| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is lon [H]
Identifier: 83719717
GI number: 83719717
Start: 2395065
End: 2397485
Strand: Direct
Name: lon [H]
Synonym: BTH_I2122
Alternate gene names: 83719717
Gene position: 2395065-2397485 (Clockwise)
Preceding gene: 83721081
Following gene: 83721437
Centisome position: 62.88
GC content: 63.86
Gene sequence:
>2421_bases ATGTCAGGCACCCAACTTCTCCCGTCGGAACGCACTACGCTCCCGCTGCTGCCGCTGCGGGATGTCGTCGTTTTCCCGCA CATGGTGATTCCGCTCTTCGTGGGCCGGCCGAAGTCGATCAAGGCCCTCGAAGTGGCGATGGAAGGCGGCAAGCACATCA TGCTCGTCGCGCAGAAGACCGCCGCGAAGGATGAGCCGACCGAAAAGGACATGTACGACGTCGGCTGCATCGCGAACATC CTGCAGATGCTGAAGCTGCCCGACGGCACCGTGAAGGTGCTCGTCGAGGGCTTGCAGCGCGCGCAGGCGCTGTCGATCGA GGAGCAGGAGACGCAGTTCTCGTGCGAGGTGATGCCGCTCGAACCGGACCACGCCGACAGCGCCGAAACCGAGGCGCTGC GCCGCGCGATCGTGTCGCAGTTCGATCAGTACGTGAAACTGAACAAGAAGATTCCGCCCGAGATCCTGACGTCGCTGTCG GGTATCGACGAGGCGGGCCGCCTTGCCGACACGATCGCCGCGCATCTGCCGCTGAAGCTCGATCAGAAGCAGCACATCCT CGAGATGTTCCCGGTCATCGAGCGTCTCGAGCACCTGCTCGCGCAGCTCGAGGCCGAGATCGACATTCTGCAGGTCGAAA AGCGCATCCGCGGGCGCGTGAAGCGCCAGATGGAAAAGAGCCAGCGCGAGTACTACCTGAACGAGCAGGTCAAGGCGATC CAGAAGGAACTGGGCGAGGGCGAGGAAGGCGCGGATCTCGAGGAGCTCGAGAAGCGCATCAACGCCGCGCGCATGCCGAA GGAAGCGAAGAAGAAGGCCGATGCCGAGCTCAAGAAGCTGAAGCTGATGTCGCCGATGTCGGCCGAGGCGACCGTCGTAC GCAACTACATCGACACGCTGATCGCGCTGCCGTGGCGCAAGAAGAGCAAGGTCAACAATGATCTGTCGAACGCCGAGAAG GTGCTCGACGAGGATCACTACGGCCTTGAGAAGGTCAAGGAACGGATCCTCGAGTATCTTGCGGTGCAGCAACGCGTCGA CAAGGTGAAGGCGCCGATCCTCTGCCTCGTCGGGCCTCCGGGCGTCGGCAAGACCTCGCTCGGCCAGTCGATCGCGCGCG CGACGAACCGCAAGTTCGTCCGGATGGCGCTGGGCGGCGTGCGTGACGAGGCCGAGATCCGCGGTCACCGCCGAACCTAC ATCGGTTCGATGCCGGGCAAGATCCTGCAGAGCCTGTCGAAGGTCGGTGTGCGCAATCCGCTCTTCCTGCTCGACGAAGT CGACAAGATGGGGATGGATTTCCGCGGCGATCCGTCGTCGGCGCTGCTCGAAGTGCTCGATCCGGAGCAGAACCACACGT TCGCCGACCACTACGTCGAGGTCGATTTCGACCTGTCGGACGTGATGTTCGTCGCGACGTCGAACTCGCTGAACATTCCG CCGCCGCTGCTCGACCGGATGGAAGTGATCCGCCTGTCGGGTTATACCGAGGACGAGAAGGTCAGTATCGCGCAGCGCTA CCTGCTGCCGAAGCAGAAGAAGAACAACGGCCTGAAGGAAGGCGAGATCGAGGTTGCCGAGCAGGCGATCCGCGACATCA TCCGCTACTACACGCGCGAAGCCGGTGTGCGTTCGCTCGAGCGCGAGGTGTCGAAGATCTGCCGCAAGGTCGTGAAGATG CTGCTGCTGAAGAAGGCATCGGGCGCGATCAAGGTCGACGGCGAGAACCTCGACACGTTCCTCGGCGTGCGCAAGTACGA CTTCGGTCTTGCCGCGAAGGAGAACCAGGTCGGTCAGGTCACGGGTCTCGCATGGACCGAAGTGGGCGGCGATCTGCTGA CGATCGAGGCGGCCGTGATGCCCGGCAAGGGCAACGTGATCCGCACGGGCTCGCTTGGCGACGTGATGAAGGAATCGGTC GAGGCCGCGCGCTCGGTCGTGCGCTCGCGCTCGCGCCGGCTCGGCATCAAGGATGAGGCGTTCGAGAAGCAGGACATCCA CATCCACGTGCCGGAAGGCGCGACGCCGAAGGACGGTCCGTCCGCCGGCATCGCGATGACGACGGCGCTCGTGTCGGTGC TCACGGGCATTCCGGTGCGCGCCGACGTCGCGATGACGGGCGAGATCACGCTGCGCGGCGAAGTGCTGCCGATCGGCGGG CTGAAGGAGAAGCTGCTCGCCGCGCACCGCGGCGGCATCAAGCTCGTGCTGATTCCGGAAGAGAACGTGAAGGATCTCGC TGACATTCCGGACAACGTGAAGAACGCGATCGAAATCGTGCCGGTCCGCTGGATCGACAAGGTGCTCGAACTCGCGCTCG AACGTCTGCCGAATGCGCTGCCCGAGGAAGAGGCGAAGGCGGCGGCGCCTGTCGCGGAACCCGCGAAGGATGCCGGCTCG ACGGAAGTCGTCAAGCACTGA
Upstream 100 bases:
>100_bases GGTAACTTTTTTACTGAATATTTCCCACGCGCTGAAGGCTTGCAATCCGCTGTGCCGGCCTTACTTACCGAACAATTGAT TCCACTCATGGGGAAATGAA
Downstream 100 bases:
>100_bases GCGCACGCGCAAGCGCTTGCGTGTCCTCGCGAACAAGCCCACGGCCGAGAGGCCGTGGGCTTTGTTTTTGCACGGGGCGA CGGGTTGGCGGCGGTGTTGT
Product: ATP-dependent protease La
Products: NA
Alternate protein names: ATP-dependent protease La [H]
Number of amino acids: Translated: 806; Mature: 805
Protein sequence:
>806_residues MSGTQLLPSERTTLPLLPLRDVVVFPHMVIPLFVGRPKSIKALEVAMEGGKHIMLVAQKTAAKDEPTEKDMYDVGCIANI LQMLKLPDGTVKVLVEGLQRAQALSIEEQETQFSCEVMPLEPDHADSAETEALRRAIVSQFDQYVKLNKKIPPEILTSLS GIDEAGRLADTIAAHLPLKLDQKQHILEMFPVIERLEHLLAQLEAEIDILQVEKRIRGRVKRQMEKSQREYYLNEQVKAI QKELGEGEEGADLEELEKRINAARMPKEAKKKADAELKKLKLMSPMSAEATVVRNYIDTLIALPWRKKSKVNNDLSNAEK VLDEDHYGLEKVKERILEYLAVQQRVDKVKAPILCLVGPPGVGKTSLGQSIARATNRKFVRMALGGVRDEAEIRGHRRTY IGSMPGKILQSLSKVGVRNPLFLLDEVDKMGMDFRGDPSSALLEVLDPEQNHTFADHYVEVDFDLSDVMFVATSNSLNIP PPLLDRMEVIRLSGYTEDEKVSIAQRYLLPKQKKNNGLKEGEIEVAEQAIRDIIRYYTREAGVRSLEREVSKICRKVVKM LLLKKASGAIKVDGENLDTFLGVRKYDFGLAAKENQVGQVTGLAWTEVGGDLLTIEAAVMPGKGNVIRTGSLGDVMKESV EAARSVVRSRSRRLGIKDEAFEKQDIHIHVPEGATPKDGPSAGIAMTTALVSVLTGIPVRADVAMTGEITLRGEVLPIGG LKEKLLAAHRGGIKLVLIPEENVKDLADIPDNVKNAIEIVPVRWIDKVLELALERLPNALPEEEAKAAAPVAEPAKDAGS TEVVKH
Sequences:
>Translated_806_residues MSGTQLLPSERTTLPLLPLRDVVVFPHMVIPLFVGRPKSIKALEVAMEGGKHIMLVAQKTAAKDEPTEKDMYDVGCIANI LQMLKLPDGTVKVLVEGLQRAQALSIEEQETQFSCEVMPLEPDHADSAETEALRRAIVSQFDQYVKLNKKIPPEILTSLS GIDEAGRLADTIAAHLPLKLDQKQHILEMFPVIERLEHLLAQLEAEIDILQVEKRIRGRVKRQMEKSQREYYLNEQVKAI QKELGEGEEGADLEELEKRINAARMPKEAKKKADAELKKLKLMSPMSAEATVVRNYIDTLIALPWRKKSKVNNDLSNAEK VLDEDHYGLEKVKERILEYLAVQQRVDKVKAPILCLVGPPGVGKTSLGQSIARATNRKFVRMALGGVRDEAEIRGHRRTY IGSMPGKILQSLSKVGVRNPLFLLDEVDKMGMDFRGDPSSALLEVLDPEQNHTFADHYVEVDFDLSDVMFVATSNSLNIP PPLLDRMEVIRLSGYTEDEKVSIAQRYLLPKQKKNNGLKEGEIEVAEQAIRDIIRYYTREAGVRSLEREVSKICRKVVKM LLLKKASGAIKVDGENLDTFLGVRKYDFGLAAKENQVGQVTGLAWTEVGGDLLTIEAAVMPGKGNVIRTGSLGDVMKESV EAARSVVRSRSRRLGIKDEAFEKQDIHIHVPEGATPKDGPSAGIAMTTALVSVLTGIPVRADVAMTGEITLRGEVLPIGG LKEKLLAAHRGGIKLVLIPEENVKDLADIPDNVKNAIEIVPVRWIDKVLELALERLPNALPEEEAKAAAPVAEPAKDAGS TEVVKH >Mature_805_residues SGTQLLPSERTTLPLLPLRDVVVFPHMVIPLFVGRPKSIKALEVAMEGGKHIMLVAQKTAAKDEPTEKDMYDVGCIANIL QMLKLPDGTVKVLVEGLQRAQALSIEEQETQFSCEVMPLEPDHADSAETEALRRAIVSQFDQYVKLNKKIPPEILTSLSG IDEAGRLADTIAAHLPLKLDQKQHILEMFPVIERLEHLLAQLEAEIDILQVEKRIRGRVKRQMEKSQREYYLNEQVKAIQ KELGEGEEGADLEELEKRINAARMPKEAKKKADAELKKLKLMSPMSAEATVVRNYIDTLIALPWRKKSKVNNDLSNAEKV LDEDHYGLEKVKERILEYLAVQQRVDKVKAPILCLVGPPGVGKTSLGQSIARATNRKFVRMALGGVRDEAEIRGHRRTYI GSMPGKILQSLSKVGVRNPLFLLDEVDKMGMDFRGDPSSALLEVLDPEQNHTFADHYVEVDFDLSDVMFVATSNSLNIPP PLLDRMEVIRLSGYTEDEKVSIAQRYLLPKQKKNNGLKEGEIEVAEQAIRDIIRYYTREAGVRSLEREVSKICRKVVKML LLKKASGAIKVDGENLDTFLGVRKYDFGLAAKENQVGQVTGLAWTEVGGDLLTIEAAVMPGKGNVIRTGSLGDVMKESVE AARSVVRSRSRRLGIKDEAFEKQDIHIHVPEGATPKDGPSAGIAMTTALVSVLTGIPVRADVAMTGEITLRGEVLPIGGL KEKLLAAHRGGIKLVLIPEENVKDLADIPDNVKNAIEIVPVRWIDKVLELALERLPNALPEEEAKAAAPVAEPAKDAGST EVVKH
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
Organism=Homo sapiens, GI31377667, Length=568, Percent_Identity=46.6549295774648, Blast_Score=521, Evalue=1e-148, Organism=Homo sapiens, GI21396489, Length=683, Percent_Identity=40.8491947291362, Blast_Score=508, Evalue=1e-144, Organism=Escherichia coli, GI1786643, Length=773, Percent_Identity=69.987063389392, Blast_Score=1088, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=692, Percent_Identity=39.8843930635838, Blast_Score=481, Evalue=1e-136, Organism=Caenorhabditis elegans, GI17556486, Length=540, Percent_Identity=41.2962962962963, Blast_Score=436, Evalue=1e-122, Organism=Saccharomyces cerevisiae, GI6319449, Length=720, Percent_Identity=40.5555555555556, Blast_Score=516, Evalue=1e-147, Organism=Drosophila melanogaster, GI24666867, Length=689, Percent_Identity=41.6545718432511, Blast_Score=513, Evalue=1e-145, Organism=Drosophila melanogaster, GI221513036, Length=689, Percent_Identity=41.6545718432511, Blast_Score=513, Evalue=1e-145,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 89179; Mature: 89047
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS01046 LON_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGTQLLPSERTTLPLLPLRDVVVFPHMVIPLFVGRPKSIKALEVAMEGGKHIMLVAQKT CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEECC AAKDEPTEKDMYDVGCIANILQMLKLPDGTVKVLVEGLQRAQALSIEEQETQFSCEVMPL CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHCCCEEEEEEEC EPDHADSAETEALRRAIVSQFDQYVKLNKKIPPEILTSLSGIDEAGRLADTIAAHLPLKL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCC DQKQHILEMFPVIERLEHLLAQLEAEIDILQVEKRIRGRVKRQMEKSQREYYLNEQVKAI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKELGEGEEGADLEELEKRINAARMPKEAKKKADAELKKLKLMSPMSAEATVVRNYIDTL HHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH IALPWRKKSKVNNDLSNAEKVLDEDHYGLEKVKERILEYLAVQQRVDKVKAPILCLVGPP HHCCCCHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC GVGKTSLGQSIARATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGKILQSLSKVGVRNP CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHCCCCHHHHHHHHHHCCCCCC LFLLDEVDKMGMDFRGDPSSALLEVLDPEQNHTFADHYVEVDFDLSDVMFVATSNSLNIP HHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEECCEEEEEECCCCEEEEEECCCCCCC PPLLDRMEVIRLSGYTEDEKVSIAQRYLLPKQKKNNGLKEGEIEVAEQAIRDIIRYYTRE CHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHH AGVRSLEREVSKICRKVVKMLLLKKASGAIKVDGENLDTFLGVRKYDFGLAAKENQVGQV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHCCHHHCCCCCCCCCCCCCE TGLAWTEVGGDLLTIEAAVMPGKGNVIRTGSLGDVMKESVEAARSVVRSRSRRLGIKDEA ECEEHHHCCCCEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHC FEKQDIHIHVPEGATPKDGPSAGIAMTTALVSVLTGIPVRADVAMTGEITLRGEVLPIGG CCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECEEEECEEEEECEEEECCC LKEKLLAAHRGGIKLVLIPEENVKDLADIPDNVKNAIEIVPVRWIDKVLELALERLPNAL HHHHHHHHHCCCEEEEEECCCCHHHHHCCCHHHHHHHEEECHHHHHHHHHHHHHHCCCCC PEEEAKAAAPVAEPAKDAGSTEVVKH CCHHHHHCCCCCCCHHCCCCCHHCCC >Mature Secondary Structure SGTQLLPSERTTLPLLPLRDVVVFPHMVIPLFVGRPKSIKALEVAMEGGKHIMLVAQKT CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEECC AAKDEPTEKDMYDVGCIANILQMLKLPDGTVKVLVEGLQRAQALSIEEQETQFSCEVMPL CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHCCCEEEEEEEC EPDHADSAETEALRRAIVSQFDQYVKLNKKIPPEILTSLSGIDEAGRLADTIAAHLPLKL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCC DQKQHILEMFPVIERLEHLLAQLEAEIDILQVEKRIRGRVKRQMEKSQREYYLNEQVKAI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKELGEGEEGADLEELEKRINAARMPKEAKKKADAELKKLKLMSPMSAEATVVRNYIDTL HHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH IALPWRKKSKVNNDLSNAEKVLDEDHYGLEKVKERILEYLAVQQRVDKVKAPILCLVGPP HHCCCCHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC GVGKTSLGQSIARATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGKILQSLSKVGVRNP CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHCCCCHHHHHHHHHHCCCCCC LFLLDEVDKMGMDFRGDPSSALLEVLDPEQNHTFADHYVEVDFDLSDVMFVATSNSLNIP HHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEECCEEEEEECCCCEEEEEECCCCCCC PPLLDRMEVIRLSGYTEDEKVSIAQRYLLPKQKKNNGLKEGEIEVAEQAIRDIIRYYTRE CHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHH AGVRSLEREVSKICRKVVKMLLLKKASGAIKVDGENLDTFLGVRKYDFGLAAKENQVGQV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHCCHHHCCCCCCCCCCCCCE TGLAWTEVGGDLLTIEAAVMPGKGNVIRTGSLGDVMKESVEAARSVVRSRSRRLGIKDEA ECEEHHHCCCCEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHC FEKQDIHIHVPEGATPKDGPSAGIAMTTALVSVLTGIPVRADVAMTGEITLRGEVLPIGG CCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECEEEECEEEEECEEEECCC LKEKLLAAHRGGIKLVLIPEENVKDLADIPDNVKNAIEIVPVRWIDKVLELALERLPNAL HHHHHHHHHCCCEEEEEECCCCHHHHHCCCHHHHHHHEEECHHHHHHHHHHHHHHCCCCC PEEEAKAAAPVAEPAKDAGSTEVVKH CCHHHHHCCCCCCCHHCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8981986; 12620739 [H]