| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is glnH [H]
Identifier: 83719161
GI number: 83719161
Start: 2804788
End: 2805603
Strand: Reverse
Name: glnH [H]
Synonym: BTH_I2450
Alternate gene names: 83719161
Gene position: 2805603-2804788 (Counterclockwise)
Preceding gene: 83720042
Following gene: 83719898
Centisome position: 73.65
GC content: 65.2
Gene sequence:
>816_bases ATGAAATTCAAGCCATTCGCTGCCTGGCTCATCGGTTTGTCGCTCGCCGCCGCGCATGCGGCCGCGCACGCGGACCGGCT CGACGACATCAAGAAGGCCGGCGTGCTGCGCGTCGCGACGTTCGACAGCAACCCGCCGTTCGGCTTCGTCGACCCGAAGA CGAACCGGATCGTCGGTCTCGACGTCGACTACGCGCGGGCGCTTGCCGACAAGCTCGGCGTCAAGCTGAAGCTGCAACCG ACCAATCCCGCGAACCGCATCCCGTTCCTGACGTCGGGCAAGGTCGATCTCGTGCTCGCGAACTTCACGATCACCGGCGA ACGCGCGAAGCAGGTCGACTTCAGCATTCCGTATTTCGCATCCGGCCAGCAGTTCCTCGCGAAAAAAGGCGTGCTGAAGT CGGCCGATCAACTGAACCGCCTGCGCATCGGCGCGGACAAGGGCACGACGAACGAAGTCACGCTGCGCGAGAAATATCCG CAGGCGACGATCGTCGCGTACGACGACACGCCGTTCGCGTTCGCCGCGCTGCGCGCGGGCAACGTGCAGGCGATCACGCA GGACGGGCCGAAGCTGATCGGCCTGCTCGCGAACGTGCCGGACAAGCAGAATTACGAAGTGCCGGCGTTTTCGATCTCGA ACGATTACATGGGCGTCGGCGCGCCGAAGGGCGAGACGCGGCTCGTCGCGTTCGTCAACGACACGCTGGCGGAGCTCGAG GCGAACGGCCGCGCGGGCCGGATCTACGACGCATGGTTCGGGCCGAACACGAGGACGCCGCTCGCGCGGATCTTCAGGAT CGGCGACAAACGCTGA
Upstream 100 bases:
>100_bases TGCGCTGATACGGTGACGGACTCGCGGCGCATCGCGCGCCGCGTCGCTCATCGGCCGGACGCACCGCGCCGGCGTCACCC GGAACAAGAGAAACGCGCCA
Downstream 100 bases:
>100_bases ACCGCGCGCCGAACCGCGCACCGCATGCGGCGCGCATTCACGCTTGACGCAAGCAGGTGCGCGCGATCGCCGCGACACGC CTCGACGCGCAATCCCGCGC
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MKFKPFAAWLIGLSLAAAHAAAHADRLDDIKKAGVLRVATFDSNPPFGFVDPKTNRIVGLDVDYARALADKLGVKLKLQP TNPANRIPFLTSGKVDLVLANFTITGERAKQVDFSIPYFASGQQFLAKKGVLKSADQLNRLRIGADKGTTNEVTLREKYP QATIVAYDDTPFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEVPAFSISNDYMGVGAPKGETRLVAFVNDTLAELE ANGRAGRIYDAWFGPNTRTPLARIFRIGDKR
Sequences:
>Translated_271_residues MKFKPFAAWLIGLSLAAAHAAAHADRLDDIKKAGVLRVATFDSNPPFGFVDPKTNRIVGLDVDYARALADKLGVKLKLQP TNPANRIPFLTSGKVDLVLANFTITGERAKQVDFSIPYFASGQQFLAKKGVLKSADQLNRLRIGADKGTTNEVTLREKYP QATIVAYDDTPFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEVPAFSISNDYMGVGAPKGETRLVAFVNDTLAELE ANGRAGRIYDAWFGPNTRTPLARIFRIGDKR >Mature_271_residues MKFKPFAAWLIGLSLAAAHAAAHADRLDDIKKAGVLRVATFDSNPPFGFVDPKTNRIVGLDVDYARALADKLGVKLKLQP TNPANRIPFLTSGKVDLVLANFTITGERAKQVDFSIPYFASGQQFLAKKGVLKSADQLNRLRIGADKGTTNEVTLREKYP QATIVAYDDTPFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEVPAFSISNDYMGVGAPKGETRLVAFVNDTLAELE ANGRAGRIYDAWFGPNTRTPLARIFRIGDKR
Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788228, Length=233, Percent_Identity=34.3347639484979, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI1787088, Length=263, Percent_Identity=30.4182509505703, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1786876, Length=239, Percent_Identity=30.5439330543933, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1787085, Length=219, Percent_Identity=29.2237442922374, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1787031, Length=252, Percent_Identity=30.952380952381, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1788649, Length=256, Percent_Identity=25.78125, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI1788648, Length=228, Percent_Identity=23.6842105263158, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 29478; Mature: 29478
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKPFAAWLIGLSLAAAHAAAHADRLDDIKKAGVLRVATFDSNPPFGFVDPKTNRIVGL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEECCCCCEEEEE DVDYARALADKLGVKLKLQPTNPANRIPFLTSGKVDLVLANFTITGERAKQVDFSIPYFA CHHHHHHHHHHHCEEEEEECCCCCCCCCEEECCCEEEEEEEEEEECCCCCEEEECCCCCC SGQQFLAKKGVLKSADQLNRLRIGADKGTTNEVTLREKYPQATIVAYDDTPFAFAALRAG CCHHHHHHHCHHHCHHHHHHEEEECCCCCCCEEEEHCCCCCEEEEEECCCCEEEEEEECC NVQAITQDGPKLIGLLANVPDKQNYEVPAFSISNDYMGVGAPKGETRLVAFVNDTLAELE CEEEEECCCCEEEHHHHCCCCCCCCCCCEEEECCCEEECCCCCCCEEEEEEECHHHHHHH ANGRAGRIYDAWFGPNTRTPLARIFRIGDKR CCCCCCEEEEEECCCCCCCHHHHHHHCCCCC >Mature Secondary Structure MKFKPFAAWLIGLSLAAAHAAAHADRLDDIKKAGVLRVATFDSNPPFGFVDPKTNRIVGL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEECCCCCEEEEE DVDYARALADKLGVKLKLQPTNPANRIPFLTSGKVDLVLANFTITGERAKQVDFSIPYFA CHHHHHHHHHHHCEEEEEECCCCCCCCCEEECCCEEEEEEEEEEECCCCCEEEECCCCCC SGQQFLAKKGVLKSADQLNRLRIGADKGTTNEVTLREKYPQATIVAYDDTPFAFAALRAG CCHHHHHHHCHHHCHHHHHHEEEECCCCCCCEEEEHCCCCCEEEEEECCCCEEEEEEECC NVQAITQDGPKLIGLLANVPDKQNYEVPAFSISNDYMGVGAPKGETRLVAFVNDTLAELE CEEEEECCCCEEEHHHHCCCCCCCCCCCEEEECCCEEECCCCCCCEEEEEEECHHHHHHH ANGRAGRIYDAWFGPNTRTPLARIFRIGDKR CCCCCCEEEEEECCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7551042; 9384377 [H]