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The map label for this gene is ydiU [C]

Identifier: 83719782

GI number: 83719782

Start: 2416942

End: 2418507

Strand: Reverse

Name: ydiU [C]

Synonym: BTH_I2140

Alternate gene names: 83719782

Gene position: 2418507-2416942 (Counterclockwise)

Preceding gene: 83720777

Following gene: 83721190

Centisome position: 63.49

GC content: 70.37

Gene sequence:

>1566_bases
ATGTCGTTTTCCAGAACCGAGGCCGCACCGGCCGCCACTCTCCCCGATCTCGCCGCGACGCTCGCCGCCCCGCGCGACGG
CGCGTTCCTGCAACTCGGCGCCGCGTTCCTCACGCGGCAGCCCGCCGCGCCGCTGCCCGCGCCGTACGTCGTCGGCTTCT
CCGACGATGCGGCGCGCATGCTCGGCCTCGATCCCGCGCTGCGCGACGCGCCCGGCTTCGCCGGGCTGTTCTGCGGCAAC
CCGACGCGCGACTGGCCGCAGGCATCACTGCCGTACGCGTCGGTTTACTCGGGCCACCAGTTCGGCGTATGGGCGGGCCA
GCTCGGCGACGGCCGCGCGCTCACGATCGGCGAGCTGGAACACGACGGCCGCCGCTACGAGCTGCAACTGAAGGGCGCGG
GCCGCACGCCGTACTCGCGCATGGGCGACGGCCGCGCGGTGCTGCGCTCGTCGATTCGCGAATACCTCTGCTCCGAGGCG
ATGCACCACCTCGGCATCCCGACGACGCGCGCGCTCGCCGTGATCGGCTCGGATCAGCCGGTGGTCCGCGAGGAAATCGA
AACGTCGGCGGTCGTCACGCGCGTCGCCGAGAGCTTCGTGCGCTTCGGCCATTTCGAGCACTTCTTCGCGAACGATCGTC
CCGAGCAGTTGCGCGCGCTCGCCGATCACGTGATCGACCGTTTCTATCCGGCATGCCGCGACGCCGACGACCCGTATCTC
GCGCTCCTCGCGGAAGCGACGCGGCGCACCGCGGAGCTCGTCGCGCAATGGCAGGCGGTCGGCTTCTGCCACGGCGTGAT
GAACACCGACAACATGTCGATCCTCGGCGTGACGATCGACTACGGCCCGTTCGGCTTCATCGACGCGTTCGACGCGAAGC
ACGTCTGCAACCATTCGGACACGCACGGCCGCTACGCGTACCGGATGCAGCCGCGCATCGCGCACTGGAACTGCTTCTGC
CTCGCACAGGCGCTGCTGCCGCTCATCGGTCTGCATCGCGACGCGCCGAGCGAAGACGCGCGCGCCGAGCGCGCGGTCGA
GGACGCGCACGCGGTGCTCGGGCGCTTTGCCGAGCAGTTCGGCCCCGCGCTCGAGCGCGCGATGCGCGCGAAGCTCGGCC
TCGAGCTCGAACGCGAAGGCGACGCGGCGCTCGCGAACCAGTTGCTCGAAATCATGGATGCGAGCCGCGCCGATTTCACG
CTGACGTTCCGCCATCTCGCGCGCGTGTCGAAGCACGACGCGCGCGGCGACGCGCCCGTGCGCGATCTCTTCGTCGATCG
CGACGCATTCGACCGCTGGGCGAACCTCTACCGCGCGCGCCTGTCGGAAGAAGCGCGCGACGACGCGGCACGCGCGGCCG
CGATGAACCGCGCGAACCCGAAATACGTGCTGCGCAACCACCTCGCGGAAACGGCAATCCGCCGCGCGAAGGAGAAGGAC
TTTTCAGAAGTCGAGCGTCTCGCGGCCGTGCTGCGGCGCCCGTTCGACGAGCAGCCGGAGCACGACGCGTACGCGGCGCT
GCCGCCCGACTGGGCGAGCACGCTCGAAGTGAGCTGCTCGTCGTGA

Upstream 100 bases:

>100_bases
CCGATACGGTCTGCTGCAAACGGCTCGACGGCGCGCGGGCGGCTTCGAGCGCCCCGCGCGGCGCGGACTTACAATATCGG
CTAACTTACCGGTCAGCAAC

Downstream 100 bases:

>100_bases
CGCCGCGGCCGGCGCGCCGCGCGATGCACGGCGCACGTTCCGCATGAATCATCAGGAGAATCGAGGATGTCAGGAGATCG
AGACGACAAGCGCTATCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 521; Mature: 520

Protein sequence:

>521_residues
MSFSRTEAAPAATLPDLAATLAAPRDGAFLQLGAAFLTRQPAAPLPAPYVVGFSDDAARMLGLDPALRDAPGFAGLFCGN
PTRDWPQASLPYASVYSGHQFGVWAGQLGDGRALTIGELEHDGRRYELQLKGAGRTPYSRMGDGRAVLRSSIREYLCSEA
MHHLGIPTTRALAVIGSDQPVVREEIETSAVVTRVAESFVRFGHFEHFFANDRPEQLRALADHVIDRFYPACRDADDPYL
ALLAEATRRTAELVAQWQAVGFCHGVMNTDNMSILGVTIDYGPFGFIDAFDAKHVCNHSDTHGRYAYRMQPRIAHWNCFC
LAQALLPLIGLHRDAPSEDARAERAVEDAHAVLGRFAEQFGPALERAMRAKLGLELEREGDAALANQLLEIMDASRADFT
LTFRHLARVSKHDARGDAPVRDLFVDRDAFDRWANLYRARLSEEARDDAARAAAMNRANPKYVLRNHLAETAIRRAKEKD
FSEVERLAAVLRRPFDEQPEHDAYAALPPDWASTLEVSCSS

Sequences:

>Translated_521_residues
MSFSRTEAAPAATLPDLAATLAAPRDGAFLQLGAAFLTRQPAAPLPAPYVVGFSDDAARMLGLDPALRDAPGFAGLFCGN
PTRDWPQASLPYASVYSGHQFGVWAGQLGDGRALTIGELEHDGRRYELQLKGAGRTPYSRMGDGRAVLRSSIREYLCSEA
MHHLGIPTTRALAVIGSDQPVVREEIETSAVVTRVAESFVRFGHFEHFFANDRPEQLRALADHVIDRFYPACRDADDPYL
ALLAEATRRTAELVAQWQAVGFCHGVMNTDNMSILGVTIDYGPFGFIDAFDAKHVCNHSDTHGRYAYRMQPRIAHWNCFC
LAQALLPLIGLHRDAPSEDARAERAVEDAHAVLGRFAEQFGPALERAMRAKLGLELEREGDAALANQLLEIMDASRADFT
LTFRHLARVSKHDARGDAPVRDLFVDRDAFDRWANLYRARLSEEARDDAARAAAMNRANPKYVLRNHLAETAIRRAKEKD
FSEVERLAAVLRRPFDEQPEHDAYAALPPDWASTLEVSCSS
>Mature_520_residues
SFSRTEAAPAATLPDLAATLAAPRDGAFLQLGAAFLTRQPAAPLPAPYVVGFSDDAARMLGLDPALRDAPGFAGLFCGNP
TRDWPQASLPYASVYSGHQFGVWAGQLGDGRALTIGELEHDGRRYELQLKGAGRTPYSRMGDGRAVLRSSIREYLCSEAM
HHLGIPTTRALAVIGSDQPVVREEIETSAVVTRVAESFVRFGHFEHFFANDRPEQLRALADHVIDRFYPACRDADDPYLA
LLAEATRRTAELVAQWQAVGFCHGVMNTDNMSILGVTIDYGPFGFIDAFDAKHVCNHSDTHGRYAYRMQPRIAHWNCFCL
AQALLPLIGLHRDAPSEDARAERAVEDAHAVLGRFAEQFGPALERAMRAKLGLELEREGDAALANQLLEIMDASRADFTL
TFRHLARVSKHDARGDAPVRDLFVDRDAFDRWANLYRARLSEEARDDAARAAAMNRANPKYVLRNHLAETAIRRAKEKDF
SEVERLAAVLRRPFDEQPEHDAYAALPPDWASTLEVSCSS

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family [H]

Homologues:

Organism=Homo sapiens, GI32880229, Length=492, Percent_Identity=42.8861788617886, Blast_Score=307, Evalue=2e-83,
Organism=Escherichia coli, GI1787999, Length=432, Percent_Identity=50.2314814814815, Blast_Score=418, Evalue=1e-118,
Organism=Saccharomyces cerevisiae, GI6325034, Length=396, Percent_Identity=33.0808080808081, Blast_Score=197, Evalue=3e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003846 [H]

Pfam domain/function: PF02696 UPF0061 [H]

EC number: NA

Molecular weight: Translated: 57597; Mature: 57466

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSRTEAAPAATLPDLAATLAAPRDGAFLQLGAAFLTRQPAAPLPAPYVVGFSDDAARM
CCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHH
LGLDPALRDAPGFAGLFCGNPTRDWPQASLPYASVYSGHQFGVWAGQLGDGRALTIGELE
HCCCHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCCCEEECCCCCCCEEEEECCC
HDGRRYELQLKGAGRTPYSRMGDGRAVLRSSIREYLCSEAMHHLGIPTTRALAVIGSDQP
CCCCEEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCCC
VVREEIETSAVVTRVAESFVRFGHFEHFFANDRPEQLRALADHVIDRFYPACRDADDPYL
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH
ALLAEATRRTAELVAQWQAVGFCHGVMNTDNMSILGVTIDYGPFGFIDAFDAKHVCNHSD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCHHHHCCCCC
THGRYAYRMQPRIAHWNCFCLAQALLPLIGLHRDAPSEDARAERAVEDAHAVLGRFAEQF
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GPALERAMRAKLGLELEREGDAALANQLLEIMDASRADFTLTFRHLARVSKHDARGDAPV
HHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCH
RDLFVDRDAFDRWANLYRARLSEEARDDAARAAAMNRANPKYVLRNHLAETAIRRAKEKD
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
FSEVERLAAVLRRPFDEQPEHDAYAALPPDWASTLEVSCSS
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHEEEECCC
>Mature Secondary Structure 
SFSRTEAAPAATLPDLAATLAAPRDGAFLQLGAAFLTRQPAAPLPAPYVVGFSDDAARM
CCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHH
LGLDPALRDAPGFAGLFCGNPTRDWPQASLPYASVYSGHQFGVWAGQLGDGRALTIGELE
HCCCHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCCCEEECCCCCCCEEEEECCC
HDGRRYELQLKGAGRTPYSRMGDGRAVLRSSIREYLCSEAMHHLGIPTTRALAVIGSDQP
CCCCEEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCCC
VVREEIETSAVVTRVAESFVRFGHFEHFFANDRPEQLRALADHVIDRFYPACRDADDPYL
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH
ALLAEATRRTAELVAQWQAVGFCHGVMNTDNMSILGVTIDYGPFGFIDAFDAKHVCNHSD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCHHHHCCCCC
THGRYAYRMQPRIAHWNCFCLAQALLPLIGLHRDAPSEDARAERAVEDAHAVLGRFAEQF
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GPALERAMRAKLGLELEREGDAALANQLLEIMDASRADFTLTFRHLARVSKHDARGDAPV
HHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCH
RDLFVDRDAFDRWANLYRARLSEEARDDAARAAAMNRANPKYVLRNHLAETAIRRAKEKD
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
FSEVERLAAVLRRPFDEQPEHDAYAALPPDWASTLEVSCSS
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA