Click here to switch to the map view.

The map label for this gene is glnS [H]

Identifier: 83719734

GI number: 83719734

Start: 3040780

End: 3042489

Strand: Direct

Name: glnS [H]

Synonym: BTH_I2665

Alternate gene names: 83719734

Gene position: 3040780-3042489 (Clockwise)

Preceding gene: 83720086

Following gene: 83718796

Centisome position: 79.83

GC content: 64.62

Gene sequence:

>1710_bases
ATGAGCACCGAACGCACCGACGCCACCGCGCCATCCAATTTCATCCGCAACATCATCGACGACGACAACCGCACGGGCAA
ATGGAGCGGCCGCGTCGAGACGCGCTTTCCGCCCGAGCCGAACGGCTATCTGCACATCGGCCATGCGAAGAGCATCTGCC
TGAACTTCAGCGTCGCGCGCGACTACGGCGGCGTGTGCCACCTGCGCTTCGACGACACGAATCCGGAAAAGGAAAGCGTC
GAGTACGTGAACTCGATCGTCGACGCGGTGCGCTGGCTCGGCTTCGACTGGCAAAAGGCCGGCGTTGACCATCAGTATTT
CGCGAGCGACTACTACGACAGGCTCTATGAATTCGCCGAACTGCTGATCCAGCGCGGCAAGGCGTACGTCGACAGCCAGA
GCGCCGACGAGATGCGCACGAACCGCGGCTCGCTGACCGAGCCGGGCACGCCGTCGCCGTTCCGCGACCGCTCGCCCGAC
GAAAGCCTCGACCTGTTCCGCAGGATGAAGGCGGGCGAATTCGGCGAAGGCGAGCATGTGCTGCGCGCGAAGATCGACAT
GAGCTCGCCGAACATGAACATGCGCGACCCGGTGATCTACCGGATTCGCTACGCGCATCACTACCGCACGGGCGACAAGT
GGTGCGTCTACCCGATGTACGACTACACGCACTGCATCTCGGACGCGCTCGAGGGCATCACGCACTCGCTGTGCACGCTC
GAATTCGAGGATCACCGCCCGCTCTACGACTGGGTGCTCAACGAGCTCGCCGACGCCGGCGTGTTCGCGCGGCCGCTGCC
GCAGCAAATCGAATTCTCGCGCCTGAACCTCACCTATGCGATCACGAGCAAGCGCAAATTGCTGCAGCTCGTGACGGAAG
GCCACGTCGACGGCTGGGACGATCCGCGGATGCCGACGATCGTCGGCGTGCGCCGCCGCGGCTTCACGCCGGAGAGCATC
CAGCTCTTCTGCGAGCGGATCGGCGTGACGAAGGTCGATTCGTGGATCGACATGAGCGTGTTCGAAGGCGCGCTGCGCGA
CGACCTCGACGACAAGGCGCCGCGCACGGTGGCCGTGCTCGATCCGCTCAAGCTCGTCATCGACAACTATCCGGAAGGTC
AGACCGAGGAATGCACGGCGCCCGTGCACCCGCACCATCCGGAGCGCGGCCAGCGCGCGTTCCCGATCTCGCGCGAGCTG
TGGATCGAGCGCGAGGATTTCAACGAGAATCCGCCGAAGGGCTATTTCCGGCTGTTCCCGGGCAACAAGGTGCGGCTGCG
CTACGGCTACGTGATCGAATGCACGGGCGCGGACAAGGACGAGCACGGCAACGTGACCGCCGTTCACTGCAACTACTATC
CGGACAGCAAGTCGGGCACCGAGGGCGCGAACAACTACAAGGTCAAGGGCAACATCCATTGGGTGAGCGCCGCGCACGCG
TGCCCGGCCGAAGTGCGGATCTACGATCGCCTGTTCAAGGAGCCGCATCCGGACGCGGGCGGCCGCAACTTCCTCGAGGC
GCTGAATCCGGATTCGAAGAAGATCGTCCAGGCCTATCTCGAGCCGGGCGCGCGCGATGCGCTGCCGGAAGCGCGCTATC
AGTTCGAGCGGCACGGCTATTTCGTCGCCGATCGCGTCGATTCGAAGCCCGGCCAGCCGGTGTTCAACCGAATCGTCGGC
CTGCGCGACAGCTGGGGCAAACCGGCCTGA

Upstream 100 bases:

>100_bases
CGCAAGGGGCCGCGCTCCTCAGGACGCCCGTCCGTCAGGTAGAATTGACGAATTCGGGCGGCGCGGCACGCGTCCCCTCC
CCTTTTCTTCCCTGTTCCGC

Downstream 100 bases:

>100_bases
CGTCCGGAGCGCGGGGTCGCCCGCGCGATGGCGGCGCCGAAAAGGAAATGCCCGGTTCAAGCCGGGCATTTTCGTTTGAT
GCCCGCGTCGGTGCGGCGAG

Product: glutaminyl-tRNA synthetase

Products: NA

Alternate protein names: Glutamine--tRNA ligase; GlnRS [H]

Number of amino acids: Translated: 569; Mature: 568

Protein sequence:

>569_residues
MSTERTDATAPSNFIRNIIDDDNRTGKWSGRVETRFPPEPNGYLHIGHAKSICLNFSVARDYGGVCHLRFDDTNPEKESV
EYVNSIVDAVRWLGFDWQKAGVDHQYFASDYYDRLYEFAELLIQRGKAYVDSQSADEMRTNRGSLTEPGTPSPFRDRSPD
ESLDLFRRMKAGEFGEGEHVLRAKIDMSSPNMNMRDPVIYRIRYAHHYRTGDKWCVYPMYDYTHCISDALEGITHSLCTL
EFEDHRPLYDWVLNELADAGVFARPLPQQIEFSRLNLTYAITSKRKLLQLVTEGHVDGWDDPRMPTIVGVRRRGFTPESI
QLFCERIGVTKVDSWIDMSVFEGALRDDLDDKAPRTVAVLDPLKLVIDNYPEGQTEECTAPVHPHHPERGQRAFPISREL
WIEREDFNENPPKGYFRLFPGNKVRLRYGYVIECTGADKDEHGNVTAVHCNYYPDSKSGTEGANNYKVKGNIHWVSAAHA
CPAEVRIYDRLFKEPHPDAGGRNFLEALNPDSKKIVQAYLEPGARDALPEARYQFERHGYFVADRVDSKPGQPVFNRIVG
LRDSWGKPA

Sequences:

>Translated_569_residues
MSTERTDATAPSNFIRNIIDDDNRTGKWSGRVETRFPPEPNGYLHIGHAKSICLNFSVARDYGGVCHLRFDDTNPEKESV
EYVNSIVDAVRWLGFDWQKAGVDHQYFASDYYDRLYEFAELLIQRGKAYVDSQSADEMRTNRGSLTEPGTPSPFRDRSPD
ESLDLFRRMKAGEFGEGEHVLRAKIDMSSPNMNMRDPVIYRIRYAHHYRTGDKWCVYPMYDYTHCISDALEGITHSLCTL
EFEDHRPLYDWVLNELADAGVFARPLPQQIEFSRLNLTYAITSKRKLLQLVTEGHVDGWDDPRMPTIVGVRRRGFTPESI
QLFCERIGVTKVDSWIDMSVFEGALRDDLDDKAPRTVAVLDPLKLVIDNYPEGQTEECTAPVHPHHPERGQRAFPISREL
WIEREDFNENPPKGYFRLFPGNKVRLRYGYVIECTGADKDEHGNVTAVHCNYYPDSKSGTEGANNYKVKGNIHWVSAAHA
CPAEVRIYDRLFKEPHPDAGGRNFLEALNPDSKKIVQAYLEPGARDALPEARYQFERHGYFVADRVDSKPGQPVFNRIVG
LRDSWGKPA
>Mature_568_residues
STERTDATAPSNFIRNIIDDDNRTGKWSGRVETRFPPEPNGYLHIGHAKSICLNFSVARDYGGVCHLRFDDTNPEKESVE
YVNSIVDAVRWLGFDWQKAGVDHQYFASDYYDRLYEFAELLIQRGKAYVDSQSADEMRTNRGSLTEPGTPSPFRDRSPDE
SLDLFRRMKAGEFGEGEHVLRAKIDMSSPNMNMRDPVIYRIRYAHHYRTGDKWCVYPMYDYTHCISDALEGITHSLCTLE
FEDHRPLYDWVLNELADAGVFARPLPQQIEFSRLNLTYAITSKRKLLQLVTEGHVDGWDDPRMPTIVGVRRRGFTPESIQ
LFCERIGVTKVDSWIDMSVFEGALRDDLDDKAPRTVAVLDPLKLVIDNYPEGQTEECTAPVHPHHPERGQRAFPISRELW
IEREDFNENPPKGYFRLFPGNKVRLRYGYVIECTGADKDEHGNVTAVHCNYYPDSKSGTEGANNYKVKGNIHWVSAAHAC
PAEVRIYDRLFKEPHPDAGGRNFLEALNPDSKKIVQAYLEPGARDALPEARYQFERHGYFVADRVDSKPGQPVFNRIVGL
RDSWGKPA

Specific function: Unknown

COG id: COG0008

COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Homo sapiens, GI4826960, Length=545, Percent_Identity=45.5045871559633, Blast_Score=433, Evalue=1e-121,
Organism=Homo sapiens, GI62241042, Length=533, Percent_Identity=35.0844277673546, Blast_Score=266, Evalue=5e-71,
Organism=Escherichia coli, GI1786895, Length=558, Percent_Identity=56.989247311828, Blast_Score=645, Evalue=0.0,
Organism=Escherichia coli, GI1788743, Length=99, Percent_Identity=32.3232323232323, Blast_Score=74, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17543332, Length=544, Percent_Identity=43.0147058823529, Blast_Score=400, Evalue=1e-111,
Organism=Caenorhabditis elegans, GI17511007, Length=528, Percent_Identity=31.6287878787879, Blast_Score=230, Evalue=1e-60,
Organism=Saccharomyces cerevisiae, GI6324742, Length=578, Percent_Identity=41.522491349481, Blast_Score=412, Evalue=1e-116,
Organism=Saccharomyces cerevisiae, GI6321192, Length=529, Percent_Identity=32.8922495274102, Blast_Score=255, Evalue=1e-68,
Organism=Drosophila melanogaster, GI17864488, Length=551, Percent_Identity=42.1052631578947, Blast_Score=412, Evalue=1e-115,
Organism=Drosophila melanogaster, GI24649466, Length=425, Percent_Identity=36.7058823529412, Blast_Score=240, Evalue=2e-63,

Paralogues:

None

Copy number: 520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 1200 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001412
- InterPro:   IPR004514
- InterPro:   IPR022861
- InterPro:   IPR000924
- InterPro:   IPR020061
- InterPro:   IPR020058
- InterPro:   IPR020059
- InterPro:   IPR020056
- InterPro:   IPR011035
- InterPro:   IPR014729 [H]

Pfam domain/function: PF00749 tRNA-synt_1c; PF03950 tRNA-synt_1c_C [H]

EC number: =6.1.1.18 [H]

Molecular weight: Translated: 65196; Mature: 65064

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTERTDATAPSNFIRNIIDDDNRTGKWSGRVETRFPPEPNGYLHIGHAKSICLNFSVAR
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCEEEECCCCEEEEEEEEEC
DYGGVCHLRFDDTNPEKESVEYVNSIVDAVRWLGFDWQKAGVDHQYFASDYYDRLYEFAE
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHH
LLIQRGKAYVDSQSADEMRTNRGSLTEPGTPSPFRDRSPDESLDLFRRMKAGEFGEGEHV
HHHHCCCHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEE
LRAKIDMSSPNMNMRDPVIYRIRYAHHYRTGDKWCVYPMYDYTHCISDALEGITHSLCTL
EEEEEECCCCCCCCCCCEEEEEEEHHEECCCCCEEEEECHHHHHHHHHHHHHHHHHHEEE
EFEDHRPLYDWVLNELADAGVFARPLPQQIEFSRLNLTYAITSKRKLLQLVTEGHVDGWD
EECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHCCCCCCC
DPRMPTIVGVRRRGFTPESIQLFCERIGVTKVDSWIDMSVFEGALRDDLDDKAPRTVAVL
CCCCCCEEEHHHCCCCHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHCCCCCCCCCEEEEC
DPLKLVIDNYPEGQTEECTAPVHPHHPERGQRAFPISRELWIEREDFNENPPKGYFRLFP
CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEECCCCCCCCCCCEEEECC
GNKVRLRYGYVIECTGADKDEHGNVTAVHCNYYPDSKSGTEGANNYKVKGNIHWVSAAHA
CCEEEEEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEECCCC
CPAEVRIYDRLFKEPHPDAGGRNFLEALNPDSKKIVQAYLEPGARDALPEARYQFERHGY
CCHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCE
FVADRVDSKPGQPVFNRIVGLRDSWGKPA
EEEECCCCCCCCHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
STERTDATAPSNFIRNIIDDDNRTGKWSGRVETRFPPEPNGYLHIGHAKSICLNFSVAR
CCCCCCCCCHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCEEEECCCCEEEEEEEEEC
DYGGVCHLRFDDTNPEKESVEYVNSIVDAVRWLGFDWQKAGVDHQYFASDYYDRLYEFAE
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHH
LLIQRGKAYVDSQSADEMRTNRGSLTEPGTPSPFRDRSPDESLDLFRRMKAGEFGEGEHV
HHHHCCCHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEE
LRAKIDMSSPNMNMRDPVIYRIRYAHHYRTGDKWCVYPMYDYTHCISDALEGITHSLCTL
EEEEEECCCCCCCCCCCEEEEEEEHHEECCCCCEEEEECHHHHHHHHHHHHHHHHHHEEE
EFEDHRPLYDWVLNELADAGVFARPLPQQIEFSRLNLTYAITSKRKLLQLVTEGHVDGWD
EECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHCCCCCCC
DPRMPTIVGVRRRGFTPESIQLFCERIGVTKVDSWIDMSVFEGALRDDLDDKAPRTVAVL
CCCCCCEEEHHHCCCCHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHCCCCCCCCCEEEEC
DPLKLVIDNYPEGQTEECTAPVHPHHPERGQRAFPISRELWIEREDFNENPPKGYFRLFP
CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEECCCCCCCCCCCEEEECC
GNKVRLRYGYVIECTGADKDEHGNVTAVHCNYYPDSKSGTEGANNYKVKGNIHWVSAAHA
CCEEEEEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEECCCC
CPAEVRIYDRLFKEPHPDAGGRNFLEALNPDSKKIVQAYLEPGARDALPEARYQFERHGY
CCHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCE
FVADRVDSKPGQPVFNRIVGLRDSWGKPA
EEEECCCCCCCCHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA