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The map label for this gene is oxaA [H]

Identifier: 83719666

GI number: 83719666

Start: 3687252

End: 3688925

Strand: Reverse

Name: oxaA [H]

Synonym: BTH_I3235

Alternate gene names: 83719666

Gene position: 3688925-3687252 (Counterclockwise)

Preceding gene: 83721157

Following gene: 161723129

Centisome position: 96.84

GC content: 64.58

Gene sequence:

>1674_bases
ATGGATATCAAACGCACCGTCCTATGGGTGATCTTCTTCATGTCAGCGGTCATGCTGTTCGACAACTGGCAGCGGTCCCA
CGGACGCCCGTCGATGTTCTTCCCGAACGTCACGCAGACGAACACCGCGTCGAACGCGACTAACGGCAATGGCGCGTCGG
GCGCGAGCGCGGCGGCGGCGAACGCGCTGCCGGCGGCCGCGACGGGCGCCGCTCCCGCGACGACAGCTCCCGCGGCGCAG
GCGCAGCTCGTGCGCTTCTCGACCGACGTCTATAACGGCGAGATCGACACGCGCGGCGGCACGCTCGCGAAGCTGACGCT
GACGAAGGCGGGCGACGGCAAGCAGCCCGACCTGTCGGTGACGCTCTTCGACAACGCGGCGAACCACACGTACCTCGCGC
GCACGGGCCTCCTCGGCGGTGACTTCCCGAACCACAACGATGTCTACACGCAGGCGGCCGGCCCGACGTCGCTCGCGGCC
GGCCAGAACACGCTGAAGCTCGCGTTCGAATCGCCCGTGAAGGGCGGCGTGAAGGTCGTGAAGACGTACACGTTCACGCG
CGGCAGCTACGTGATCGGCGTCGACACGAAGATCGAGAACGTCGGCACCGCGCCCGTGACGCCGAGCGTCTACATGGAGC
TCGTGCGCGACAACACGTCGGTCGAGACGCCGATGTTCTCGCACACGTTCCTCGGGCCGGCGGTGTACACGGATCAGAAG
CACTTCCAGAAGATCACGTTTAGCGACATCGACAAGAACAAGGCCGATTACGTCACGTCCGCCGACAACGGCTGGATCGC
GATGGTTCAGCACTACTTCGCGTCCGCGTGGATTCCGCAGCAAGGCGCGAAGCGCGACATCTATGTCGAGAAGATCGATC
CGACGCTGTACCGCGTCGGCGTGAAGCAGCCGGTTGCGGCGATCGCGCCGGGCCAGTCGGCCGACGTGTCCGCGCGCCTG
TTCGCCGGCCCGGAAGAAGAGCGGATGCTGGAAGGCATCGCGCCGGGGCTCGAGCTCGTGAAGGACTACGGCTGGGTGAC
GATCATCGCGAAGCCGCTGTTCTGGCTGCTCGAGAAGATCCACGGCTTCGTCGGCAACTGGGGCTGGGCGATCGTGCTGC
TCACGCTGCTGATCAAGGCGGTGTTCTTCCCGCTGTCGGCGGCGAGCTACAAGTCGATGGCGCGGATGAAGGAAATCACG
CCGCGGATGCAGGCGCTGCGCGAGCGCTTCAAGAGCGACCCGCAGAAGATGAATGCGGCGCTGATGGAGCTGTACAAGAC
CGAGAAGGTGAACCCGTTCGGCGGCTGCCTGCCGGTCGTGATTCAGATCCCGGTGTTCATCTCGCTGTACTGGGTGTTGC
TCGCGTCGGTGGAAATGCGCGGCGCGCCGTGGATTCTGTGGATTCACGACCTCTCGCAGCGCGACCCGTACTTCATCCTG
CCGGTGCTGATGGCCGTGTCGATGTTCGTGCAGACGAAGCTGAACCCGACCCCGCCGGACCCGGTCCAGGCGAAGATGAT
GATGTTCATGCCGATTGCTTTCTCGGTGATGTTCTTCTTCTTCCCGGCCGGCCTCGTGCTGTATTACGTGGTGAACAACG
TGCTGTCGATCGCGCAGCAGTACTACATCACGCGCACGCTCGGCGCCGCCGCGGCGAAGAAAAAGGCGAGCTGA

Upstream 100 bases:

>100_bases
TTTCCGCGGGCGGCATCGATCTCGTCCCGCCGCCCAACTCCGACGCACGTAACGCTCCTCACGAAGCTGAGGCGTCGTCC
CATCGACTCTGAGACAACGC

Downstream 100 bases:

>100_bases
CGCTCGGCCGGACGAAAAGGGGGCGATTCAGTTCGCCCTTTTTTTGCCGCTTCGGATGGTCGGGCTTCGTTTCGGCTGAA
GATAAGAAAAAGCCGCCTGG

Product: inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 557; Mature: 557

Protein sequence:

>557_residues
MDIKRTVLWVIFFMSAVMLFDNWQRSHGRPSMFFPNVTQTNTASNATNGNGASGASAAAANALPAAATGAAPATTAPAAQ
AQLVRFSTDVYNGEIDTRGGTLAKLTLTKAGDGKQPDLSVTLFDNAANHTYLARTGLLGGDFPNHNDVYTQAAGPTSLAA
GQNTLKLAFESPVKGGVKVVKTYTFTRGSYVIGVDTKIENVGTAPVTPSVYMELVRDNTSVETPMFSHTFLGPAVYTDQK
HFQKITFSDIDKNKADYVTSADNGWIAMVQHYFASAWIPQQGAKRDIYVEKIDPTLYRVGVKQPVAAIAPGQSADVSARL
FAGPEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEIT
PRMQALRERFKSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPYFIL
PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLGAAAAKKKAS

Sequences:

>Translated_557_residues
MDIKRTVLWVIFFMSAVMLFDNWQRSHGRPSMFFPNVTQTNTASNATNGNGASGASAAAANALPAAATGAAPATTAPAAQ
AQLVRFSTDVYNGEIDTRGGTLAKLTLTKAGDGKQPDLSVTLFDNAANHTYLARTGLLGGDFPNHNDVYTQAAGPTSLAA
GQNTLKLAFESPVKGGVKVVKTYTFTRGSYVIGVDTKIENVGTAPVTPSVYMELVRDNTSVETPMFSHTFLGPAVYTDQK
HFQKITFSDIDKNKADYVTSADNGWIAMVQHYFASAWIPQQGAKRDIYVEKIDPTLYRVGVKQPVAAIAPGQSADVSARL
FAGPEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEIT
PRMQALRERFKSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPYFIL
PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLGAAAAKKKAS
>Mature_557_residues
MDIKRTVLWVIFFMSAVMLFDNWQRSHGRPSMFFPNVTQTNTASNATNGNGASGASAAAANALPAAATGAAPATTAPAAQ
AQLVRFSTDVYNGEIDTRGGTLAKLTLTKAGDGKQPDLSVTLFDNAANHTYLARTGLLGGDFPNHNDVYTQAAGPTSLAA
GQNTLKLAFESPVKGGVKVVKTYTFTRGSYVIGVDTKIENVGTAPVTPSVYMELVRDNTSVETPMFSHTFLGPAVYTDQK
HFQKITFSDIDKNKADYVTSADNGWIAMVQHYFASAWIPQQGAKRDIYVEKIDPTLYRVGVKQPVAAIAPGQSADVSARL
FAGPEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEIT
PRMQALRERFKSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPYFIL
PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLGAAAAKKKAS

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=508, Percent_Identity=38.9763779527559, Blast_Score=380, Evalue=1e-106,
Organism=Drosophila melanogaster, GI24662345, Length=191, Percent_Identity=25.6544502617801, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21356443, Length=191, Percent_Identity=25.6544502617801, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 61080; Mature: 61080

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKRTVLWVIFFMSAVMLFDNWQRSHGRPSMFFPNVTQTNTASNATNGNGASGASAAAA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
NALPAAATGAAPATTAPAAQAQLVRFSTDVYNGEIDTRGGTLAKLTLTKAGDGKQPDLSV
CCCCCCCCCCCCCCCCCHHHHHHHEEEHHHCCCEEECCCCEEEEEEEEECCCCCCCCEEE
TLFDNAANHTYLARTGLLGGDFPNHNDVYTQAAGPTSLAAGQNTLKLAFESPVKGGVKVV
EEECCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCHHHCCCCEEEEEECCCCCCCEEEE
KTYTFTRGSYVIGVDTKIENVGTAPVTPSVYMELVRDNTSVETPMFSHTFLGPAVYTDQK
EEEEEECCCEEEEECCEECCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCCEECCHH
HFQKITFSDIDKNKADYVTSADNGWIAMVQHYFASAWIPQQGAKRDIYVEKIDPTLYRVG
HHHCCCHHHCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHEECC
VKQPVAAIAPGQSADVSARLFAGPEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKI
CCCCHHHCCCCCCCCCCEEEECCCCHHHHHHHHCHHHHHHHHCCEEEEHHHHHHHHHHHH
HGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAA
HHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPYFIL
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHH
PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQ
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YYITRTLGAAAAKKKAS
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDIKRTVLWVIFFMSAVMLFDNWQRSHGRPSMFFPNVTQTNTASNATNGNGASGASAAAA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
NALPAAATGAAPATTAPAAQAQLVRFSTDVYNGEIDTRGGTLAKLTLTKAGDGKQPDLSV
CCCCCCCCCCCCCCCCCHHHHHHHEEEHHHCCCEEECCCCEEEEEEEEECCCCCCCCEEE
TLFDNAANHTYLARTGLLGGDFPNHNDVYTQAAGPTSLAAGQNTLKLAFESPVKGGVKVV
EEECCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCHHHCCCCEEEEEECCCCCCCEEEE
KTYTFTRGSYVIGVDTKIENVGTAPVTPSVYMELVRDNTSVETPMFSHTFLGPAVYTDQK
EEEEEECCCEEEEECCEECCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCCEECCHH
HFQKITFSDIDKNKADYVTSADNGWIAMVQHYFASAWIPQQGAKRDIYVEKIDPTLYRVG
HHHCCCHHHCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHEECC
VKQPVAAIAPGQSADVSARLFAGPEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKI
CCCCHHHCCCCCCCCCCEEEECCCCHHHHHHHHCHHHHHHHHCCEEEEHHHHHHHHHHHH
HGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAA
HHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPYFIL
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHH
PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQ
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YYITRTLGAAAAKKKAS
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA