| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83719718
Identifier: 83719718
GI number: 83719718
Start: 1523033
End: 1524205
Strand: Reverse
Name: 83719718
Synonym: BTH_I1347
Alternate gene names: NA
Gene position: 1524205-1523033 (Counterclockwise)
Preceding gene: 83720241
Following gene: 83718854
Centisome position: 40.01
GC content: 68.12
Gene sequence:
>1173_bases ATGACAACCCGCTGGATGCTGGCCTGCCTGTTCTGCGCGTGCGTCGTTGCATCGTCGGCCGCGCAAGTGCCGCCCGCCGC GCCGCCCGGCCACATCGTCGCGCACAGCGCGGCCGCGACGCGCGTGTTCCTCGGTTCGCCGTCGCTCGCGATCCTGCCTG ACGGCACCTACGTCGCGTCGCACGACATGTTCGGCCCGGCCGCGCTGCCCGACGAAGTGCACGTGTTCGCGTCGCACGAC AAGGGGCTGACCTGGGAAAAGCTGAGCGTCGTGACCGGCCAATACTGGTCGTCGCTCTTCGTCGTCGACGGCGCGCTCTA CCTGATGGGCACCGATCGCTCGATGGGCACTCCGGTGATCCGCCGCTCGATCGACGGCGGCGCGACGTGGACGACGCCGA GCGATGCGCTGACCGGACGCTTCGACGTGAGCGGCCGCTACATCACCGCGCCCGTGCCGGTGCTCGTCGAGCGCGGCCGC GTATGGCGCGCGTTCGAAGTGATCGAAGGCGGCGACCTGCGCTCGCTCGTGATGTCCGCGCCCGCCGACGGCGATCTGCT CGACACGCGCAACTGGCGCGCGACGAAGCCGCTGCCGTCCGACCATGCGTGGCTCGACAACAACTTCCTGACGTGGGAAG AAGGCAGCGTCGTCGCGACGGCCGATCGCGAGCCGGCCGTCGTGCTGCGCGTGAACACGAAGCACGGTCCGGAGAAGGTC GCGCTCGTTCACATGCAGGCGGACGGCTTATCGCTGTCGTTCGATCCGTCGCACGATTTCATCGATTTTCCCGGCGGCGG CAAGAAGTTCACGATCCGGTTCGATGCGCGCTCGGGCCGCTACTGGTCGCTCGCGAACGCGGTGCCGAACGCCGACGGCA GCGCGAATCTCGAGCGCGTGAGAAACACGCTCGCGCTGACGTCGTCGCCCGACCTGCGCCACTGGAGCGTCGAGCGCGTG CTGCTGCAAAGCGCCGATGCGCAACGGCACGGCTTCCAGTACGCGGATTGGCAATTCGAAGGCGACGACATCGTCGCGGT CGTGCGCATGGCGTTCGACGACGGCGAAGGCGGTGCGCACAGCCAGCATGATTCGAACTACGTGACGTTCTTGCGGGTGC GCGATTTCAGGCACGCGGAGGCGAACGAGCGCGACCAGGCCGCTTCGGATTGA
Upstream 100 bases:
>100_bases CGAACGGCCTGGTACCGGTACCGGCTGGCTGAGCGCGACCGGAGCATCGGGCCCCTAGCGTTTGTCGCGCACACGCGCCG ATACGCAAAGGAGAATGTCG
Downstream 100 bases:
>100_bases CGGCCGCGATACGCAAGCTGCGATATGCGGGCCGCGATGCGGGCGCCGGAGCGCGATACGATGCGATCCGGTTCGGCAAT ACGAAGCAGCGGCGCGGCGC
Product: periplasmic protein
Products: NA
Alternate protein names: BNR Repeat-Containing Glycosyl Hydrolase; Glycosyl Hydrolase; BNR/Asp-Box Repeat Protein
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MTTRWMLACLFCACVVASSAAQVPPAAPPGHIVAHSAAATRVFLGSPSLAILPDGTYVASHDMFGPAALPDEVHVFASHD KGLTWEKLSVVTGQYWSSLFVVDGALYLMGTDRSMGTPVIRRSIDGGATWTTPSDALTGRFDVSGRYITAPVPVLVERGR VWRAFEVIEGGDLRSLVMSAPADGDLLDTRNWRATKPLPSDHAWLDNNFLTWEEGSVVATADREPAVVLRVNTKHGPEKV ALVHMQADGLSLSFDPSHDFIDFPGGGKKFTIRFDARSGRYWSLANAVPNADGSANLERVRNTLALTSSPDLRHWSVERV LLQSADAQRHGFQYADWQFEGDDIVAVVRMAFDDGEGGAHSQHDSNYVTFLRVRDFRHAEANERDQAASD
Sequences:
>Translated_390_residues MTTRWMLACLFCACVVASSAAQVPPAAPPGHIVAHSAAATRVFLGSPSLAILPDGTYVASHDMFGPAALPDEVHVFASHD KGLTWEKLSVVTGQYWSSLFVVDGALYLMGTDRSMGTPVIRRSIDGGATWTTPSDALTGRFDVSGRYITAPVPVLVERGR VWRAFEVIEGGDLRSLVMSAPADGDLLDTRNWRATKPLPSDHAWLDNNFLTWEEGSVVATADREPAVVLRVNTKHGPEKV ALVHMQADGLSLSFDPSHDFIDFPGGGKKFTIRFDARSGRYWSLANAVPNADGSANLERVRNTLALTSSPDLRHWSVERV LLQSADAQRHGFQYADWQFEGDDIVAVVRMAFDDGEGGAHSQHDSNYVTFLRVRDFRHAEANERDQAASD >Mature_389_residues TTRWMLACLFCACVVASSAAQVPPAAPPGHIVAHSAAATRVFLGSPSLAILPDGTYVASHDMFGPAALPDEVHVFASHDK GLTWEKLSVVTGQYWSSLFVVDGALYLMGTDRSMGTPVIRRSIDGGATWTTPSDALTGRFDVSGRYITAPVPVLVERGRV WRAFEVIEGGDLRSLVMSAPADGDLLDTRNWRATKPLPSDHAWLDNNFLTWEEGSVVATADREPAVVLRVNTKHGPEKVA LVHMQADGLSLSFDPSHDFIDFPGGGKKFTIRFDARSGRYWSLANAVPNADGSANLERVRNTLALTSSPDLRHWSVERVL LQSADAQRHGFQYADWQFEGDDIVAVVRMAFDDGEGGAHSQHDSNYVTFLRVRDFRHAEANERDQAASD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42589; Mature: 42458
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRWMLACLFCACVVASSAAQVPPAAPPGHIVAHSAAATRVFLGSPSLAILPDGTYVAS CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEEECCCCEEEEECCCEEEC HDMFGPAALPDEVHVFASHDKGLTWEKLSVVTGQYWSSLFVVDGALYLMGTDRSMGTPVI CCCCCCCCCCCCEEEEEECCCCCCCHHHEEEHHHHHHEEEEECCEEEEEECCCCCCCHHH RRSIDGGATWTTPSDALTGRFDVSGRYITAPVPVLVERGRVWRAFEVIEGGDLRSLVMSA HCCCCCCEEECCCCCCCEEEEECCCCEEECCHHHHCCCCCEEEEEEEECCCCHHHHHCCC PADGDLLDTRNWRATKPLPSDHAWLDNNFLTWEEGSVVATADREPAVVLRVNTKHGPEKV CCCCCEECCCCCEECCCCCCCCCEECCCEEEECCCCEEEECCCCCEEEEEEECCCCCCEE ALVHMQADGLSLSFDPSHDFIDFPGGGKKFTIRFDARSGRYWSLANAVPNADGSANLERV EEEEEECCCEEEEECCCCCEEECCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCHHHHH RNTLALTSSPDLRHWSVERVLLQSADAQRHGFQYADWQFEGDDIVAVVRMAFDDGEGGAH HHHEEECCCCCCCHHHHHHHHHHCCCHHHCCCEEECEEECCCCEEEEEEEEEECCCCCCC SQHDSNYVTFLRVRDFRHAEANERDQAASD CCCCCCEEEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure TTRWMLACLFCACVVASSAAQVPPAAPPGHIVAHSAAATRVFLGSPSLAILPDGTYVAS CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEEECCCCEEEEECCCEEEC HDMFGPAALPDEVHVFASHDKGLTWEKLSVVTGQYWSSLFVVDGALYLMGTDRSMGTPVI CCCCCCCCCCCCEEEEEECCCCCCCHHHEEEHHHHHHEEEEECCEEEEEECCCCCCCHHH RRSIDGGATWTTPSDALTGRFDVSGRYITAPVPVLVERGRVWRAFEVIEGGDLRSLVMSA HCCCCCCEEECCCCCCCEEEEECCCCEEECCHHHHCCCCCEEEEEEEECCCCHHHHHCCC PADGDLLDTRNWRATKPLPSDHAWLDNNFLTWEEGSVVATADREPAVVLRVNTKHGPEKV CCCCCEECCCCCEECCCCCCCCCEECCCEEEECCCCEEEECCCCCEEEEEEECCCCCCEE ALVHMQADGLSLSFDPSHDFIDFPGGGKKFTIRFDARSGRYWSLANAVPNADGSANLERV EEEEEECCCEEEEECCCCCEEECCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCHHHHH RNTLALTSSPDLRHWSVERVLLQSADAQRHGFQYADWQFEGDDIVAVVRMAFDDGEGGAH HHHEEECCCCCCCHHHHHHHHHHCCCHHHCCCEEECEEECCCCEEEEEEEEEECCCCCCC SQHDSNYVTFLRVRDFRHAEANERDQAASD CCCCCCEEEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA