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The map label for this gene is tcp [H]

Identifier: 83719305

GI number: 83719305

Start: 2826207

End: 2828057

Strand: Reverse

Name: tcp [H]

Synonym: BTH_I2470

Alternate gene names: 83719305

Gene position: 2828057-2826207 (Counterclockwise)

Preceding gene: 83720258

Following gene: 83718478

Centisome position: 74.24

GC content: 70.39

Gene sequence:

>1851_bases
ATGCTGCTGAAGAACCTCTCGATCAGGACACGCCTCGCCGTCACGATGACGCTCCTTTCCGTTCTGCTGTGCGTCGTCGG
CGCACTGGGCCTCTTCGGCATGAGCCGGGCCAACGATGCGAACGAGCAAACGTCGTCGAACCAGTTGCCGAGCACGATCG
ACGTCGCGAGCGCCGAGCTGTTCGCCGCGCGCGAGCGCCTCGTGCTCGACCGCGCGGCGCTTCTCGCGGGCACGCCGGAC
GCCGCGCCGACGATCGAGCGCGCGCGCCACATGCGCGGGGTCTCCGATTCGTGGTGGAAAAAGTACCTCGACTTGCCGCG
CAACGGGCAGGAGGATCGCCTCGCGCAGGACGTCGCGGCGAAACGGCAGGTCCTGCAGCGCGAGCTCGACGGATTCGTCG
AGCTCATCAACGCGAACGATCGCGACAGGATCATCGAATCCGCGAAGCGGATGCAGAACGTGTTCAACGATTTCGCGCTC
GCGAGCGAGGCGCTGCGCGCGTTTCAGCTCAAGCAGGCGAGCGTCAATTTCAGCGATGCGCAAAGCGTATATGGGGCGAG
CCGAATCGCCAGCATCGCGGCGCTCGTGCTTGGCCTCGCGATCTCGCTCTATTGCTTCCTGAGCCTGCGCGCGGCGATCG
CGCGGCCGCTCGCCGACGCGCTCGGCCACTTCGACGCGATCGCCGCGGGCGAATTGCGCCGGCCGATCGTCGTCGCGCGG
CGCGACGAGATGGGGCTGCTGCTCGAAGGGCTCGCGAAGATGCAGGCGAGCCTTGCGGACACCGTGCGCTCGGTGCGCGT
CGGCAGCGAATCGATCGCGACGGCGGCCAGGCAGATCGCGGCGGGCAACATCGACCTGTCCTCGCGCACCGAACAGCAGG
CGGCGGCGCTCGAGGAGACGGCCTCGAGCATGGAGGAACTGACGGGCACGGTGCAGCGCAACGCGGACAACGCGCGCCAG
GCGAGCGCGCTGGCCGCGAGCGCATCGGAGATCGCGAACAAGGGCAATGCCGTGGTCGGCCAGGTGGTCGGCACGATGGG
CGACATCAACCAGAGCTCCGCGAAGATCGCCGACATCATCACGATCATCGAGGGAATCGCGTTCCAGACCAACATTCTCG
CGCTGAACGCGGCCGTCGAGGCGGCGCGCGCGGGCGAGGAAGGGCGCGGCTTCGCGGTCGTCGCGGGCGAGGTGCGCAGC
CTCGCGCAGCGTTCGTCGACGGCCGCCAAGGAGATCAAGGAACTGATCGATACGTCGGTCGAGCGCGTGCGCACGGGCTC
GTCGCTCGTCGACGACGCGGGGCGCACGATGAGCGAGGTGATCGGCGCGGTGCAACGCGTGACCGACATCATGGGCGAGA
TCGCGGCGGCGTCTGACGAACAGAGCACCGGCATCGACCAGGTATCGCGCGCCGTGTCGCAGATGGACGAAGTCACGCAG
CAGAACGCGGCGCTCGTCGAGGAGGCCGCGGCGGCCGCGCAATCGCTCGACGAGCAGGCCGCGCGGCTGCGCGAGACCGT
TTCGGTATTCCGCGTCGATGACGGTGACGCGCGCGAGGTCGCGCCGCGTGCGCCAGCGCGGCCTGCGGCCGGCGTCGCGC
ACCGGGCGGGGCGCGACGCCGCGCCGACGCAGGCCGCTGCGCCTTGCGGCGCGGCGGCCGCCGTCGCAAAGGGCAAGGCG
CCTGCGAGGCCCGCGCGTTGCGAATCGGCCGTGAAGGCTGAATCGGCCGCATCTGCGCCGGCGCCCGCCGCCGCCCCGGC
AGCCAAGCCCAAGCCGGCGCCTGCGGCGCCGCGCGCGGTGCCGGCTGCTGCGGCGTCCGCCGCAAGCGACGACGATTGGG
AGACCTTCTGA

Upstream 100 bases:

>100_bases
CTTCCTGTCGAAAGCCGTAAACAAGCATGGCCGTGCAAACGTTTCGCCGTCGCGGAACGGGCCGCCTTCGTCGTCTTTGC
GACGCATCACAGGAAGAACC

Downstream 100 bases:

>100_bases
TATGAACGGGAAAACACATCGGACAACGATCTATCCCCAATTTGATTGAACGACGACGCCCGCTGCCCGCGGGCGTTTTT
GCATCGCAATCGGTCGGTCG

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Citrate chemoreceptor protein [H]

Number of amino acids: Translated: 616; Mature: 616

Protein sequence:

>616_residues
MLLKNLSIRTRLAVTMTLLSVLLCVVGALGLFGMSRANDANEQTSSNQLPSTIDVASAELFAARERLVLDRAALLAGTPD
AAPTIERARHMRGVSDSWWKKYLDLPRNGQEDRLAQDVAAKRQVLQRELDGFVELINANDRDRIIESAKRMQNVFNDFAL
ASEALRAFQLKQASVNFSDAQSVYGASRIASIAALVLGLAISLYCFLSLRAAIARPLADALGHFDAIAAGELRRPIVVAR
RDEMGLLLEGLAKMQASLADTVRSVRVGSESIATAARQIAAGNIDLSSRTEQQAAALEETASSMEELTGTVQRNADNARQ
ASALAASASEIANKGNAVVGQVVGTMGDINQSSAKIADIITIIEGIAFQTNILALNAAVEAARAGEEGRGFAVVAGEVRS
LAQRSSTAAKEIKELIDTSVERVRTGSSLVDDAGRTMSEVIGAVQRVTDIMGEIAAASDEQSTGIDQVSRAVSQMDEVTQ
QNAALVEEAAAAAQSLDEQAARLRETVSVFRVDDGDAREVAPRAPARPAAGVAHRAGRDAAPTQAAAPCGAAAAVAKGKA
PARPARCESAVKAESAASAPAPAAAPAAKPKPAPAAPRAVPAAAASAASDDDWETF

Sequences:

>Translated_616_residues
MLLKNLSIRTRLAVTMTLLSVLLCVVGALGLFGMSRANDANEQTSSNQLPSTIDVASAELFAARERLVLDRAALLAGTPD
AAPTIERARHMRGVSDSWWKKYLDLPRNGQEDRLAQDVAAKRQVLQRELDGFVELINANDRDRIIESAKRMQNVFNDFAL
ASEALRAFQLKQASVNFSDAQSVYGASRIASIAALVLGLAISLYCFLSLRAAIARPLADALGHFDAIAAGELRRPIVVAR
RDEMGLLLEGLAKMQASLADTVRSVRVGSESIATAARQIAAGNIDLSSRTEQQAAALEETASSMEELTGTVQRNADNARQ
ASALAASASEIANKGNAVVGQVVGTMGDINQSSAKIADIITIIEGIAFQTNILALNAAVEAARAGEEGRGFAVVAGEVRS
LAQRSSTAAKEIKELIDTSVERVRTGSSLVDDAGRTMSEVIGAVQRVTDIMGEIAAASDEQSTGIDQVSRAVSQMDEVTQ
QNAALVEEAAAAAQSLDEQAARLRETVSVFRVDDGDAREVAPRAPARPAAGVAHRAGRDAAPTQAAAPCGAAAAVAKGKA
PARPARCESAVKAESAASAPAPAAAPAAKPKPAPAAPRAVPAAAASAASDDDWETF
>Mature_616_residues
MLLKNLSIRTRLAVTMTLLSVLLCVVGALGLFGMSRANDANEQTSSNQLPSTIDVASAELFAARERLVLDRAALLAGTPD
AAPTIERARHMRGVSDSWWKKYLDLPRNGQEDRLAQDVAAKRQVLQRELDGFVELINANDRDRIIESAKRMQNVFNDFAL
ASEALRAFQLKQASVNFSDAQSVYGASRIASIAALVLGLAISLYCFLSLRAAIARPLADALGHFDAIAAGELRRPIVVAR
RDEMGLLLEGLAKMQASLADTVRSVRVGSESIATAARQIAAGNIDLSSRTEQQAAALEETASSMEELTGTVQRNADNARQ
ASALAASASEIANKGNAVVGQVVGTMGDINQSSAKIADIITIIEGIAFQTNILALNAAVEAARAGEEGRGFAVVAGEVRS
LAQRSSTAAKEIKELIDTSVERVRTGSSLVDDAGRTMSEVIGAVQRVTDIMGEIAAASDEQSTGIDQVSRAVSQMDEVTQ
QNAALVEEAAAAAQSLDEQAARLRETVSVFRVDDGDAREVAPRAPARPAAGVAHRAGRDAAPTQAAAPCGAAAAVAKGKA
PARPARCESAVKAESAASAPAPAAAPAAKPKPAPAAPRAVPAAAASAASDDDWETF

Specific function: Acts as a receptor for citrate and mediates taxis away from phenol. Also mediates an attractant response to metal-citrate complexes [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=545, Percent_Identity=44.5871559633028, Blast_Score=350, Evalue=1e-97,
Organism=Escherichia coli, GI1788195, Length=325, Percent_Identity=62.1538461538461, Blast_Score=350, Evalue=2e-97,
Organism=Escherichia coli, GI1788194, Length=337, Percent_Identity=54.8961424332344, Blast_Score=330, Evalue=1e-91,
Organism=Escherichia coli, GI1787690, Length=337, Percent_Identity=57.2700296735905, Blast_Score=330, Evalue=2e-91,
Organism=Escherichia coli, GI1789453, Length=327, Percent_Identity=38.8379204892966, Blast_Score=209, Evalue=3e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 64270; Mature: 64270

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLKNLSIRTRLAVTMTLLSVLLCVVGALGLFGMSRANDANEQTSSNQLPSTIDVASAEL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
FAARERLVLDRAALLAGTPDAAPTIERARHMRGVSDSWWKKYLDLPRNGQEDRLAQDVAA
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHH
KRQVLQRELDGFVELINANDRDRIIESAKRMQNVFNDFALASEALRAFQLKQASVNFSDA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
QSVYGASRIASIAALVLGLAISLYCFLSLRAAIARPLADALGHFDAIAAGELRRPIVVAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
RDEMGLLLEGLAKMQASLADTVRSVRVGSESIATAARQIAAGNIDLSSRTEQQAAALEET
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
ASSMEELTGTVQRNADNARQASALAASASEIANKGNAVVGQVVGTMGDINQSSAKIADII
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHH
TIIEGIAFQTNILALNAAVEAARAGEEGRGFAVVAGEVRSLAQRSSTAAKEIKELIDTSV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
ERVRTGSSLVDDAGRTMSEVIGAVQRVTDIMGEIAAASDEQSTGIDQVSRAVSQMDEVTQ
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
QNAALVEEAAAAAQSLDEQAARLRETVSVFRVDDGDAREVAPRAPARPAAGVAHRAGRDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHHHCCCCC
APTQAAAPCGAAAAVAKGKAPARPARCESAVKAESAASAPAPAAAPAAKPKPAPAAPRAV
CCCHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PAAAASAASDDDWETF
HHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLLKNLSIRTRLAVTMTLLSVLLCVVGALGLFGMSRANDANEQTSSNQLPSTIDVASAEL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
FAARERLVLDRAALLAGTPDAAPTIERARHMRGVSDSWWKKYLDLPRNGQEDRLAQDVAA
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHH
KRQVLQRELDGFVELINANDRDRIIESAKRMQNVFNDFALASEALRAFQLKQASVNFSDA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
QSVYGASRIASIAALVLGLAISLYCFLSLRAAIARPLADALGHFDAIAAGELRRPIVVAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
RDEMGLLLEGLAKMQASLADTVRSVRVGSESIATAARQIAAGNIDLSSRTEQQAAALEET
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
ASSMEELTGTVQRNADNARQASALAASASEIANKGNAVVGQVVGTMGDINQSSAKIADII
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHH
TIIEGIAFQTNILALNAAVEAARAGEEGRGFAVVAGEVRSLAQRSSTAAKEIKELIDTSV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
ERVRTGSSLVDDAGRTMSEVIGAVQRVTDIMGEIAAASDEQSTGIDQVSRAVSQMDEVTQ
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
QNAALVEEAAAAAQSLDEQAARLRETVSVFRVDDGDAREVAPRAPARPAAGVAHRAGRDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHHHCCCCC
APTQAAAPCGAAAAVAKGKAPARPARCESAVKAESAASAPAPAAAPAAKPKPAPAAPRAV
CCCHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PAAAASAASDDDWETF
HHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8419927; 11677609 [H]