| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is mviN [H]
Identifier: 83719259
GI number: 83719259
Start: 845447
End: 847066
Strand: Direct
Name: mviN [H]
Synonym: BTH_I0736
Alternate gene names: 83719259
Gene position: 845447-847066 (Clockwise)
Preceding gene: 83721582
Following gene: 83718572
Centisome position: 22.19
GC content: 65.19
Gene sequence:
>1620_bases ATGCCGATATGCCGCTTTTGCTCGACCGGATCGGTTGCCGCCGCCCGAGGTCCGTATAATAAGCGCCCCATGAATCTATT CCGAGCCCTGCTGACGGTCAGCGGCTTCACGCTGCTGTCGCGCGTGACCGGACTGGCCCGTGAGACGCTGATCGCCCGTG CGTTCGGCGCCAGTCAATTCACAGACGCGTTCTACGTCGCATTCCGCATTCCGAACCTGCTGCGCCGGCTGTCCGCCGAA GGCGCGTTCTCGCAGGCGTTCGTGCCGATTCTCGCCGAGTTCAAGAATCAGAAAGGGCACGATGCAACGAAAGCGCTCGT CGACGCGATGTCGACCGTGCTCGCGTGGGCGCTCGCGTTCCTGTCGCTCGCCGGGATCGCCGGCGCGTCGTGGGTCGTGT TCGTCGTCGCATCGGGGCTGCGCACGGACGGGCAGGCATTTCCGCTCGCCGTCGCGATGACGCAGATCATGTTCCCGTAC ATCGTGTTCATTTCGCTGACGACGCTCGCGTCCGGCGTGCTCAACACGTACAAGAGCTTTTCGCTGCCGGCGTTCGCGCC CGTGCTGCTGAACGTCGCGTTCATCGCCGCCGCCGTGTTCGTCGCGCCGCATCTGAAGGTGCCCGTCTACGCGCTCGCCT GGGCGGTGATCGCGGGCGGCGTCCTGCAGTTCGCGGCGCAGTTGCCGGGCTTGAAGAAGATCGACATGGTGCCTTCGATC GGCGTGAATCCGATGCGCGCGCTCGCGCATCCGGGCGTAAAGCGCGTGCTCGCGAAGATGGTGCCCGCGACGTTCGCGGT GTCGGTCGCGCAGCTGTCGCTGATCATCAATACGAACATCGCGTCGCGGCTCGGGCAGGGCGCCGTGTCGTGGATCAATT ACGCGGACCGGCTGATGGAATTCCCGACCGCGCTCCTCGGCGTCGCGCTCGGCACGATCCTGCTGCCGAGCCTGTCGAAG GCGCACGTCGATGCCGATTCGACCGAGTATTCGGCGCTCCTCGACTGGGGGTTGCGGGTCACGTTCCTGCTGGCCGCGCC GAGCGCGCTCGCGCTCTTCTTCTTCGCCGAGCCGCTGACGGCGACGCTCTTCAACTACGGCAAGTTCGACGCGCATACGG TCACGATGGTCGCGCGCGCGCTCGCGACGTACGGAATCGGCCTCGTCGGCATCATCCTCATCAAGATCCTCGCGCCCGGC TTCTACGCGAAGCAAGACATCAAGACGCCCGTGAAGATCGCGGTCGGCGTGCTCGTCGTCACGCAGCTGTCGAACTACGT GTTCGTGCCGATCATCGGCCATGCGGGGCTCACGCTGAGCATCGGCGTCGGCGCGTGCCTGAACTCGCTGCTCCTGTTCA TTGGTTTGCGCCGCCGCGGCATCTACCAGCCGTCGCCCGGCTGGCTGCGCTTCTTCGTGCAGCTCGCGGGCGCGTCGCTC GTGCTCGCCGGCGTGATGCACTGGCTCGCGATCAACTTCGACTGGACCGCGATGCGCGCGGCGCCGCTCGATCGGATCGC GTTGATGGCCGCCTGCCTCGTTCTGTTCGCTGCACTATATTTCGGTATGTTGTGGCTGATGGGTTTCAAATACGCATACT TCAGACGGCGCGCCAAGTAA
Upstream 100 bases:
>100_bases AGAAAAAGCCGCGTCTGCCGGATCGTCGGCGGCGGGCACGCCTGTTCCGACATGCCGACGCCGGCGCACCCGTGAACGGT CGCCTCATGCCGGTACGCCG
Downstream 100 bases:
>100_bases CGGACCCCAATGACTCGCGTTCTCGACTATTTCAGTTCGCTCGTCGCCGAAGACGATGGCTTGCCGCTCACCGAGGCGGC GCTGTCGCTCGCGCAGGACG
Product: integral membrane protein MviN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 539; Mature: 538
Protein sequence:
>539_residues MPICRFCSTGSVAAARGPYNKRPMNLFRALLTVSGFTLLSRVTGLARETLIARAFGASQFTDAFYVAFRIPNLLRRLSAE GAFSQAFVPILAEFKNQKGHDATKALVDAMSTVLAWALAFLSLAGIAGASWVVFVVASGLRTDGQAFPLAVAMTQIMFPY IVFISLTTLASGVLNTYKSFSLPAFAPVLLNVAFIAAAVFVAPHLKVPVYALAWAVIAGGVLQFAAQLPGLKKIDMVPSI GVNPMRALAHPGVKRVLAKMVPATFAVSVAQLSLIINTNIASRLGQGAVSWINYADRLMEFPTALLGVALGTILLPSLSK AHVDADSTEYSALLDWGLRVTFLLAAPSALALFFFAEPLTATLFNYGKFDAHTVTMVARALATYGIGLVGIILIKILAPG FYAKQDIKTPVKIAVGVLVVTQLSNYVFVPIIGHAGLTLSIGVGACLNSLLLFIGLRRRGIYQPSPGWLRFFVQLAGASL VLAGVMHWLAINFDWTAMRAAPLDRIALMAACLVLFAALYFGMLWLMGFKYAYFRRRAK
Sequences:
>Translated_539_residues MPICRFCSTGSVAAARGPYNKRPMNLFRALLTVSGFTLLSRVTGLARETLIARAFGASQFTDAFYVAFRIPNLLRRLSAE GAFSQAFVPILAEFKNQKGHDATKALVDAMSTVLAWALAFLSLAGIAGASWVVFVVASGLRTDGQAFPLAVAMTQIMFPY IVFISLTTLASGVLNTYKSFSLPAFAPVLLNVAFIAAAVFVAPHLKVPVYALAWAVIAGGVLQFAAQLPGLKKIDMVPSI GVNPMRALAHPGVKRVLAKMVPATFAVSVAQLSLIINTNIASRLGQGAVSWINYADRLMEFPTALLGVALGTILLPSLSK AHVDADSTEYSALLDWGLRVTFLLAAPSALALFFFAEPLTATLFNYGKFDAHTVTMVARALATYGIGLVGIILIKILAPG FYAKQDIKTPVKIAVGVLVVTQLSNYVFVPIIGHAGLTLSIGVGACLNSLLLFIGLRRRGIYQPSPGWLRFFVQLAGASL VLAGVMHWLAINFDWTAMRAAPLDRIALMAACLVLFAALYFGMLWLMGFKYAYFRRRAK >Mature_538_residues PICRFCSTGSVAAARGPYNKRPMNLFRALLTVSGFTLLSRVTGLARETLIARAFGASQFTDAFYVAFRIPNLLRRLSAEG AFSQAFVPILAEFKNQKGHDATKALVDAMSTVLAWALAFLSLAGIAGASWVVFVVASGLRTDGQAFPLAVAMTQIMFPYI VFISLTTLASGVLNTYKSFSLPAFAPVLLNVAFIAAAVFVAPHLKVPVYALAWAVIAGGVLQFAAQLPGLKKIDMVPSIG VNPMRALAHPGVKRVLAKMVPATFAVSVAQLSLIINTNIASRLGQGAVSWINYADRLMEFPTALLGVALGTILLPSLSKA HVDADSTEYSALLDWGLRVTFLLAAPSALALFFFAEPLTATLFNYGKFDAHTVTMVARALATYGIGLVGIILIKILAPGF YAKQDIKTPVKIAVGVLVVTQLSNYVFVPIIGHAGLTLSIGVGACLNSLLLFIGLRRRGIYQPSPGWLRFFVQLAGASLV LAGVMHWLAINFDWTAMRAAPLDRIALMAACLVLFAALYFGMLWLMGFKYAYFRRRAK
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=515, Percent_Identity=52.4271844660194, Blast_Score=494, Evalue=1e-141,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 57895; Mature: 57763
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: PS00962 RIBOSOMAL_S2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPICRFCSTGSVAAARGPYNKRPMNLFRALLTVSGFTLLSRVTGLARETLIARAFGASQF CCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH TDAFYVAFRIPNLLRRLSAEGAFSQAFVPILAEFKNQKGHDATKALVDAMSTVLAWALAF HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH LSLAGIAGASWVVFVVASGLRTDGQAFPLAVAMTQIMFPYIVFISLTTLASGVLNTYKSF HHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SLPAFAPVLLNVAFIAAAVFVAPHLKVPVYALAWAVIAGGVLQFAAQLPGLKKIDMVPSI CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCC GVNPMRALAHPGVKRVLAKMVPATFAVSVAQLSLIINTNIASRLGQGAVSWINYADRLME CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHH FPTALLGVALGTILLPSLSKAHVDADSTEYSALLDWGLRVTFLLAAPSALALFFFAEPLT HHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH ATLFNYGKFDAHTVTMVARALATYGIGLVGIILIKILAPGFYAKQDIKTPVKIAVGVLVV HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHH TQLSNYVFVPIIGHAGLTLSIGVGACLNSLLLFIGLRRRGIYQPSPGWLRFFVQLAGASL HHHCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH VLAGVMHWLAINFDWTAMRAAPLDRIALMAACLVLFAALYFGMLWLMGFKYAYFRRRAK HHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PICRFCSTGSVAAARGPYNKRPMNLFRALLTVSGFTLLSRVTGLARETLIARAFGASQF CCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH TDAFYVAFRIPNLLRRLSAEGAFSQAFVPILAEFKNQKGHDATKALVDAMSTVLAWALAF HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH LSLAGIAGASWVVFVVASGLRTDGQAFPLAVAMTQIMFPYIVFISLTTLASGVLNTYKSF HHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SLPAFAPVLLNVAFIAAAVFVAPHLKVPVYALAWAVIAGGVLQFAAQLPGLKKIDMVPSI CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCC GVNPMRALAHPGVKRVLAKMVPATFAVSVAQLSLIINTNIASRLGQGAVSWINYADRLME CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHH FPTALLGVALGTILLPSLSKAHVDADSTEYSALLDWGLRVTFLLAAPSALALFFFAEPLT HHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH ATLFNYGKFDAHTVTMVARALATYGIGLVGIILIKILAPGFYAKQDIKTPVKIAVGVLVV HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHH TQLSNYVFVPIIGHAGLTLSIGVGACLNSLLLFIGLRRRGIYQPSPGWLRFFVQLAGASL HHHCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH VLAGVMHWLAINFDWTAMRAAPLDRIALMAACLVLFAALYFGMLWLMGFKYAYFRRRAK HHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8200538; 11677609 [H]