| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83719300
Identifier: 83719300
GI number: 83719300
Start: 3664377
End: 3666041
Strand: Reverse
Name: 83719300
Synonym: BTH_I3218
Alternate gene names: NA
Gene position: 3666041-3664377 (Counterclockwise)
Preceding gene: 83720626
Following gene: 83719294
Centisome position: 96.24
GC content: 65.23
Gene sequence:
>1665_bases ATGTCCTACGTGCACGTCGACGGCGCCGATCCCCGTCATTCGACGCTTCAAAAGGGCTTCAACCTGCGCTGGCCGCCGAC CGCGGCAGCGGGCGCGGCGGCGATCTATGTCTGCCGCACGGCAGACGACGTGATCGCGGCGTCGCGCGACGCACTCGCGA AAGCTTGCCGGATCACGGTGCGCAGCGGCGGACACTGCTACGAAGGCTTCGTCGCGAACCGGCTGCCGGACGACGGCGGC CGGTCGCTCGCGATCGTGGATCTCGGGCTGATGTCGGGTTTCGACGTCGATTCGCGCGGGCAGATCGTGTCGCCGTTCGA CGTCGCCGGCTCGGCGCGCTATCGGGTTCGCGTCGCAGCGGGCAGCCAGAACTGGGACGGCTATGTCGGCCTGTACAAGA CTACGGGCAAGACGCTGCCCGGCGGCTCGTGCTACTCGGTCGGCGCGGGCGGTCATATCGTCGGTGGCGGGTACGGGCTG CTTTCGCGCATGCACGGGCTCACGGTCGACTGGCTGGCGGGCGTGGACATCCTGACGCCCGCATCCGGCGGCGGCGCGCT CGACGCGAAGCACGTGCATTCCGGCAGCACGGATCCGGCGGACCGGGCGCTTTTCGTCGCGTGTCGCGGCGGGGGCGGCG GCAACTTCGGCATCATCCTGAACTACTACTTCAATGCGCTGCCGGACGCGCCGCGCACCGCGTATTGGCTGCCGCTCGCG TACGACTGGTCGCACTTCACGCAGGCGAGCTTCGGCCAATTCATCCGAGCCTATTGGGACTGGTTCAGCCGCAACGATGC GAACTGGAACGCCGCGGATCCGGCGCTCGCGAACGGCGGGCTGTTTACGCTCCTGAAGCTGCAGCACCGCTCGACCGGGC CGGTCGTGCTAGCGATTCAGTACACGGGCAAAAACGGAACGGTGGGCGGCTCGGCGGATGCGCCGTTCATCGATTTCGTC GACACGATGAATGCGGCAGCGGGCCGGATGCCGATCATCTGGGATCGGTTCGTCGCGCCGAATCTGCCGGCGCTCGGGCA CCCGTTCGCCGGGCTGCGCATGGCGCATGCGGCGCAAAGCGCATTGAAGATGGACTGGCTGTATCTGACGCAGACGATCA ACGGATCGGGCGCTAACCGGCGCGGCAAGTATAAATCCGCGTATCAGATCGGCAATTTCGGCGACACCGAGATCGACGCG CTGTGGCGATATCTGAATACCGCGGACGATCCTCGTCTGAACCAGACGCTCGTGCAGATCGATTCGTACGGCGGCTGCGT GAACGCCAACGACGAAAGCGCGAATCCGACGTCGGTCTATCAGCGGCGTTCGCTGTTGAAATCGCAGTATCAGACTTACT GGACGAATCCCGATGACGACGCCTTCCACGTCGAATGGCTGCACGACATGTTTGCGGCGGTGCACGCGGATCAGGGCGGC AAACCATACAGTGATGCGAGCGGCCGCTACGAGGGGTGCTACATCAACTACCCGGACATCGACATGAAGTATCTCGAGCG CGATCCGGCGCAGATCGATCCGCGGTGGCTCGAACTGTACTACGGCGGCAAGGCCGCGTCGCTGGTCGCGACGAAGCAGG CGGTGGACCCGTCGAATATGTTCATGCACGAGATGTCGATTCCGCTGATGCTGCCCGGGGCCTGA
Upstream 100 bases:
>100_bases CGCGCCTCGAGTGGCGCGGCGATCGCGCGGTGCGTGATCCCCGGGTTGCGCGGCCATTCGCTCGGCTTTGACGCATGCGG CACATTCGCCGGAGGTTCCG
Downstream 100 bases:
>100_bases GCACCGGTAATCGAGGGCGGTCGATTCGAGCGTGTCGCAGATGCGTTTTGCGAAGCGCACAAGCGGCACGGTTCCGCATC GCGAGGGCTCGCATAAGCGA
Product: FAD-binding oxidoreductase
Products: NA
Alternate protein names: Secreted FAD-Linked Oxidase; Berberine/Berberine Domain Protein; Berberine/Berberine Domain-Containing Protein; Dehydrogenase; FAD Linked Oxidase Domain-Containing Protein; Hexose Oxidase; FAD/FMN-Dependent Dehydrogenase; FAD/FMN-Containing Dehydrogenase; Fad Linked Oxidase Oxidoreductase Protein
Number of amino acids: Translated: 554; Mature: 553
Protein sequence:
>554_residues MSYVHVDGADPRHSTLQKGFNLRWPPTAAAGAAAIYVCRTADDVIAASRDALAKACRITVRSGGHCYEGFVANRLPDDGG RSLAIVDLGLMSGFDVDSRGQIVSPFDVAGSARYRVRVAAGSQNWDGYVGLYKTTGKTLPGGSCYSVGAGGHIVGGGYGL LSRMHGLTVDWLAGVDILTPASGGGALDAKHVHSGSTDPADRALFVACRGGGGGNFGIILNYYFNALPDAPRTAYWLPLA YDWSHFTQASFGQFIRAYWDWFSRNDANWNAADPALANGGLFTLLKLQHRSTGPVVLAIQYTGKNGTVGGSADAPFIDFV DTMNAAAGRMPIIWDRFVAPNLPALGHPFAGLRMAHAAQSALKMDWLYLTQTINGSGANRRGKYKSAYQIGNFGDTEIDA LWRYLNTADDPRLNQTLVQIDSYGGCVNANDESANPTSVYQRRSLLKSQYQTYWTNPDDDAFHVEWLHDMFAAVHADQGG KPYSDASGRYEGCYINYPDIDMKYLERDPAQIDPRWLELYYGGKAASLVATKQAVDPSNMFMHEMSIPLMLPGA
Sequences:
>Translated_554_residues MSYVHVDGADPRHSTLQKGFNLRWPPTAAAGAAAIYVCRTADDVIAASRDALAKACRITVRSGGHCYEGFVANRLPDDGG RSLAIVDLGLMSGFDVDSRGQIVSPFDVAGSARYRVRVAAGSQNWDGYVGLYKTTGKTLPGGSCYSVGAGGHIVGGGYGL LSRMHGLTVDWLAGVDILTPASGGGALDAKHVHSGSTDPADRALFVACRGGGGGNFGIILNYYFNALPDAPRTAYWLPLA YDWSHFTQASFGQFIRAYWDWFSRNDANWNAADPALANGGLFTLLKLQHRSTGPVVLAIQYTGKNGTVGGSADAPFIDFV DTMNAAAGRMPIIWDRFVAPNLPALGHPFAGLRMAHAAQSALKMDWLYLTQTINGSGANRRGKYKSAYQIGNFGDTEIDA LWRYLNTADDPRLNQTLVQIDSYGGCVNANDESANPTSVYQRRSLLKSQYQTYWTNPDDDAFHVEWLHDMFAAVHADQGG KPYSDASGRYEGCYINYPDIDMKYLERDPAQIDPRWLELYYGGKAASLVATKQAVDPSNMFMHEMSIPLMLPGA >Mature_553_residues SYVHVDGADPRHSTLQKGFNLRWPPTAAAGAAAIYVCRTADDVIAASRDALAKACRITVRSGGHCYEGFVANRLPDDGGR SLAIVDLGLMSGFDVDSRGQIVSPFDVAGSARYRVRVAAGSQNWDGYVGLYKTTGKTLPGGSCYSVGAGGHIVGGGYGLL SRMHGLTVDWLAGVDILTPASGGGALDAKHVHSGSTDPADRALFVACRGGGGGNFGIILNYYFNALPDAPRTAYWLPLAY DWSHFTQASFGQFIRAYWDWFSRNDANWNAADPALANGGLFTLLKLQHRSTGPVVLAIQYTGKNGTVGGSADAPFIDFVD TMNAAAGRMPIIWDRFVAPNLPALGHPFAGLRMAHAAQSALKMDWLYLTQTINGSGANRRGKYKSAYQIGNFGDTEIDAL WRYLNTADDPRLNQTLVQIDSYGGCVNANDESANPTSVYQRRSLLKSQYQTYWTNPDDDAFHVEWLHDMFAAVHADQGGK PYSDASGRYEGCYINYPDIDMKYLERDPAQIDPRWLELYYGGKAASLVATKQAVDPSNMFMHEMSIPLMLPGA
Specific function: Unknown
COG id: COG0277
COG function: function code C; FAD/FMN-containing dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60026; Mature: 59895
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYVHVDGADPRHSTLQKGFNLRWPPTAAAGAAAIYVCRTADDVIAASRDALAKACRITV CCEEECCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHEEEE RSGGHCYEGFVANRLPDDGGRSLAIVDLGLMSGFDVDSRGQIVSPFDVAGSARYRVRVAA CCCCCEEECHHHCCCCCCCCCEEEEEEEEHHCCCCCCCCCCEECCCCCCCCCEEEEEEEE GSQNWDGYVGLYKTTGKTLPGGSCYSVGAGGHIVGGGYGLLSRMHGLTVDWLAGVDILTP CCCCCCCEEEEEEECCCCCCCCCEEEECCCCEEEECHHHHHHHHCCCEEHHHCCCEEECC ASGGGALDAKHVHSGSTDPADRALFVACRGGGGGNFGIILNYYFNALPDAPRTAYWLPLA CCCCCCCCHHHCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEHHHCCCCCCCCEEEEEEE YDWSHFTQASFGQFIRAYWDWFSRNDANWNAADPALANGGLFTLLKLQHRSTGPVVLAIQ ECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEE YTGKNGTVGGSADAPFIDFVDTMNAAAGRMPIIWDRFVAPNLPALGHPFAGLRMAHAAQS ECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEHHHCCCCCCCCCCCHHHHHHHHHHHH ALKMDWLYLTQTINGSGANRRGKYKSAYQIGNFGDTEIDALWRYLNTADDPRLNQTLVQI HHHHEEEEEEEEECCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCCCCEEEEE DSYGGCVNANDESANPTSVYQRRSLLKSQYQTYWTNPDDDAFHVEWLHDMFAAVHADQGG ECCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCCCC KPYSDASGRYEGCYINYPDIDMKYLERDPAQIDPRWLELYYGGKAASLVATKQAVDPSNM CCCCCCCCCCCCEEEECCCCCHHHHCCCCCCCCCEEEEEEECCCEEEEEEHHHCCCHHHH FMHEMSIPLMLPGA HHHHCCCCEECCCC >Mature Secondary Structure SYVHVDGADPRHSTLQKGFNLRWPPTAAAGAAAIYVCRTADDVIAASRDALAKACRITV CEEECCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHEEEE RSGGHCYEGFVANRLPDDGGRSLAIVDLGLMSGFDVDSRGQIVSPFDVAGSARYRVRVAA CCCCCEEECHHHCCCCCCCCCEEEEEEEEHHCCCCCCCCCCEECCCCCCCCCEEEEEEEE GSQNWDGYVGLYKTTGKTLPGGSCYSVGAGGHIVGGGYGLLSRMHGLTVDWLAGVDILTP CCCCCCCEEEEEEECCCCCCCCCEEEECCCCEEEECHHHHHHHHCCCEEHHHCCCEEECC ASGGGALDAKHVHSGSTDPADRALFVACRGGGGGNFGIILNYYFNALPDAPRTAYWLPLA CCCCCCCCHHHCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEHHHCCCCCCCCEEEEEEE YDWSHFTQASFGQFIRAYWDWFSRNDANWNAADPALANGGLFTLLKLQHRSTGPVVLAIQ ECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEE YTGKNGTVGGSADAPFIDFVDTMNAAAGRMPIIWDRFVAPNLPALGHPFAGLRMAHAAQS ECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEHHHCCCCCCCCCCCHHHHHHHHHHHH ALKMDWLYLTQTINGSGANRRGKYKSAYQIGNFGDTEIDALWRYLNTADDPRLNQTLVQI HHHHEEEEEEEEECCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCCCCEEEEE DSYGGCVNANDESANPTSVYQRRSLLKSQYQTYWTNPDDDAFHVEWLHDMFAAVHADQGG ECCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCCCC KPYSDASGRYEGCYINYPDIDMKYLERDPAQIDPRWLELYYGGKAASLVATKQAVDPSNM CCCCCCCCCCCCEEEECCCCCHHHHCCCCCCCCCEEEEEEECCCEEEEEEHHHCCCHHHH FMHEMSIPLMLPGA HHHHCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA