAFFLGMPFWTRLGTFKQPPERVRFKSH
>Mature_459_residues
ATDNKEISTTGLLGWVDRRFPLTSTWKQHLSEYYAPKNFNVWYFFGSLALLVLVNQIVTGIFLTMNYKPDSTLAFASVEY
IMREVPWGWLIRYMHSTGASMFFVVVYLHMFRGLLYGSYRKPRELVWIFGCAIFLCLMAEAFFGYLLPWGQMSFWGAQVI
VNLFSAIPFVGPDLSLWIRGDYVVSDVTLNRFFAFHVIAIPLVLLLLVVAHLIALHEVGSNNPDGIEIKEKKDEKGVPLD
GIPFHPYYSVHDFFGVCVFLMVFALIVFFMPEMGGYFLEANNFIPANPLQTPPEIAPVWYFTAFYAMLRATTDPFKIVLM
IVIAALGLLALVRARGKWKIALPVLAAALVVFMYFTESKFWGVVVMGGAVVTLFFLPWLDRSPVKSIRYRPFFHKVFFGI
FVAVFLTLAFLGTRPPSPAATLIAQVCALVYFAFFLGMPFWTRLGTFKQPPERVRFKSH

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=402, Percent_Identity=38.5572139303483, Blast_Score=255, Evalue=5e-68,
Organism=Saccharomyces cerevisiae, GI6226529, Length=401, Percent_Identity=40.3990024937656, Blast_Score=248, Evalue=2e-66,
Organism=Saccharomyces cerevisiae, GI6226532, Length=241, Percent_Identity=48.1327800829876, Blast_Score=208, Evalue=2e-54,
Organism=Saccharomyces cerevisiae, GI6226531, Length=152, Percent_Identity=53.2894736842105, Blast_Score=152, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6226530, Length=137, Percent_Identity=48.9051094890511, Blast_Score=121, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00033 Cytochrom_B_N [H]

EC number: 1.10.2.2

Molecular weight: Translated: 52454; Mature: 52323

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS51002 CYTB_NTER ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHCCCCCC
>Mature Secondary Structure 
ATDNKEISTTGLLGWVDRRFPLTSTWKQHLSEYYAPKNFNVWYFFGSLALLVLVNQIVT
CCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHH
GIFLTMNYKPDSTLAFASVEYIMREVPWGWLIRYMHSTGASMFFVVVYLHMFRGLLYGSY
HHEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
RKPRELVWIFGCAIFLCLMAEAFFGYLLPWGQMSFWGAQVIVNLFSAIPFVGPDLSLWIR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEE
GDYVVSDVTLNRFFAFHVIAIPLVLLLLVVAHLIALHEVGSNNPDGIEIKEKKDEKGVPL
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCC
DGIPFHPYYSVHDFFGVCVFLMVFALIVFFMPEMGGYFLEANNFIPANPLQTPPEIAPVW
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHH
YFTAFYAMLRATTDPFKIVLMIVIAALGLLALVRARGKWKIALPVLAAALVVFMYFTESK
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCC
FWGVVVMGGAVVTLFFLPWLDRSPVKSIRYRPFFHKVFFGIFVAVFLTLAFLGTRPPSPA
CEEEEEEHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
ATLIAQVCALVYFAFFLGMPFWTRLGTFKQPPERVRFKSH
HHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA