| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83719642
Identifier: 83719642
GI number: 83719642
Start: 1686460
End: 1687794
Strand: Reverse
Name: 83719642
Synonym: BTH_I1488
Alternate gene names: NA
Gene position: 1687794-1686460 (Counterclockwise)
Preceding gene: 83718919
Following gene: 83718924
Centisome position: 44.31
GC content: 69.96
Gene sequence:
>1335_bases ATGCTTCATCGCAGCAAAACCGCTCCCGCGGTCGGCCGGCCCGGTCATCTCGCGCACGTTGCCGCGCCGCGCGCCATGCT GAAATCCAGGCTTTCGAACCCCGACGTCGCGAAGGCCGTCGCGAACCTCGCGTGGCTCGGGCTCGAGCGGCTCACGCAGA TCGGCGTCGCGATCGTCGTGAGCGGCCTGCTCGCCCGCTACTTCGGCCCCGACGCATTCGGCAAATGGCAATACGCGAAC ACGCTCCTGCTCGTCCTCGCGCCGCTCACGTGGGTGTGCGGCGCGGAGATCCTCGTGCCGACGATCGTCCAGCGCACGGG CGCGCGACTGGGCGCCGTGCTCGGCAGCGCGTTCGCGCTGCGCTTCACCGTATCGGTCGCGGCGCTCGCGCTCACGTGGG CGGCGATCGCCCTGGGTGCGTTCGATCCGCTCGTCGGCGCGATGCTCGCCGGGCTCGCCGTGACGCTCGCGCTGCGCGAG CCGTTCGTCGGCATCGTCAACGCGTGGCTGCAAAGCATGACGTACAGCAAGCCGCAACTGCTCGCGAGCATCGCGGCCGC GCTCGCGAAGATGGCGCTCGTGTGGCTCTTCGTGCGCGCGGCCGCCGCGCCCGCGCGCTTCGGCTGGCTTTGGGCGCTCG AAGCCGCGGCGATCGCGGCCGCGCTGATGTGGTATTACCGCGACCGCAACGGCGGCGCGCTCGGCTGGCGCGTCGAGCGG CCGCTCGTGCGCGAGTTCGCGACGACGGGCACCGTGTTCTGGCTCGGCCTCGTGTGCATGTATCTGTTCCTGAAGCTCGA CCGGCTGATGCTCGAGCGCTACGTGTCGTTCGCCGAGCTCGGCCGCTACGCGGCCGCGCAGCAACTGAACGAGAACTGGA TCACGCTCGCGCTGATGCTCGCGCAGACGATCGCGCCCGCGTTCGTCTATCGCGTGCAGGACGCGCGGCAACTGCGCCGC AACGTCTGGCGTCTGATCGGCATGACGGCCGCGCTGATGGTCGCGGGCGCGCTCGTGCTCGACCTGCTCGCGGGCCTCAT CATCCGCAACGTGTTCGGGCCCGGCTTCGACACGTCGGTCGACGTGTTCCGCTGGGCGGTGTGGCTGTCGGTGCCGGCCG GCATCGAGGCGATCGGCAATCTCGTCGTGCTCAAGTACCAGGCGAAGTTCGTGCTGCTCGCGAAGTGGTCGATGGCGCTC GCGCTCGCCGCGCTCGTCAACCTGATCGCGATCCCCGCGCTCGGCCTCTATGGCGCGCTCGCGGGCCTCGCCGCCGGCTA CCTCGCCGCCGCGTCGGTCAATTTCTACTATATTCGCGTGAAGCTGCGCCCATGA
Upstream 100 bases:
>100_bases CGAGGGGCAACGCAGGGCCCTGCGGATGCCGGAAGCGAATCCGATCCAACTTATAATCGCTGGTTTCAGCTACGCCGATC GCGCCCATTTTAATGCCTGA
Downstream 100 bases:
>100_bases CGCCCTCTTTCGCCCCGCCCGGCGCCGCCCGTTCGCTCGACGACGTCGCCGTGCTGATCCCCGCGTACAACGCGCACGAC GATCTGCTGCGCACGCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: O-Antigen Export Protein; Oligosaccharide Translocase; Lipopolysaccharide Biosynthesis Protein; PST Family Polysaccharide Export Protein
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MLHRSKTAPAVGRPGHLAHVAAPRAMLKSRLSNPDVAKAVANLAWLGLERLTQIGVAIVVSGLLARYFGPDAFGKWQYAN TLLLVLAPLTWVCGAEILVPTIVQRTGARLGAVLGSAFALRFTVSVAALALTWAAIALGAFDPLVGAMLAGLAVTLALRE PFVGIVNAWLQSMTYSKPQLLASIAAALAKMALVWLFVRAAAAPARFGWLWALEAAAIAAALMWYYRDRNGGALGWRVER PLVREFATTGTVFWLGLVCMYLFLKLDRLMLERYVSFAELGRYAAAQQLNENWITLALMLAQTIAPAFVYRVQDARQLRR NVWRLIGMTAALMVAGALVLDLLAGLIIRNVFGPGFDTSVDVFRWAVWLSVPAGIEAIGNLVVLKYQAKFVLLAKWSMAL ALAALVNLIAIPALGLYGALAGLAAGYLAAASVNFYYIRVKLRP
Sequences:
>Translated_444_residues MLHRSKTAPAVGRPGHLAHVAAPRAMLKSRLSNPDVAKAVANLAWLGLERLTQIGVAIVVSGLLARYFGPDAFGKWQYAN TLLLVLAPLTWVCGAEILVPTIVQRTGARLGAVLGSAFALRFTVSVAALALTWAAIALGAFDPLVGAMLAGLAVTLALRE PFVGIVNAWLQSMTYSKPQLLASIAAALAKMALVWLFVRAAAAPARFGWLWALEAAAIAAALMWYYRDRNGGALGWRVER PLVREFATTGTVFWLGLVCMYLFLKLDRLMLERYVSFAELGRYAAAQQLNENWITLALMLAQTIAPAFVYRVQDARQLRR NVWRLIGMTAALMVAGALVLDLLAGLIIRNVFGPGFDTSVDVFRWAVWLSVPAGIEAIGNLVVLKYQAKFVLLAKWSMAL ALAALVNLIAIPALGLYGALAGLAAGYLAAASVNFYYIRVKLRP >Mature_444_residues MLHRSKTAPAVGRPGHLAHVAAPRAMLKSRLSNPDVAKAVANLAWLGLERLTQIGVAIVVSGLLARYFGPDAFGKWQYAN TLLLVLAPLTWVCGAEILVPTIVQRTGARLGAVLGSAFALRFTVSVAALALTWAAIALGAFDPLVGAMLAGLAVTLALRE PFVGIVNAWLQSMTYSKPQLLASIAAALAKMALVWLFVRAAAAPARFGWLWALEAAAIAAALMWYYRDRNGGALGWRVER PLVREFATTGTVFWLGLVCMYLFLKLDRLMLERYVSFAELGRYAAAQQLNENWITLALMLAQTIAPAFVYRVQDARQLRR NVWRLIGMTAALMVAGALVLDLLAGLIIRNVFGPGFDTSVDVFRWAVWLSVPAGIEAIGNLVVLKYQAKFVLLAKWSMAL ALAALVNLIAIPALGLYGALAGLAAGYLAAASVNFYYIRVKLRP
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47973; Mature: 47973
Theoretical pI: Translated: 10.82; Mature: 10.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHRSKTAPAVGRPGHLAHVAAPRAMLKSRLSNPDVAKAVANLAWLGLERLTQIGVAIVV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SGLLARYFGPDAFGKWQYANTLLLVLAPLTWVCGAEILVPTIVQRTGARLGAVLGSAFAL HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH RFTVSVAALALTWAAIALGAFDPLVGAMLAGLAVTLALREPFVGIVNAWLQSMTYSKPQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LASIAAALAKMALVWLFVRAAAAPARFGWLWALEAAAIAAALMWYYRDRNGGALGWRVER HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECEEECH PLVREFATTGTVFWLGLVCMYLFLKLDRLMLERYVSFAELGRYAAAQQLNENWITLALML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH AQTIAPAFVYRVQDARQLRRNVWRLIGMTAALMVAGALVLDLLAGLIIRNVFGPGFDTSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH DVFRWAVWLSVPAGIEAIGNLVVLKYQAKFVLLAKWSMALALAALVNLIAIPALGLYGAL HHHHHHHHHHCCCCHHHHCCEEEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLAAGYLAAASVNFYYIRVKLRP HHHHHHHHHHHEEEEEEEEEEECC >Mature Secondary Structure MLHRSKTAPAVGRPGHLAHVAAPRAMLKSRLSNPDVAKAVANLAWLGLERLTQIGVAIVV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SGLLARYFGPDAFGKWQYANTLLLVLAPLTWVCGAEILVPTIVQRTGARLGAVLGSAFAL HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH RFTVSVAALALTWAAIALGAFDPLVGAMLAGLAVTLALREPFVGIVNAWLQSMTYSKPQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LASIAAALAKMALVWLFVRAAAAPARFGWLWALEAAAIAAALMWYYRDRNGGALGWRVER HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECEEECH PLVREFATTGTVFWLGLVCMYLFLKLDRLMLERYVSFAELGRYAAAQQLNENWITLALML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH AQTIAPAFVYRVQDARQLRRNVWRLIGMTAALMVAGALVLDLLAGLIIRNVFGPGFDTSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH DVFRWAVWLSVPAGIEAIGNLVVLKYQAKFVLLAKWSMALALAALVNLIAIPALGLYGAL HHHHHHHHHHCCCCHHHHCCEEEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLAAGYLAAASVNFYYIRVKLRP HHHHHHHHHHHEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA