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The map label for this gene is tsf [H]

Identifier: 83719639

GI number: 83719639

Start: 2299633

End: 2300514

Strand: Direct

Name: tsf [H]

Synonym: BTH_I2028

Alternate gene names: 83719639

Gene position: 2299633-2300514 (Clockwise)

Preceding gene: 161723148

Following gene: 161723168

Centisome position: 60.37

GC content: 64.17

Gene sequence:

>882_bases
ATGGCGGCAATTACCGCAAGCATGGTGGCAGAACTGCGCGCGAAGACCGACGCACCGATGATGGAGTGCAAGAAGGCGCT
GACGGAAGCCGACGGCGACATGGCCAAGGCCGAAGAACTGCTGCGCGTGAAGCTCGGCAACAAGGCGAGCAAGGCCGCGT
CGCGCGTGACGGCCGAAGGCGTCGTCGCATCGTTCGTCGGCGCCAATGCCGGCGCGCTCGTCGAGCTGAACTGCGAAACC
GACTTCGTCGCGAAGAACGACGATTTCAACGCGTTCGCGAAGACGGTCGCTGAACTCGTCGCGACGCAGAACCCGGCCGA
CGTCGCTGCGCTGTCCGCGTTGCCGCTCGACGGCAAGACCGTCGACGAAGTGCGCCTCGCGCTCGTCGGCAAGATCGGCG
AGAACATCTCGATCCGCCGTTTCGTTCGTTTCGAAACGTCGAACAAGCTCGCGACTTACCTGCACGGCAGCCGCATCGGC
GTGATCGTCGAGTACACGGGCGAGCAGGAGCAGGTCGGCAAGGACGTCGCGATGCACGTCGCGGCAATGAAGCCCGTCTC
GCTGTCGTCGGACGACGTGCCGGCCGAACTGATCGAGAAGGAGCGCCGCGTCGCCGAGCAGAAGGCTGCCGAATCGGGCA
AGCCGGCCGAGATCGTCGCGAAGATGGTCGACGGCAGCGTCCAGAAGTTCCTGAAGGAAGTGTCGCTGCTGAACCAGCCG
TTCGTGAAGAACGACAAGCAGACGATCGAGCAGATGCTGAAGGCCTCGAATGCGGCGGTGCAAAAGTTTGCCCTCTTCGT
GGTCGGCGAAGGCATCGAGAAGCGCCAGGACGACTTCGCGGCGGAAGTGGCCGCGCAGGTCGCCGCCGCGAAGCAGCAGT
AA

Upstream 100 bases:

>100_bases
CTGACGCGGCGCAAGGATTGCGCAAACGTCCGGAAACGAATGCCTGTCGCCTGCGTCGAAGTGCGGGCGGCGTTGTGAAT
ACAGACTCAAGGAGCGAATG

Downstream 100 bases:

>100_bases
CCAGTCGTAAAAGCGGTAACCAGCAGTACGCTTGACCCGCGGCGGACGACCGTTCCGCCGCGGCCGGCAGCGCCGCCTGA
CGGGTCTTTCAGCCAGCCCG

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts [H]

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MAAITASMVAELRAKTDAPMMECKKALTEADGDMAKAEELLRVKLGNKASKAASRVTAEGVVASFVGANAGALVELNCET
DFVAKNDDFNAFAKTVAELVATQNPADVAALSALPLDGKTVDEVRLALVGKIGENISIRRFVRFETSNKLATYLHGSRIG
VIVEYTGEQEQVGKDVAMHVAAMKPVSLSSDDVPAELIEKERRVAEQKAAESGKPAEIVAKMVDGSVQKFLKEVSLLNQP
FVKNDKQTIEQMLKASNAAVQKFALFVVGEGIEKRQDDFAAEVAAQVAAAKQQ

Sequences:

>Translated_293_residues
MAAITASMVAELRAKTDAPMMECKKALTEADGDMAKAEELLRVKLGNKASKAASRVTAEGVVASFVGANAGALVELNCET
DFVAKNDDFNAFAKTVAELVATQNPADVAALSALPLDGKTVDEVRLALVGKIGENISIRRFVRFETSNKLATYLHGSRIG
VIVEYTGEQEQVGKDVAMHVAAMKPVSLSSDDVPAELIEKERRVAEQKAAESGKPAEIVAKMVDGSVQKFLKEVSLLNQP
FVKNDKQTIEQMLKASNAAVQKFALFVVGEGIEKRQDDFAAEVAAQVAAAKQQ
>Mature_292_residues
AAITASMVAELRAKTDAPMMECKKALTEADGDMAKAEELLRVKLGNKASKAASRVTAEGVVASFVGANAGALVELNCETD
FVAKNDDFNAFAKTVAELVATQNPADVAALSALPLDGKTVDEVRLALVGKIGENISIRRFVRFETSNKLATYLHGSRIGV
IVEYTGEQEQVGKDVAMHVAAMKPVSLSSDDVPAELIEKERRVAEQKAAESGKPAEIVAKMVDGSVQKFLKEVSLLNQPF
VKNDKQTIEQMLKASNAAVQKFALFVVGEGIEKRQDDFAAEVAAQVAAAKQQ

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome [H]

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family [H]

Homologues:

Organism=Homo sapiens, GI171846268, Length=236, Percent_Identity=31.7796610169492, Blast_Score=96, Evalue=4e-20,
Organism=Escherichia coli, GI1786366, Length=285, Percent_Identity=50.1754385964912, Blast_Score=248, Evalue=5e-67,
Organism=Caenorhabditis elegans, GI17561440, Length=295, Percent_Identity=27.4576271186441, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI19921466, Length=294, Percent_Identity=30.952380952381, Blast_Score=108, Evalue=3e-24,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449 [H]

Pfam domain/function: PF00889 EF_TS; PF00627 UBA [H]

EC number: NA

Molecular weight: Translated: 31282; Mature: 31151

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAITASMVAELRAKTDAPMMECKKALTEADGDMAKAEELLRVKLGNKASKAASRVTAEG
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
VVASFVGANAGALVELNCETDFVAKNDDFNAFAKTVAELVATQNPADVAALSALPLDGKT
HHHHHHCCCCCEEEEEECCCCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCH
VDEVRLALVGKIGENISIRRFVRFETSNKLATYLHGSRIGVIVEYTGEQEQVGKDVAMHV
HHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHEECCCEEEEEEEECCCHHHHHHHHHHHH
AAMKPVSLSSDDVPAELIEKERRVAEQKAAESGKPAEIVAKMVDGSVQKFLKEVSLLNQP
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
FVKNDKQTIEQMLKASNAAVQKFALFVVGEGIEKRQDDFAAEVAAQVAAAKQQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AAITASMVAELRAKTDAPMMECKKALTEADGDMAKAEELLRVKLGNKASKAASRVTAEG
CCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
VVASFVGANAGALVELNCETDFVAKNDDFNAFAKTVAELVATQNPADVAALSALPLDGKT
HHHHHHCCCCCEEEEEECCCCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCH
VDEVRLALVGKIGENISIRRFVRFETSNKLATYLHGSRIGVIVEYTGEQEQVGKDVAMHV
HHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHEECCCEEEEEEEECCCHHHHHHHHHHHH
AAMKPVSLSSDDVPAELIEKERRVAEQKAAESGKPAEIVAKMVDGSVQKFLKEVSLLNQP
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
FVKNDKQTIEQMLKASNAAVQKFALFVVGEGIEKRQDDFAAEVAAQVAAAKQQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA