| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is pucI [H]
Identifier: 83719446
GI number: 83719446
Start: 2338228
End: 2339718
Strand: Direct
Name: pucI [H]
Synonym: BTH_I2065
Alternate gene names: 83719446
Gene position: 2338228-2339718 (Clockwise)
Preceding gene: 83720494
Following gene: 83721450
Centisome position: 61.38
GC content: 64.86
Gene sequence:
>1491_bases ATGGCTCAGTTCAGTGTGGCGCAGCAAAGCGCCTCGTATCGGCCGAACGAGGGGCGCCCGGGCGACCCGGACGGCGGCGC GGCGATGCCCGCCGGCTACAGCAAACGTCTGTACAACGAAGATCTCGCGCCGCTCGCGAACCAGAACTGGGGGGCATATA ACATCTTCGCGTTCTGGATGTCGGACGTGCACAGCGTCGGCGGCTACGTGTTCGCGGGCAGCCTGTTCGCGCTCGGCCTG ACGAGCTGGCAGGTGCTCGCCGCGCTGATCGTCGGCATTTCGATCGTCAACGTGCTGTGCAACCTGATCGCGAAGCCGAG CCAGCAGCTCGGCGTGCCGTATCCGGTGGCATGCCGCGCGACGTTCGGCGTGCTCGGGGCGAACGTGCCCGCGGTGATTC GCGGCCTCATCGCGATCGCATGGTACGGAATCCAAACTTACCTCGCGTCGAGCGCGCTCGTGATCGTCGTGCTCAAGTTC TTTCCGCAATGGATGCCGTACGCGGACGTGCATCGCTATGGCTTTCTCGGGCTGTCGGCGCTCGGCTGGGCGGGCTTCAT GCTGCTGTGGGTGCTGCAGGCGTTCGTGTTCTGGAACGGCATGGAGACGATCAAGAAGTTCATCGATTTCGCCGGTCCTG CGGTGTACGTGGTGATGTTCGTCCTCGCGGGCTACATGGTGTGGCGCGCGGGCTGGCGCAACATTGGCCTCGATCTCGGC GGCGTCAAGTATCACGGCGCCGAAGTGCTTCCGGTGATGGTGACGGCGATCTCGCTCGTCGTGTCGTATTTCTCCGGACC GATGCTCAACTTCGGCGACTTCTCGCGGTACTGCAGGAGCTACGGCAGCGTGAAGCGCGGCAATTTCTGGGGATTGCCCG TCAACTTTCTCGCGTTCTCGCTCGTCACCGTCATCACGACGGCCGCGACGCTGCCGGTGTTCGGACAACTGATCACGGAC CCCGTCGAGACGGTCGGCCGCATCGATCATCCGACCGCCGTGATTCTCGGCGCGCTGACCTTCACGATCGCGACGATCGG CATCAACATCGTCGCGAACTTCGTGTCGCCCGCATTCGACTTCTCGAACGTCGCGCCGCGCCTGATCAGCTGGCGTGCGG GCGGGATGCTCGCGGCGGTTGCCTCGGTGTTCATCACGCCGTGGAATCTCTTCAACAATCCCGCGGTGATCCATTACACG CTCGACGTGCTCGGCAGCTTCATCGGGCCGCTGTATGGCGTGCTGATCGTCGATTTCTACCTCGTGAAGCGCGGCGCGCT GCGGCGCGACGATCTGTATACGACGTCGGCCGACGGCGCGTACTGGTATCGCGACGGCGTGAACCGGCGCGCGGTCGCCG CGTTGTTGCCCGCGGCCGCGATCGCGGTTGCGTGCGTGATGGTGCCCGCGCCGTCCGGGCTCGCGAACTTCTCCTGGTTC ATCGGCGCGGCGCTCGGCGGTGCGTTCTACCGCGCGCTTGCGAAAGCATGA
Upstream 100 bases:
>100_bases CGCGTGCGGACGCCTCGCCAGGGCGGCATCGGGCGATCACGCTCGAGCCGCGATTTCAATGACGATCGCGCGGCTCGTCC GCGGCAGGCAAGGAGATGTC
Downstream 100 bases:
>100_bases TGGAGTCCGTATGAAAATAAAACTGATCAATCCGAACACGACGCAGCGGATGACCGACGCGATGGGCCGCTGCGCGCGCG AGGTCGCGGCGGCCGGCACG
Product: NCS1 nucleoside transporter family protein
Products: NA
Alternate protein names: Allantoin transport protein [H]
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MAQFSVAQQSASYRPNEGRPGDPDGGAAMPAGYSKRLYNEDLAPLANQNWGAYNIFAFWMSDVHSVGGYVFAGSLFALGL TSWQVLAALIVGISIVNVLCNLIAKPSQQLGVPYPVACRATFGVLGANVPAVIRGLIAIAWYGIQTYLASSALVIVVLKF FPQWMPYADVHRYGFLGLSALGWAGFMLLWVLQAFVFWNGMETIKKFIDFAGPAVYVVMFVLAGYMVWRAGWRNIGLDLG GVKYHGAEVLPVMVTAISLVVSYFSGPMLNFGDFSRYCRSYGSVKRGNFWGLPVNFLAFSLVTVITTAATLPVFGQLITD PVETVGRIDHPTAVILGALTFTIATIGINIVANFVSPAFDFSNVAPRLISWRAGGMLAAVASVFITPWNLFNNPAVIHYT LDVLGSFIGPLYGVLIVDFYLVKRGALRRDDLYTTSADGAYWYRDGVNRRAVAALLPAAAIAVACVMVPAPSGLANFSWF IGAALGGAFYRALAKA
Sequences:
>Translated_496_residues MAQFSVAQQSASYRPNEGRPGDPDGGAAMPAGYSKRLYNEDLAPLANQNWGAYNIFAFWMSDVHSVGGYVFAGSLFALGL TSWQVLAALIVGISIVNVLCNLIAKPSQQLGVPYPVACRATFGVLGANVPAVIRGLIAIAWYGIQTYLASSALVIVVLKF FPQWMPYADVHRYGFLGLSALGWAGFMLLWVLQAFVFWNGMETIKKFIDFAGPAVYVVMFVLAGYMVWRAGWRNIGLDLG GVKYHGAEVLPVMVTAISLVVSYFSGPMLNFGDFSRYCRSYGSVKRGNFWGLPVNFLAFSLVTVITTAATLPVFGQLITD PVETVGRIDHPTAVILGALTFTIATIGINIVANFVSPAFDFSNVAPRLISWRAGGMLAAVASVFITPWNLFNNPAVIHYT LDVLGSFIGPLYGVLIVDFYLVKRGALRRDDLYTTSADGAYWYRDGVNRRAVAALLPAAAIAVACVMVPAPSGLANFSWF IGAALGGAFYRALAKA >Mature_495_residues AQFSVAQQSASYRPNEGRPGDPDGGAAMPAGYSKRLYNEDLAPLANQNWGAYNIFAFWMSDVHSVGGYVFAGSLFALGLT SWQVLAALIVGISIVNVLCNLIAKPSQQLGVPYPVACRATFGVLGANVPAVIRGLIAIAWYGIQTYLASSALVIVVLKFF PQWMPYADVHRYGFLGLSALGWAGFMLLWVLQAFVFWNGMETIKKFIDFAGPAVYVVMFVLAGYMVWRAGWRNIGLDLGG VKYHGAEVLPVMVTAISLVVSYFSGPMLNFGDFSRYCRSYGSVKRGNFWGLPVNFLAFSLVTVITTAATLPVFGQLITDP VETVGRIDHPTAVILGALTFTIATIGINIVANFVSPAFDFSNVAPRLISWRAGGMLAAVASVFITPWNLFNNPAVIHYTL DVLGSFIGPLYGVLIVDFYLVKRGALRRDDLYTTSADGAYWYRDGVNRRAVAALLPAAAIAVACVMVPAPSGLANFSWFI GAALGGAFYRALAKA
Specific function: Transport of allantoin [H]
COG id: COG1953
COG function: function code FH; Cytosine/uracil/thiamine/allantoin permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
Organism=Escherichia coli, GI87081749, Length=471, Percent_Identity=28.4501061571125, Blast_Score=192, Evalue=5e-50, Organism=Saccharomyces cerevisiae, GI6319495, Length=438, Percent_Identity=25.1141552511416, Blast_Score=150, Evalue=6e-37, Organism=Saccharomyces cerevisiae, GI6322219, Length=438, Percent_Identity=23.0593607305936, Blast_Score=143, Evalue=7e-35, Organism=Saccharomyces cerevisiae, GI6319429, Length=514, Percent_Identity=22.9571984435798, Blast_Score=123, Evalue=8e-29, Organism=Saccharomyces cerevisiae, GI6323266, Length=472, Percent_Identity=22.0338983050847, Blast_Score=93, Evalue=8e-20, Organism=Saccharomyces cerevisiae, GI6324766, Length=472, Percent_Identity=21.8220338983051, Blast_Score=92, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6324645, Length=468, Percent_Identity=20.0854700854701, Blast_Score=81, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 - InterPro: IPR012681 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 53500; Mature: 53369
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQFSVAQQSASYRPNEGRPGDPDGGAAMPAGYSKRLYNEDLAPLANQNWGAYNIFAFWM CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHH SDVHSVGGYVFAGSLFALGLTSWQVLAALIVGISIVNVLCNLIAKPSQQLGVPYPVACRA HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHH TFGVLGANVPAVIRGLIAIAWYGIQTYLASSALVIVVLKFFPQWMPYADVHRYGFLGLSA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LGWAGFMLLWVLQAFVFWNGMETIKKFIDFAGPAVYVVMFVLAGYMVWRAGWRNIGLDLG HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHCCCCCC GVKYHGAEVLPVMVTAISLVVSYFSGPMLNFGDFSRYCRSYGSVKRGNFWGLPVNFLAFS CCEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHH LVTVITTAATLPVFGQLITDPVETVGRIDHPTAVILGALTFTIATIGINIVANFVSPAFD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FSNVAPRLISWRAGGMLAAVASVFITPWNLFNNPAVIHYTLDVLGSFIGPLYGVLIVDFY HHHHHHHHHHHCCCHHHHHHHHHHHCCHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH LVKRGALRRDDLYTTSADGAYWYRDGVNRRAVAALLPAAAIAVACVMVPAPSGLANFSWF HHHCCCCCCCCCEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH IGAALGGAFYRALAKA HHHHHHHHHHHHHHCC >Mature Secondary Structure AQFSVAQQSASYRPNEGRPGDPDGGAAMPAGYSKRLYNEDLAPLANQNWGAYNIFAFWM CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHH SDVHSVGGYVFAGSLFALGLTSWQVLAALIVGISIVNVLCNLIAKPSQQLGVPYPVACRA HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHH TFGVLGANVPAVIRGLIAIAWYGIQTYLASSALVIVVLKFFPQWMPYADVHRYGFLGLSA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LGWAGFMLLWVLQAFVFWNGMETIKKFIDFAGPAVYVVMFVLAGYMVWRAGWRNIGLDLG HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHCCCCCC GVKYHGAEVLPVMVTAISLVVSYFSGPMLNFGDFSRYCRSYGSVKRGNFWGLPVNFLAFS CCEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHH LVTVITTAATLPVFGQLITDPVETVGRIDHPTAVILGALTFTIATIGINIVANFVSPAFD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FSNVAPRLISWRAGGMLAAVASVFITPWNLFNNPAVIHYTLDVLGSFIGPLYGVLIVDFY HHHHHHHHHHHCCCHHHHHHHHHHHCCHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH LVKRGALRRDDLYTTSADGAYWYRDGVNRRAVAALLPAAAIAVACVMVPAPSGLANFSWF HHHCCCCCCCCCEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH IGAALGGAFYRALAKA HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377; 11344136 [H]