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The map label for this gene is skp [H]

Identifier: 83719406

GI number: 83719406

Start: 2308732

End: 2309265

Strand: Direct

Name: skp [H]

Synonym: BTH_I2036

Alternate gene names: 83719406

Gene position: 2308732-2309265 (Clockwise)

Preceding gene: 83719831

Following gene: 83718496

Centisome position: 60.61

GC content: 65.17

Gene sequence:

>534_bases
TTGCTAACCGGTAAGTTTTCGAAACGAGTGATGTGCGCGCTGGCGCTCGCTGCCGCGCTCGGCGCGACGGCCGCGCATGC
GCAGGACGTCGCGCGCATCGCGGCCGTCAATTCGGATCGGATCCTGCGCGAATCCGCGCCCGCGAAGGCCGCGCAAACGA
AGCTCGAAGCCGAGTTCGCGAAGCGCGACAAGGATCTGCAGGACATGGCCGCGCGCCTGAAGTCGATGTCCGACGCGCTC
GACCGGAACGGTCCGACGATGTCGCCCAACGACCGCGCGCAGAAGCAGCGCGACCTCGCGCAGCTCGACACCGATTTCCA
GCGCAAGCAGCGCGAGTTCCGCGAGGACCTGAACCAGCGCCGCAACGAGGAGCTCGCGGCGGTGCTCGACAAGGCGAACA
AGGTGATCAAGCAGATCGCCGAGCAGCAGAACTACGATCTGATCGTGCAGGAAGCGGTGTACGTGAGTCCGCGCATCGAC
ATCACCGACAAGGTGCTGAAGGCGCTCGCATCGCCTTCGAGCCTGTCGAACTGA

Upstream 100 bases:

>100_bases
CTGCAGAAGCACGAAGGCGATCAGTATCAGAAATTCCAGTTCCAGATCGGGACGGCATTCTGATCGATCAGGCACTGACT
ACAGCATCGAGAGGGTAATC

Downstream 100 bases:

>100_bases
ACGGAGCGAACGTCGAATGGCATTGACGCTTGAGGCGCTCGTCGCGCGGTTCGGCGGCGAGATCGTCGGCGACGGCCGGC
GCGAGGTCGGCGGTCTCGCG

Product: OmpH/HlpA family outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MLTGKFSKRVMCALALAAALGATAAHAQDVARIAAVNSDRILRESAPAKAAQTKLEAEFAKRDKDLQDMAARLKSMSDAL
DRNGPTMSPNDRAQKQRDLAQLDTDFQRKQREFREDLNQRRNEELAAVLDKANKVIKQIAEQQNYDLIVQEAVYVSPRID
ITDKVLKALASPSSLSN

Sequences:

>Translated_177_residues
MLTGKFSKRVMCALALAAALGATAAHAQDVARIAAVNSDRILRESAPAKAAQTKLEAEFAKRDKDLQDMAARLKSMSDAL
DRNGPTMSPNDRAQKQRDLAQLDTDFQRKQREFREDLNQRRNEELAAVLDKANKVIKQIAEQQNYDLIVQEAVYVSPRID
ITDKVLKALASPSSLSN
>Mature_177_residues
MLTGKFSKRVMCALALAAALGATAAHAQDVARIAAVNSDRILRESAPAKAAQTKLEAEFAKRDKDLQDMAARLKSMSDAL
DRNGPTMSPNDRAQKQRDLAQLDTDFQRKQREFREDLNQRRNEELAAVLDKANKVIKQIAEQQNYDLIVQEAVYVSPRID
ITDKVLKALASPSSLSN

Specific function: Molecular chaperone that interacts specifically with outer membrane proteins, thus maintaining the solubility of early folding intermediates during passage through the periplasm [H]

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the skp family [H]

Homologues:

None

Paralogues:

None

Copy number: 580 Molecules/Cell In: Growth-Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005632 [H]

Pfam domain/function: PF03938 OmpH [H]

EC number: NA

Molecular weight: Translated: 19624; Mature: 19624

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTGKFSKRVMCALALAAALGATAAHAQDVARIAAVNSDRILRESAPAKAAQTKLEAEFA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHH
KRDKDLQDMAARLKSMSDALDRNGPTMSPNDRAQKQRDLAQLDTDFQRKQREFREDLNQR
HCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNEELAAVLDKANKVIKQIAEQQNYDLIVQEAVYVSPRIDITDKVLKALASPSSLSN
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLTGKFSKRVMCALALAAALGATAAHAQDVARIAAVNSDRILRESAPAKAAQTKLEAEFA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHH
KRDKDLQDMAARLKSMSDALDRNGPTMSPNDRAQKQRDLAQLDTDFQRKQREFREDLNQR
HCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNEELAAVLDKANKVIKQIAEQQNYDLIVQEAVYVSPRIDITDKVLKALASPSSLSN
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]