Click here to switch to the map view.

The map label for this gene is ybgC [C]

Identifier: 83719384

GI number: 83719384

Start: 1553925

End: 1554407

Strand: Reverse

Name: ybgC [C]

Synonym: BTH_I1377

Alternate gene names: 83719384

Gene position: 1554407-1553925 (Counterclockwise)

Preceding gene: 83720333

Following gene: 83719386

Centisome position: 40.81

GC content: 66.46

Gene sequence:

>483_bases
ATGATCGAACCCAGCCGACAGCCCGACGCGGCACCCGACTTCGCGTGGCCGGTCCGCGTGTATTACGAGGACACCGACGC
CGGCGGCATCGTCTACTACGCGAATTACCTGAGATTCTTCGAACGCGCGCGCACCGAGTGGCTGCGCGCATGCGGAATCG
ACCAAAGCCGGATCGCCGACGAAACGGGCGCGATTTTCATCGTCCGCCAAGCGGACCTCGACTATCGCGCGCCGGCGCGG
CTCGACGACACGCTGCAAATCATCTGCAGAATCGCGCGCATCGGCCGCGCGAGCGTCGAATTCGAACAACAGGCGTGGCG
GGCAGACACGCTGCTCGTCGCGGCCGACATTCGGATCGGCTGCGTCGACCGCTCGGCGTTCAAGCCGACCGCGATCCCGG
CCCCCGTCTTCGCCGCACTCGAACGCGGGCCGGCCATAAAGCCGGCAAGCCGTGTCAACGGCGCATGCGTGAGTGCCGTT
TAG

Upstream 100 bases:

>100_bases
GGCTGATCGCGCCGCCGGGCCGTATAGGCGGCCCGGCGAAGGCAACATTCCGTTACGAATCAGGGGAATCGGGGTCGCCT
GTTCCGGTAGAATGCGCGCC

Downstream 100 bases:

>100_bases
ACAAAGCCGATGAACTCGACCCCATGATCCGCCACTAAGCAGGATTCGGCGGAGCGTTTCCGGCGACGCACCGCGCGAGC
GCGGCGCGCAGCCGACCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MIEPSRQPDAAPDFAWPVRVYYEDTDAGGIVYYANYLRFFERARTEWLRACGIDQSRIADETGAIFIVRQADLDYRAPAR
LDDTLQIICRIARIGRASVEFEQQAWRADTLLVAADIRIGCVDRSAFKPTAIPAPVFAALERGPAIKPASRVNGACVSAV

Sequences:

>Translated_160_residues
MIEPSRQPDAAPDFAWPVRVYYEDTDAGGIVYYANYLRFFERARTEWLRACGIDQSRIADETGAIFIVRQADLDYRAPAR
LDDTLQIICRIARIGRASVEFEQQAWRADTLLVAADIRIGCVDRSAFKPTAIPAPVFAALERGPAIKPASRVNGACVSAV
>Mature_160_residues
MIEPSRQPDAAPDFAWPVRVYYEDTDAGGIVYYANYLRFFERARTEWLRACGIDQSRIADETGAIFIVRQADLDYRAPAR
LDDTLQIICRIARIGRASVEFEQQAWRADTLLVAADIRIGCVDRSAFKPTAIPAPVFAALERGPAIKPASRVNGACVSAV

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=130, Percent_Identity=46.9230769230769, Blast_Score=117, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 17779; Mature: 17779

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEPSRQPDAAPDFAWPVRVYYEDTDAGGIVYYANYLRFFERARTEWLRACGIDQSRIAD
CCCCCCCCCCCCCCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
ETGAIFIVRQADLDYRAPARLDDTLQIICRIARIGRASVEFEQQAWRADTLLVAADIRIG
CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEECCEEE
CVDRSAFKPTAIPAPVFAALERGPAIKPASRVNGACVSAV
EECCCCCCCCCCCHHHHHHHHCCCCCCCHHHCCCEEECCC
>Mature Secondary Structure
MIEPSRQPDAAPDFAWPVRVYYEDTDAGGIVYYANYLRFFERARTEWLRACGIDQSRIAD
CCCCCCCCCCCCCCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
ETGAIFIVRQADLDYRAPARLDDTLQIICRIARIGRASVEFEQQAWRADTLLVAADIRIG
CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEECCEEE
CVDRSAFKPTAIPAPVFAALERGPAIKPASRVNGACVSAV
EECCCCCCCCCCCHHHHHHHHCCCCCCCHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]