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The map label for this gene is ydhP [H]

Identifier: 83719383

GI number: 83719383

Start: 1575640

End: 1576809

Strand: Reverse

Name: ydhP [H]

Synonym: BTH_I1400

Alternate gene names: 83719383

Gene position: 1576809-1575640 (Counterclockwise)

Preceding gene: 83721520

Following gene: 83720337

Centisome position: 41.39

GC content: 71.03

Gene sequence:

>1170_bases
ATGCCGCTGCCCCTCTTCGCCCTTGCCGTCGCCGCGTTTGGTATCGGTACCACCGAGTTCGTCATCATGGGCCTGCTGCC
GAACGTCGCGCGCGACCTCGGCGTATCGATTCCGGCGGCGGGCATGCTCGTGTCCGGCTATGCGCTCGGCGTGACGATCG
GCGCGCCGATCCTCGCCGTCGTCACCGCGAGAATGCCGCGCAAGGCGGCGCTTCTCGCGCTGATCGGCGTGTTCATCGTC
GGCAATCTCTTTTGCGCGATCGCGCCCGGCTACGCGACGCTGATGATCGCGCGCGTCGTCACCGCGTTCTGTCACGGCGC
GTTCTTCGGGATCGGCTCGGTCGTCGCGAGCAGCCTCGTCGCGCCGAACAAGCGCGCGCAGGCGATCGCGCTGATGTTCA
CCGGCCTGACGCTCGCGAACGTGCTCGGCGTGCCGCTCGGCACCGCGCTCGGCCAGGCGTTCGGCTGGCGCGCGACGTTC
TGGGCCGTCACCGCCATCGGCGCGCTCGCGGCGGCGGCGCTCGCCTTTTGCGTGCCCAAGCGCCTCGAGATGCCCGCGGC
CGGCATCGCGCGCGAGTTCGGCGTATTGCGCAATCCGCAGGTGCTGATGGTGCTCGGCATCAGCGTGCTCGCGTCGGCGA
GCCTTTTCACCGTGTTCACGTACATCACGCCGATCCTCGAGGACGTGACGGGCTTCACGCCGCGCCAGGTCACGCTCGTG
CTGCTGCTGTTCGGCCTCGGCCTGACGGTCGGCGGCACCGTCGGCGGCAGGCTCGCCGACTGGCGGCGCATGCCGTCGCT
CGTCGCGACGCTCGCGTCGATCGGCATCGTGCTCGCCGCGTTCGCGGGCACGATGCGTGCGCCGCTGCCCGCGCTCGTGA
CGATCTTCGCATGGGGCGTGCTCGCGTTCGCGATCGTGCCGCCGCTACAGATCCTGATCGTCGATCGTGCGAGCCACGCG
CCGAATCTCGCGTCGACGCTCAACCAGGGCGCGTTCAACCTCGGCAACGCGCTCGGCGCGTGGCTCGGCGGCACCGCGAT
CCACGCGGGCGTGCCGCTCGCGAAACTGCCGTGGGCGGGCGCCGCGCTCGCGATGGCGGCCCTCGCGCTCACGCTGTGGT
CCGCGTCGCTCGAGCGGCGAACGGTTCCAGCGCCAGCCGAATGCGCGTGA

Upstream 100 bases:

>100_bases
CGGGGTTTTCCCTGAGATAGAATCGCGGCTGTTCCGCTCGCTTCCATCGGCGCGCCGCATCCCGCGACGCCGGACGCGGC
GTTCCTCCCGCGAGTCCTCC

Downstream 100 bases:

>100_bases
CGCGCAGAGAGCGCGTGGCGCGCGTCACGCATGGGATGCATGACATGCGCGACGCACACGCCACTCGCGGCGCGGCGTCG
CCTACGCCACGCACGCGTGC

Product: major facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MPLPLFALAVAAFGIGTTEFVIMGLLPNVARDLGVSIPAAGMLVSGYALGVTIGAPILAVVTARMPRKAALLALIGVFIV
GNLFCAIAPGYATLMIARVVTAFCHGAFFGIGSVVASSLVAPNKRAQAIALMFTGLTLANVLGVPLGTALGQAFGWRATF
WAVTAIGALAAAALAFCVPKRLEMPAAGIAREFGVLRNPQVLMVLGISVLASASLFTVFTYITPILEDVTGFTPRQVTLV
LLLFGLGLTVGGTVGGRLADWRRMPSLVATLASIGIVLAAFAGTMRAPLPALVTIFAWGVLAFAIVPPLQILIVDRASHA
PNLASTLNQGAFNLGNALGAWLGGTAIHAGVPLAKLPWAGAALAMAALALTLWSASLERRTVPAPAECA

Sequences:

>Translated_389_residues
MPLPLFALAVAAFGIGTTEFVIMGLLPNVARDLGVSIPAAGMLVSGYALGVTIGAPILAVVTARMPRKAALLALIGVFIV
GNLFCAIAPGYATLMIARVVTAFCHGAFFGIGSVVASSLVAPNKRAQAIALMFTGLTLANVLGVPLGTALGQAFGWRATF
WAVTAIGALAAAALAFCVPKRLEMPAAGIAREFGVLRNPQVLMVLGISVLASASLFTVFTYITPILEDVTGFTPRQVTLV
LLLFGLGLTVGGTVGGRLADWRRMPSLVATLASIGIVLAAFAGTMRAPLPALVTIFAWGVLAFAIVPPLQILIVDRASHA
PNLASTLNQGAFNLGNALGAWLGGTAIHAGVPLAKLPWAGAALAMAALALTLWSASLERRTVPAPAECA
>Mature_388_residues
PLPLFALAVAAFGIGTTEFVIMGLLPNVARDLGVSIPAAGMLVSGYALGVTIGAPILAVVTARMPRKAALLALIGVFIVG
NLFCAIAPGYATLMIARVVTAFCHGAFFGIGSVVASSLVAPNKRAQAIALMFTGLTLANVLGVPLGTALGQAFGWRATFW
AVTAIGALAAAALAFCVPKRLEMPAAGIAREFGVLRNPQVLMVLGISVLASASLFTVFTYITPILEDVTGFTPRQVTLVL
LLFGLGLTVGGTVGGRLADWRRMPSLVATLASIGIVLAAFAGTMRAPLPALVTIFAWGVLAFAIVPPLQILIVDRASHAP
NLASTLNQGAFNLGNALGAWLGGTAIHAGVPLAKLPWAGAALAMAALALTLWSASLERRTVPAPAECA

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=379, Percent_Identity=46.4379947229551, Blast_Score=291, Evalue=3e-80,
Organism=Escherichia coli, GI1786595, Length=385, Percent_Identity=35.5844155844156, Blast_Score=230, Evalue=1e-61,
Organism=Escherichia coli, GI1787808, Length=387, Percent_Identity=30.749354005168, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI145693198, Length=333, Percent_Identity=25.8258258258258, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 39738; Mature: 39607

Theoretical pI: Translated: 11.09; Mature: 11.09

Prosite motif: PS00133 CARBOXYPEPT_ZN_2 ; PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PLPLFALAVAAFGIGTTEFVIMGLLPNVARDLGVSIPAAGMLVSGYALGVTIGAPILAV
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH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HHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]