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The map label for this gene is dadA [H]

Identifier: 83719394

GI number: 83719394

Start: 1866384

End: 1867670

Strand: Reverse

Name: dadA [H]

Synonym: BTH_I1656

Alternate gene names: 83719394

Gene position: 1867670-1866384 (Counterclockwise)

Preceding gene: 83720653

Following gene: 83718535

Centisome position: 49.03

GC content: 67.91

Gene sequence:

>1287_bases
ATGCGTGTGGTTATTTTGGGCAGTGGCGTGGTTGGCGTGGCAAGCGCCTATTATCTGGCGCGCGCGGGCCATGAAGTCAC
GGTGATCGACCGCGAGGCCGGCCCCGCCCTTGACACGAGCTTTGCGAACGCGGGCCAGATCTCGCCCGGCTACGCGGCGC
CGTGGGCCGCGCCCGGCGTGCCGCTGAAGGCCGTCAAGTGGATGTTCGAGAAGCACGCGCCGCTCGCGATCCGCCTCGAC
GGCACGCGCTTCCAACTGCAATGGATGTGGCAGATGCTGCGCAACTGCACGACCGAGCGCTATGCGCTGAACAAGGGCCG
GATGGTGCGCCTTGCCGAATACAGCCGCGATTGCCTGCAGGCGCTGCGCGCGGAGACGGACATCCAGTATGAAGGCCGCA
CGGGCGGCACGCTGCAGGTCTTCCGCACGCAGCAGCAACTCGACGGCGCCGCGAAGGACATCGCCGTGCTGCGGGAAGCG
AACGTGCCGTTCGAGCTGCTGTCGAGCGACGAACTGAAGAAAGCCGAGCCGGCGCTCGCCGCGGTGTCGCACAAGTTGAC
GGGCGGCCTGCGCCTGCCGGGCGACGAAACGGGCGACTGCCAGCTCTTCACGACGCGTCTCGCCGCGCTCGCCGAGCAGC
TCGGCGTGAAGTTCCGCTTCAACACGCGCATCGATGCGCTCGCCGTCGCGGGCGGCAAGATCGCGGGCGTCCAGTGCGGC
GGCGAAATGGTGCGCGCCGACGCCTACGTGGTCGCGCTCGGCGCGTTCTCGACGAACCTCGTCGCGAATCTCGTGAAGAT
TCCGGTGTATCCGCTGAAAGGCTATTCGATCACCGCGCCGATCGTCGACGCGGCGAAAGCGCCCGTGTCGACCGTGCTCG
ACGAGACCTACAAGATCGCGATCACGCGTTTCGACGAGCGGATTCGCGTCGGCGGAATGGCGGAGATCGTCGGCTTCGAC
AAGCGACTGCGCCAGGCGCGCCGCGACACGCTCGAAATGTGCGTGAACGACCTGTTCCCGGGCGGCGGCGACACGGCGAA
CGCGTCGTTCTGGACCGGCCTGCGGCCGATGACGCCGGACGGCACGCCGATCGTCGGCCGCACGCCCGTGCCGAATCTGT
TCCTGAACACGGGCCACGGCACGCTCGGCTGGACGATGTCGTGCGGCTCCGGCCAGTTGCTCGCCGATCTGATGTCCGGC
AAGAAGCCCGCGATCCGCGCGGACGATCTGTCGGTGCATCGCTACCTGAGCGAGACGGACGGCGAGCATCGCCCCGCGTA
CGCATGA

Upstream 100 bases:

>100_bases
ATCAACCATAACATAGCGCAAAAAACTAGGTCGAACGGAAATCGCAGAGCGCATCGGATGCGCCGCGCGCCGTCCGGCGT
TTTCTCTATCCGGAGCAGCT

Downstream 100 bases:

>100_bases
CGCGCTGACGCGCGACCGAGGCGGCCCGTGTGCAGCGGCCGCCTCTCCAAAAAGAACGGTGCCCGAGGGCGCCGTTCCGC
GTTGCGGCGCCTGGCGGCCG

Product: D-amino acid dehydrogenase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MRVVILGSGVVGVASAYYLARAGHEVTVIDREAGPALDTSFANAGQISPGYAAPWAAPGVPLKAVKWMFEKHAPLAIRLD
GTRFQLQWMWQMLRNCTTERYALNKGRMVRLAEYSRDCLQALRAETDIQYEGRTGGTLQVFRTQQQLDGAAKDIAVLREA
NVPFELLSSDELKKAEPALAAVSHKLTGGLRLPGDETGDCQLFTTRLAALAEQLGVKFRFNTRIDALAVAGGKIAGVQCG
GEMVRADAYVVALGAFSTNLVANLVKIPVYPLKGYSITAPIVDAAKAPVSTVLDETYKIAITRFDERIRVGGMAEIVGFD
KRLRQARRDTLEMCVNDLFPGGGDTANASFWTGLRPMTPDGTPIVGRTPVPNLFLNTGHGTLGWTMSCGSGQLLADLMSG
KKPAIRADDLSVHRYLSETDGEHRPAYA

Sequences:

>Translated_428_residues
MRVVILGSGVVGVASAYYLARAGHEVTVIDREAGPALDTSFANAGQISPGYAAPWAAPGVPLKAVKWMFEKHAPLAIRLD
GTRFQLQWMWQMLRNCTTERYALNKGRMVRLAEYSRDCLQALRAETDIQYEGRTGGTLQVFRTQQQLDGAAKDIAVLREA
NVPFELLSSDELKKAEPALAAVSHKLTGGLRLPGDETGDCQLFTTRLAALAEQLGVKFRFNTRIDALAVAGGKIAGVQCG
GEMVRADAYVVALGAFSTNLVANLVKIPVYPLKGYSITAPIVDAAKAPVSTVLDETYKIAITRFDERIRVGGMAEIVGFD
KRLRQARRDTLEMCVNDLFPGGGDTANASFWTGLRPMTPDGTPIVGRTPVPNLFLNTGHGTLGWTMSCGSGQLLADLMSG
KKPAIRADDLSVHRYLSETDGEHRPAYA
>Mature_428_residues
MRVVILGSGVVGVASAYYLARAGHEVTVIDREAGPALDTSFANAGQISPGYAAPWAAPGVPLKAVKWMFEKHAPLAIRLD
GTRFQLQWMWQMLRNCTTERYALNKGRMVRLAEYSRDCLQALRAETDIQYEGRTGGTLQVFRTQQQLDGAAKDIAVLREA
NVPFELLSSDELKKAEPALAAVSHKLTGGLRLPGDETGDCQLFTTRLAALAEQLGVKFRFNTRIDALAVAGGKIAGVQCG
GEMVRADAYVVALGAFSTNLVANLVKIPVYPLKGYSITAPIVDAAKAPVSTVLDETYKIAITRFDERIRVGGMAEIVGFD
KRLRQARRDTLEMCVNDLFPGGGDTANASFWTGLRPMTPDGTPIVGRTPVPNLFLNTGHGTLGWTMSCGSGQLLADLMSG
KKPAIRADDLSVHRYLSETDGEHRPAYA

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=415, Percent_Identity=73.2530120481928, Blast_Score=641, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 46272; Mature: 46272

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVILGSGVVGVASAYYLARAGHEVTVIDREAGPALDTSFANAGQISPGYAAPWAAPGV
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLKAVKWMFEKHAPLAIRLDGTRFQLQWMWQMLRNCTTERYALNKGRMVRLAEYSRDCLQ
CHHHHHHHHHCCCCEEEEECCCEEHHHHHHHHHHHCCHHHEECCCCCEEEHHHHHHHHHH
ALRAETDIQYEGRTGGTLQVFRTQQQLDGAAKDIAVLREANVPFELLSSDELKKAEPALA
HHHHCCCEEECCCCCCEEEEEECHHHHCCHHHHHHHHHCCCCCHHHHCCCCHHHHCHHHH
AVSHKLTGGLRLPGDETGDCQLFTTRLAALAEQLGVKFRFNTRIDALAVAGGKIAGVQCG
HHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCEEEEEECCCEEEEEECC
GEMVRADAYVVALGAFSTNLVANLVKIPVYPLKGYSITAPIVDAAKAPVSTVLDETYKIA
CCEEECCEEEEEEECHHHHHHHHHHHCCCEECCCCEEECCHHHHHCCCHHHHHCCCEEEE
ITRFDERIRVGGMAEIVGFDKRLRQARRDTLEMCVNDLFPGGGDTANASFWTGLRPMTPD
EEECCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
GTPIVGRTPVPNLFLNTGHGTLGWTMSCGSGQLLADLMSGKKPAIRADDLSVHRYLSETD
CCEEECCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHCCCCCCEECCCHHHHHHHHHCC
GEHRPAYA
CCCCCCCC
>Mature Secondary Structure
MRVVILGSGVVGVASAYYLARAGHEVTVIDREAGPALDTSFANAGQISPGYAAPWAAPGV
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLKAVKWMFEKHAPLAIRLDGTRFQLQWMWQMLRNCTTERYALNKGRMVRLAEYSRDCLQ
CHHHHHHHHHCCCCEEEEECCCEEHHHHHHHHHHHCCHHHEECCCCCEEEHHHHHHHHHH
ALRAETDIQYEGRTGGTLQVFRTQQQLDGAAKDIAVLREANVPFELLSSDELKKAEPALA
HHHHCCCEEECCCCCCEEEEEECHHHHCCHHHHHHHHHCCCCCHHHHCCCCHHHHCHHHH
AVSHKLTGGLRLPGDETGDCQLFTTRLAALAEQLGVKFRFNTRIDALAVAGGKIAGVQCG
HHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCEEEEEECCCEEEEEECC
GEMVRADAYVVALGAFSTNLVANLVKIPVYPLKGYSITAPIVDAAKAPVSTVLDETYKIA
CCEEECCEEEEEEECHHHHHHHHHHHCCCEECCCCEEECCHHHHHCCCHHHHHCCCEEEE
ITRFDERIRVGGMAEIVGFDKRLRQARRDTLEMCVNDLFPGGGDTANASFWTGLRPMTPD
EEECCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
GTPIVGRTPVPNLFLNTGHGTLGWTMSCGSGQLLADLMSGKKPAIRADDLSVHRYLSETD
CCEEECCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHCCCCCCEECCCHHHHHHHHHCC
GEHRPAYA
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA