| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is scbA [H]
Identifier: 83719628
GI number: 83719628
Start: 795006
End: 796007
Strand: Reverse
Name: scbA [H]
Synonym: BTH_I0690
Alternate gene names: 83719628
Gene position: 796007-795006 (Counterclockwise)
Preceding gene: 83718670
Following gene: 83720767
Centisome position: 20.9
GC content: 70.46
Gene sequence:
>1002_bases ATGCCGCCAACCGAATCGAGGATAGACCGCATGTCCCTTGCCGCCACGTTGCGCGCGCCGCTGCGCACGTTTGCCTCTTC GCCCCGCGCGCCGCGCCCGGCGCTCGAACTACACGCATCGCCGCTGCTGCGCGCGGCGCGCACGCTTGCCGCCGGCATCG CCGCGCTCGCGCTCACGAGCGCCGCGTTCGCGCAGAACGCGGCGCTCAAGATCGTCGCCGCCGAGAACTTCTACGGCGAC GTCGCGAAGCAGATCGGCGGCGCGCGCGTCGCCGTGTCGAGCGTGCTCAGCAATCCCGATCAGGACCCGCACCTGTTCGA GGCGAGCCCGAAGGTCGCGCGCGAGCTGCAGCACGCGGATCTCGTGATCTACAACGGCGCCGACTACGATCCGTGGATGG CGACGCTGCTGGCCGCGTCGAGGAATGCGAAGCGCGCGACCATCGTCGTCGCCGAGCTCGTCGGCAAGAAGGCGGGCGAC AACCCGCACCTGTGGTACGACCCGGCGACGATGCCCGCCGCGGCGCGCGCGCTCGCCGCGGCCCTCGGCTCCGCGGACCC CGCGCACAAGGCCGAGTACGACGCGAATCTCGCGAAGTTCGTCGCGTCGATGAAGCCGATCGACGCGAAGCTGGCCGAGC TGCGCGCGCGCTACAAGGGCGCGAGCGTGACCGCGACGGAGCCCGTGTTCGGCTACATGGCCGACGCGATCGGGCTCGAC ATGCGCAACCAGCGCTTCCAGCTCGCGGCGATGAACGACACCGAGGCGAGCCCGGCCGACATCGCCGCGTTCGAGAACGA TCTGAAGAAGCGCCAGGTGCGCGTGCTGATCTACAACAGCCAGGCGGTCGAGCCGATGACGAAGCGCATGCTCAAGCTCG CGCAGGACGCGCGCGTGCCGACCGTGAGCGTCACCGAGACGCAACCCGCCGGCAAGACCTTCCAGCAATGGATGCTCGCA CAGCTCGACGCGCTCGCGGCGGCGCTCGGGCAGCGCCCGTAA
Upstream 100 bases:
>100_bases GCAGTGCAAGACGAAGCACGCGCATCACGGCTGAATCCGTTCGCCGCTTTTTCCGGCCGCTCGGCTCGCTGCGCGGCCGG CCGCTGTTCCCGGCTTCTTC
Downstream 100 bases:
>100_bases CGAACGTTTCACGACAGCAACGACATGACCCACCCCATGCATGCGCTCGAACTCGATCACGTGACGCTCGCGCTCGGCGG CCGCACGATCCTGCGCGACG
Product: ABC transporter solute-binding protein
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MPPTESRIDRMSLAATLRAPLRTFASSPRAPRPALELHASPLLRAARTLAAGIAALALTSAAFAQNAALKIVAAENFYGD VAKQIGGARVAVSSVLSNPDQDPHLFEASPKVARELQHADLVIYNGADYDPWMATLLAASRNAKRATIVVAELVGKKAGD NPHLWYDPATMPAAARALAAALGSADPAHKAEYDANLAKFVASMKPIDAKLAELRARYKGASVTATEPVFGYMADAIGLD MRNQRFQLAAMNDTEASPADIAAFENDLKKRQVRVLIYNSQAVEPMTKRMLKLAQDARVPTVSVTETQPAGKTFQQWMLA QLDALAAALGQRP
Sequences:
>Translated_333_residues MPPTESRIDRMSLAATLRAPLRTFASSPRAPRPALELHASPLLRAARTLAAGIAALALTSAAFAQNAALKIVAAENFYGD VAKQIGGARVAVSSVLSNPDQDPHLFEASPKVARELQHADLVIYNGADYDPWMATLLAASRNAKRATIVVAELVGKKAGD NPHLWYDPATMPAAARALAAALGSADPAHKAEYDANLAKFVASMKPIDAKLAELRARYKGASVTATEPVFGYMADAIGLD MRNQRFQLAAMNDTEASPADIAAFENDLKKRQVRVLIYNSQAVEPMTKRMLKLAQDARVPTVSVTETQPAGKTFQQWMLA QLDALAAALGQRP >Mature_332_residues PPTESRIDRMSLAATLRAPLRTFASSPRAPRPALELHASPLLRAARTLAAGIAALALTSAAFAQNAALKIVAAENFYGDV AKQIGGARVAVSSVLSNPDQDPHLFEASPKVARELQHADLVIYNGADYDPWMATLLAASRNAKRATIVVAELVGKKAGDN PHLWYDPATMPAAARALAAALGSADPAHKAEYDANLAKFVASMKPIDAKLAELRARYKGASVTATEPVFGYMADAIGLDM RNQRFQLAAMNDTEASPADIAAFENDLKKRQVRVLIYNSQAVEPMTKRMLKLAQDARVPTVSVTETQPAGKTFQQWMLAQ LDALAAALGQRP
Specific function: Part of an ATP-driven transport system for manganese. Does not exhibit adhesion properties [H]
COG id: COG0803
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 9 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006127 - InterPro: IPR006129 - InterPro: IPR006128 [H]
Pfam domain/function: PF01297 SBP_bac_9 [H]
EC number: NA
Molecular weight: Translated: 35622; Mature: 35491
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPTESRIDRMSLAATLRAPLRTFASSPRAPRPALELHASPLLRAARTLAAGIAALALTS CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AAFAQNAALKIVAAENFYGDVAKQIGGARVAVSSVLSNPDQDPHLFEASPKVARELQHAD HHHHCCCEEEEEEECCHHHHHHHHHCCHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHCC LVIYNGADYDPWMATLLAASRNAKRATIVVAELVGKKAGDNPHLWYDPATMPAAARALAA EEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHH ALGSADPAHKAEYDANLAKFVASMKPIDAKLAELRARYKGASVTATEPVFGYMADAIGLD HHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHCCC MRNQRFQLAAMNDTEASPADIAAFENDLKKRQVRVLIYNSQAVEPMTKRMLKLAQDARVP CCCCEEEEEECCCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCC TVSVTETQPAGKTFQQWMLAQLDALAAALGQRP EEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PPTESRIDRMSLAATLRAPLRTFASSPRAPRPALELHASPLLRAARTLAAGIAALALTS CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AAFAQNAALKIVAAENFYGDVAKQIGGARVAVSSVLSNPDQDPHLFEASPKVARELQHAD HHHHCCCEEEEEEECCHHHHHHHHHCCHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHCC LVIYNGADYDPWMATLLAASRNAKRATIVVAELVGKKAGDNPHLWYDPATMPAAARALAA EEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHH ALGSADPAHKAEYDANLAKFVASMKPIDAKLAELRARYKGASVTATEPVFGYMADAIGLD HHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHCCC MRNQRFQLAAMNDTEASPADIAAFENDLKKRQVRVLIYNSQAVEPMTKRMLKLAQDARVP CCCCEEEEEECCCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCC TVSVTETQPAGKTFQQWMLAQLDALAAALGQRP EEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8675315 [H]