| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is arnT2 [H]
Identifier: 83719337
GI number: 83719337
Start: 2469107
End: 2470912
Strand: Reverse
Name: arnT2 [H]
Synonym: BTH_I2195
Alternate gene names: 83719337
Gene position: 2470912-2469107 (Counterclockwise)
Preceding gene: 83720250
Following gene: 83718413
Centisome position: 64.87
GC content: 68.72
Gene sequence:
>1806_bases TTGCGCCCCGCTTGCATCCGGTTTCGCGCCGCGTTCCGCTCGCCGCGGACGATCGCCGAAATCCGCCCGATCGAATCTGA CAAACTCAATACGAACTCTATGAACGATACGCCGACGAGGCTACCGCTCGATCGCGCCGCGCCCGTGACGCTGAACCGCG CCGCGCTCCTCTTTCTCGTCGCGGCCCTCGCCGTGATCTGGTTCGCGCCGCTCGGCCTGCGCCACCTGATCCCGAGCGAC GAAGGCCGCTACGCCGAAATGGCCCGCGAGATGTTCGTCACGGGCGACTGGATCACGCCGCGCTACAACGGCTACAAGTA TTTCGAGAAGCCGCCGCTGCAGACCTGGCTCAACGCGCTCACGTTCGCGTGGTTCGGCGTCGGCGAATGGCAGGCGCGCC TGTACACGGCGCTCGCGAGCTTCGCGGGCGTGCTCTTCGTCGGCTACGCCGGCGCGCGCGTGTTCAACCCGCGCGCGGGC TTCTTCGCGGCGCTCGTGCTCGCGTGCTCGCCGTACTGGAACCTGATGGGCCACTTCAACGCGCTCGACATGGGGCTGTC GCTGTGGATGACGGTCACCCTCTGCGCGCTCCTCCTCGCGCAGCGGCCCGGCATCGGCAAGCGCGCCGAGCGGGGCTGGA TGTGGCTCTGCTGGGCGTCGATGGCGCTCGCCGTGCTGTCGAAGGGCCTCATCGGGCTGATCCTGCCCGGCGCCGTGCTC GTGCTCTATACGCTCGCGTCGCGCGACTGGGCGCTGTGGAAGCGCCTGCACCTCGTGAGCGGCCTCGCCATCTTCTTCGC GATCGCGACGCCGTGGTTCGCGCTCGTGCAATCGCGCAACCCCGAGTTCTTCAACTTCTTCTTCATCGTCCAGCAGTTCC GGCGCTACCTGACGCCCGAGCAGAACCGCCCCGGCGCGTTCTACTACTTCGTGCCGGTGCTCGTCGTCGGCTTCCTGCCG TGGCTGTCCGTGAGCGTGCAGGGCGTGCGCCACGCGCTGCGCATTCCGCGTCAGCCGAACGGCTTCGCGCCGATGCTCGT GCTGGCTACGTGGAGCGCGTTCATCTTCCTGTTCTTCAGCGCGTCGCACTCGAAGCTGATCTCGTACGTGCTGCCCGTGG CGCCCGCGCTCGCGCTGATGATCGGCACGTATCTGCCGCTCGTGCCGCGCGAGCGGTTCCGCCGCCACCTGTTCGGCTAC CTGGTGTTCCTCGTCGCCGCCGCGTTCGGCACGCTCTTCCTCGAGCGTCTGGGCGACGCGCGCACGCCGAATTCGCAGTA CCTGGAGTTCCAGAAGTGGGTGTACGCGGCGCTCGCCACCGCGTTCGCGCTCACGCTCGTCGCCGTGTGGCTCAATCGAC GCGGCCGCGCCGGCATCGCCGCGGCGGCCGTGGCGTTCGGCGCCGGCTGGCTGCTCCTCGGCACGATCGGCGGCACCGGT CACGACGCGTTCGGCCGCTACAGCTCGGGCGCGCTCCTCGCGCCCGCGATCCGCGAGGAGCTCGCGAAGCTGCCGCCCGA CACGCCGTTCTACTCGGTCGACACGCTCGACCACACGCTGCCGTTCTACGTCGGCCACACGATGATCATGGTCGAGCGCA AGGACGAACTCACGTTCGGCATCTCGGTTGAGCCCGACAAGTGGGTTCCGACCGTCGCCGAATGGGAACGACGCTGGCGC GCCGATCGCTACGCGCTCGCGCTGATGTCGCCCGACCGCTACAAGCAGTTGTCGGCGGCGGGTCTGCCGATGCGCGTCGT CGCGCGCGACAACCGGCGCGTCGTCGTCGAGAAGCCGCAATCCTGA
Upstream 100 bases:
>100_bases ATGGCCGAAGGCCGGAAGGTCGCCGCGGCGCTGCTGATCGAACGTTAAGCGAGCGTTAAGCCGCACCGCGCTAAAACACC CGGCGGCGCTTGCATCCCGC
Downstream 100 bases:
>100_bases GCCGCGAAGGACCCGAATCGATGAACCCCGTCTCCCTCTTTTGCATCGTCACGGGCGTGATGCTGAACGCCTGCGCGCAA CTGCTGCTCAAGGCCGGCGT
Product: dolichyl-phosphate-mannose-protein mannosyltransferase family protein
Products: NA
Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase 2; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase 2 [H]
Number of amino acids: Translated: 601; Mature: 601
Protein sequence:
>601_residues MRPACIRFRAAFRSPRTIAEIRPIESDKLNTNSMNDTPTRLPLDRAAPVTLNRAALLFLVAALAVIWFAPLGLRHLIPSD EGRYAEMAREMFVTGDWITPRYNGYKYFEKPPLQTWLNALTFAWFGVGEWQARLYTALASFAGVLFVGYAGARVFNPRAG FFAALVLACSPYWNLMGHFNALDMGLSLWMTVTLCALLLAQRPGIGKRAERGWMWLCWASMALAVLSKGLIGLILPGAVL VLYTLASRDWALWKRLHLVSGLAIFFAIATPWFALVQSRNPEFFNFFFIVQQFRRYLTPEQNRPGAFYYFVPVLVVGFLP WLSVSVQGVRHALRIPRQPNGFAPMLVLATWSAFIFLFFSASHSKLISYVLPVAPALALMIGTYLPLVPRERFRRHLFGY LVFLVAAAFGTLFLERLGDARTPNSQYLEFQKWVYAALATAFALTLVAVWLNRRGRAGIAAAAVAFGAGWLLLGTIGGTG HDAFGRYSSGALLAPAIREELAKLPPDTPFYSVDTLDHTLPFYVGHTMIMVERKDELTFGISVEPDKWVPTVAEWERRWR ADRYALALMSPDRYKQLSAAGLPMRVVARDNRRVVVEKPQS
Sequences:
>Translated_601_residues MRPACIRFRAAFRSPRTIAEIRPIESDKLNTNSMNDTPTRLPLDRAAPVTLNRAALLFLVAALAVIWFAPLGLRHLIPSD EGRYAEMAREMFVTGDWITPRYNGYKYFEKPPLQTWLNALTFAWFGVGEWQARLYTALASFAGVLFVGYAGARVFNPRAG FFAALVLACSPYWNLMGHFNALDMGLSLWMTVTLCALLLAQRPGIGKRAERGWMWLCWASMALAVLSKGLIGLILPGAVL VLYTLASRDWALWKRLHLVSGLAIFFAIATPWFALVQSRNPEFFNFFFIVQQFRRYLTPEQNRPGAFYYFVPVLVVGFLP WLSVSVQGVRHALRIPRQPNGFAPMLVLATWSAFIFLFFSASHSKLISYVLPVAPALALMIGTYLPLVPRERFRRHLFGY LVFLVAAAFGTLFLERLGDARTPNSQYLEFQKWVYAALATAFALTLVAVWLNRRGRAGIAAAAVAFGAGWLLLGTIGGTG HDAFGRYSSGALLAPAIREELAKLPPDTPFYSVDTLDHTLPFYVGHTMIMVERKDELTFGISVEPDKWVPTVAEWERRWR ADRYALALMSPDRYKQLSAAGLPMRVVARDNRRVVVEKPQS >Mature_601_residues MRPACIRFRAAFRSPRTIAEIRPIESDKLNTNSMNDTPTRLPLDRAAPVTLNRAALLFLVAALAVIWFAPLGLRHLIPSD EGRYAEMAREMFVTGDWITPRYNGYKYFEKPPLQTWLNALTFAWFGVGEWQARLYTALASFAGVLFVGYAGARVFNPRAG FFAALVLACSPYWNLMGHFNALDMGLSLWMTVTLCALLLAQRPGIGKRAERGWMWLCWASMALAVLSKGLIGLILPGAVL VLYTLASRDWALWKRLHLVSGLAIFFAIATPWFALVQSRNPEFFNFFFIVQQFRRYLTPEQNRPGAFYYFVPVLVVGFLP WLSVSVQGVRHALRIPRQPNGFAPMLVLATWSAFIFLFFSASHSKLISYVLPVAPALALMIGTYLPLVPRERFRRHLFGY LVFLVAAAFGTLFLERLGDARTPNSQYLEFQKWVYAALATAFALTLVAVWLNRRGRAGIAAAAVAFGAGWLLLGTIGGTG HDAFGRYSSGALLAPAIREELAKLPPDTPFYSVDTLDHTLPFYVGHTMIMVERKDELTFGISVEPDKWVPTVAEWERRWR ADRYALALMSPDRYKQLSAAGLPMRVVARDNRRVVVEKPQS
Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 83 family [H]
Homologues:
Organism=Escherichia coli, GI1788591, Length=383, Percent_Identity=27.6762402088773, Blast_Score=141, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022839 - InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: =2.4.2.43 [H]
Molecular weight: Translated: 67579; Mature: 67579
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPACIRFRAAFRSPRTIAEIRPIESDKLNTNSMNDTPTRLPLDRAAPVTLNRAALLFLV CCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH AALAVIWFAPLGLRHLIPSDEGRYAEMAREMFVTGDWITPRYNGYKYFEKPPLQTWLNAL HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHH TFAWFGVGEWQARLYTALASFAGVLFVGYAGARVFNPRAGFFAALVLACSPYWNLMGHFN HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHCHHHHHHHCCH ALDMGLSLWMTVTLCALLLAQRPGIGKRAERGWMWLCWASMALAVLSKGLIGLILPGAVL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHH VLYTLASRDWALWKRLHLVSGLAIFFAIATPWFALVQSRNPEFFNFFFIVQQFRRYLTPE HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC QNRPGAFYYFVPVLVVGFLPWLSVSVQGVRHALRIPRQPNGFAPMLVLATWSAFIFLFFS CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC ASHSKLISYVLPVAPALALMIGTYLPLVPRERFRRHLFGYLVFLVAAAFGTLFLERLGDA CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RTPNSQYLEFQKWVYAALATAFALTLVAVWLNRRGRAGIAAAAVAFGAGWLLLGTIGGTG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEECCCCC HDAFGRYSSGALLAPAIREELAKLPPDTPFYSVDTLDHTLPFYVGHTMIMVERKDELTFG CHHCCCCCCCCEECHHHHHHHHHCCCCCCCEEECCHHCCCHHHHCCEEEEEEECCCEEEE ISVEPDKWVPTVAEWERRWRADRYALALMSPDRYKQLSAAGLPMRVVARDNRRVVVEKPQ EECCCCCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCEEEEECCCCEEEEECCC S C >Mature Secondary Structure MRPACIRFRAAFRSPRTIAEIRPIESDKLNTNSMNDTPTRLPLDRAAPVTLNRAALLFLV CCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH AALAVIWFAPLGLRHLIPSDEGRYAEMAREMFVTGDWITPRYNGYKYFEKPPLQTWLNAL HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHH TFAWFGVGEWQARLYTALASFAGVLFVGYAGARVFNPRAGFFAALVLACSPYWNLMGHFN HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHCHHHHHHHCCH ALDMGLSLWMTVTLCALLLAQRPGIGKRAERGWMWLCWASMALAVLSKGLIGLILPGAVL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHH VLYTLASRDWALWKRLHLVSGLAIFFAIATPWFALVQSRNPEFFNFFFIVQQFRRYLTPE HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC QNRPGAFYYFVPVLVVGFLPWLSVSVQGVRHALRIPRQPNGFAPMLVLATWSAFIFLFFS CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC ASHSKLISYVLPVAPALALMIGTYLPLVPRERFRRHLFGYLVFLVAAAFGTLFLERLGDA CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RTPNSQYLEFQKWVYAALATAFALTLVAVWLNRRGRAGIAAAAVAFGAGWLLLGTIGGTG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEECCCCC HDAFGRYSSGALLAPAIREELAKLPPDTPFYSVDTLDHTLPFYVGHTMIMVERKDELTFG CHHCCCCCCCCEECHHHHHHHHHCCCCCCCEEECCHHCCCHHHHCCEEEEEEECCCEEEE ISVEPDKWVPTVAEWERRWRADRYALALMSPDRYKQLSAAGLPMRVVARDNRRVVVEKPQ EECCCCCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCEEEEECCCCEEEEECCC S C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA