| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83719144
Identifier: 83719144
GI number: 83719144
Start: 1054495
End: 1055205
Strand: Direct
Name: 83719144
Synonym: BTH_I0933
Alternate gene names: NA
Gene position: 1054495-1055205 (Clockwise)
Preceding gene: 83719908
Following gene: 83721192
Centisome position: 27.68
GC content: 55.56
Gene sequence:
>711_bases ATGCTCGCGAACGTTCGGCCGACACTGGCATCGCTCGCCATCGCAATCGCTATCGGCGCGCCCAGTTTGACGGCGCGCGC GCAAGCCACAATCGACGCTTATTCGTTTGTCGGCTCGCCTATCATCAAATCGGTGCATTCGATGCGCGAGATCCGTTATC GCGACGTCGTGAGTCAGCAGTTCGATTTCAGTTGCGGATCGGCTGCGCTCTCGACGCTTCTCAAATACGGATATGGCATC GATATTCCGGAAACCGAAATGATTCGGAGAATGATGGCATTTTCCGAACCGGAAGTCGTCGTCAAGCATGGCTTCTCGAT GCTCGACATGAAGAAATTCGTCGAGACGCTCGGCTTGCGTGGACGCGGTTTTCGCGTCGGCATCGAGGCACTTTACAGAT TGCGGATTCCCGTGCTCGTGCTGATGAACATCGACGGCTACGAGCACTTCGTCATTGTCAAGCATGCCGAGAACGGACGG ATCTTTCTTGCCGACCCCGCGCTCGGCAATCGCATCGTGCTCGAGCGGGATTTTTTGAAGAGCTGGAACGGTCTCGTCTT CGCCGTGCTAGGCAAACCATTCAGGGAGGATTCTCCTCTGTTGCAGCATAACGAATCGCTTGCCCTCAAGCTCCGTGAGC AAGCGCTCAATACGGGCACGGCTGCGATTCCCTTCGTCGAATTCGGCTTGATCAAGGCAGATCTTTTCTGA
Upstream 100 bases:
>100_bases CGGGCTCGCGATCGCCGCGCTCAACAGCGGCCATTGAAGCATCGGGAGAATGCGCGTCGCGCCGCCGTGCCTGCGGCGCG ACGCGCACCGGGAGACCAGC
Downstream 100 bases:
>100_bases CTCGTCATGAAACGTTTTTTCTCGACGTCTACTTTCGCATGGTGTGCCGCGACGTATTGCATCGCCAGTAGCGCCTTTGC GGCCGGGAACATGCCCGCAT
Product: C39 family peptidase
Products: NA
Alternate protein names: Double-Glycine Peptidase; C39 Family Peptidase; Periplasmic Protein; Bacteriocin Processing Protein Peptidase; Peptidase Protein; Cysteine Peptidase Family C; Periplasmic
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MLANVRPTLASLAIAIAIGAPSLTARAQATIDAYSFVGSPIIKSVHSMREIRYRDVVSQQFDFSCGSAALSTLLKYGYGI DIPETEMIRRMMAFSEPEVVVKHGFSMLDMKKFVETLGLRGRGFRVGIEALYRLRIPVLVLMNIDGYEHFVIVKHAENGR IFLADPALGNRIVLERDFLKSWNGLVFAVLGKPFREDSPLLQHNESLALKLREQALNTGTAAIPFVEFGLIKADLF
Sequences:
>Translated_236_residues MLANVRPTLASLAIAIAIGAPSLTARAQATIDAYSFVGSPIIKSVHSMREIRYRDVVSQQFDFSCGSAALSTLLKYGYGI DIPETEMIRRMMAFSEPEVVVKHGFSMLDMKKFVETLGLRGRGFRVGIEALYRLRIPVLVLMNIDGYEHFVIVKHAENGR IFLADPALGNRIVLERDFLKSWNGLVFAVLGKPFREDSPLLQHNESLALKLREQALNTGTAAIPFVEFGLIKADLF >Mature_236_residues MLANVRPTLASLAIAIAIGAPSLTARAQATIDAYSFVGSPIIKSVHSMREIRYRDVVSQQFDFSCGSAALSTLLKYGYGI DIPETEMIRRMMAFSEPEVVVKHGFSMLDMKKFVETLGLRGRGFRVGIEALYRLRIPVLVLMNIDGYEHFVIVKHAENGR IFLADPALGNRIVLERDFLKSWNGLVFAVLGKPFREDSPLLQHNESLALKLREQALNTGTAAIPFVEFGLIKADLF
Specific function: Unknown
COG id: COG3271
COG function: function code R; Predicted double-glycine peptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26245; Mature: 26245
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: PS50990 PEPTIDASE_C39
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLANVRPTLASLAIAIAIGAPSLTARAQATIDAYSFVGSPIIKSVHSMREIRYRDVVSQQ CCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH FDFSCGSAALSTLLKYGYGIDIPETEMIRRMMAFSEPEVVVKHGFSMLDMKKFVETLGLR CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHCCC GRGFRVGIEALYRLRIPVLVLMNIDGYEHFVIVKHAENGRIFLADPALGNRIVLERDFLK CCCCHHHHHHHHHHCCCEEEEEECCCCEEEEEEEECCCCEEEEECCCCCCEEEEEHHHHH SWNGLVFAVLGKPFREDSPLLQHNESLALKLREQALNTGTAAIPFVEFGLIKADLF CCCCEEEEEECCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHEEECCC >Mature Secondary Structure MLANVRPTLASLAIAIAIGAPSLTARAQATIDAYSFVGSPIIKSVHSMREIRYRDVVSQQ CCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH FDFSCGSAALSTLLKYGYGIDIPETEMIRRMMAFSEPEVVVKHGFSMLDMKKFVETLGLR CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHCCC GRGFRVGIEALYRLRIPVLVLMNIDGYEHFVIVKHAENGRIFLADPALGNRIVLERDFLK CCCCHHHHHHHHHHCCCEEEEEECCCCEEEEEEEECCCCEEEEECCCCCCEEEEEHHHHH SWNGLVFAVLGKPFREDSPLLQHNESLALKLREQALNTGTAAIPFVEFGLIKADLF CCCCEEEEEECCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA