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The map label for this gene is regB [H]

Identifier: 83719135

GI number: 83719135

Start: 193123

End: 194403

Strand: Direct

Name: regB [H]

Synonym: BTH_I0162

Alternate gene names: 83719135

Gene position: 193123-194403 (Clockwise)

Preceding gene: 83720115

Following gene: 83718683

Centisome position: 5.07

GC content: 68.77

Gene sequence:

>1281_bases
ATGCAACGAATCACCACTACCGGACGCGTCAACCTGAGCCATCTGTTCTGGTTGCGCAATCTTGCGATCATCGGCCAACT
CGTCACGATCGCCGTCGTACAGACCTATTTCGGCGTCCATTTGCCATTGCCGGCGATGCTGATGGTGATCGCGCTCGAAA
TCGTGTTCAACGCGCTCACGTGGGTGCGCGTGCTGCGCGCGCGGCCCGAGACCAACTTCGAGCTGCTCGGCCAGCTATGG
GTCGACCTGGGCGCGCTGTCGGCGCTTCTGTTCCTGTCGGGCGGGACGACGAACCCGTTCGTTTCGCTGTATTTGCCGTC
GCTCGCGATCGCGGCCGCGGTGCTGCCGTGGCACCTGATGATCTGGCTCGCGGCGTTCGCGGTCGCGTGCTACCTCGCGC
TCGGCTTCGATTCGGTGCCGCTCAATCTGGATAACCCCGCGAATCTGTTCGATTATTTTCGTGCGGGCATGTGGGTGAAC
TTCATGGTGAGCGTCGGGCTCATCGCGTGGTTCGTCGCGCGGATGTCGAGCGCGCTGCGCCAGCGCGACGCGGCGCTCGG
CGAGGCGCAGCAGGCGCTGTTGCGCGACGAGCGCGCGGTCGCGCTCGGCGTGCAGGCGGCCACCGTCGCGCACGAGATGG
GCACGCCGCTGTCGACGATCGCGATGCTGACCGAGGAATTGCGCGAGGCCGCCCGCACGGATGCGGGGCTCGCGCGCTAC
GATGCGGACCTGAAGGTGCTCGAGGAGCAGATGTCGCAGTGCACGTCGGCGCTCGCGCGCCTGAGAAGCCGCGCATCGGA
GCGGCCGAGCCGCGAGCCCGTCGGCGAGTGGCTCGACACGTTCGTCGAGCATTGGAGGCTGCGCCATCCGCACGTGCTGT
TCGAGCAGTTGGGGCCGCGGCCCGCGGGCGTCGCCCTCGACGATACGGTCGCGGTCGGCCAGATCCTGACCATCCTGCTC
GACAATGCCGCGCGCGCGAGCCGCGATCGCGTTACGCTGGCGGCAACGATCGCGCACGACGGCGCACGCGACGAAATCGA
GTTCGAAGTCTGCGACAACGGGCCGGGCATCCCGGCCGCGTTGCGCGACACGCTCGGCGCGGCGCCCGTCGACAGCACGC
AGGGCGGCCACGGGGTGGGCCTGTACCTGGCGTTCAGCGCGGCGGCGCGCCTGGGCGGCTCGATCGAGCTCGCCGATGCG
CAGCCGCGCGGCACGCGGGTGATCCTGCGGCTGCCGGTCGCACGCCAGGTGGCGGCCGAGATGGCGAACGAAAACGGATA
G

Upstream 100 bases:

>100_bases
TTGCCGACGAGATCGCCCGGCGCATCGCCGCCGGCGCCGTAGGCGCGGGGGCGGGTGCGGATCGACCCAAGCGCGAAGAC
TGAGAAGGTAAACTGCGCGG

Downstream 100 bases:

>100_bases
ACCAGATGGAGTGATGCAAATGAGCGACAAGAATTTCCTCGTGATCGACGACAACGAAGTGTTTGCCGGCACACTGGCGC
GCGGGCTCGAGCGCCGCGGC

Product: sensor histidine kinase

Products: NA

Alternate protein names: Protein prrB [H]

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MQRITTTGRVNLSHLFWLRNLAIIGQLVTIAVVQTYFGVHLPLPAMLMVIALEIVFNALTWVRVLRARPETNFELLGQLW
VDLGALSALLFLSGGTTNPFVSLYLPSLAIAAAVLPWHLMIWLAAFAVACYLALGFDSVPLNLDNPANLFDYFRAGMWVN
FMVSVGLIAWFVARMSSALRQRDAALGEAQQALLRDERAVALGVQAATVAHEMGTPLSTIAMLTEELREAARTDAGLARY
DADLKVLEEQMSQCTSALARLRSRASERPSREPVGEWLDTFVEHWRLRHPHVLFEQLGPRPAGVALDDTVAVGQILTILL
DNAARASRDRVTLAATIAHDGARDEIEFEVCDNGPGIPAALRDTLGAAPVDSTQGGHGVGLYLAFSAAARLGGSIELADA
QPRGTRVILRLPVARQVAAEMANENG

Sequences:

>Translated_426_residues
MQRITTTGRVNLSHLFWLRNLAIIGQLVTIAVVQTYFGVHLPLPAMLMVIALEIVFNALTWVRVLRARPETNFELLGQLW
VDLGALSALLFLSGGTTNPFVSLYLPSLAIAAAVLPWHLMIWLAAFAVACYLALGFDSVPLNLDNPANLFDYFRAGMWVN
FMVSVGLIAWFVARMSSALRQRDAALGEAQQALLRDERAVALGVQAATVAHEMGTPLSTIAMLTEELREAARTDAGLARY
DADLKVLEEQMSQCTSALARLRSRASERPSREPVGEWLDTFVEHWRLRHPHVLFEQLGPRPAGVALDDTVAVGQILTILL
DNAARASRDRVTLAATIAHDGARDEIEFEVCDNGPGIPAALRDTLGAAPVDSTQGGHGVGLYLAFSAAARLGGSIELADA
QPRGTRVILRLPVARQVAAEMANENG
>Mature_426_residues
MQRITTTGRVNLSHLFWLRNLAIIGQLVTIAVVQTYFGVHLPLPAMLMVIALEIVFNALTWVRVLRARPETNFELLGQLW
VDLGALSALLFLSGGTTNPFVSLYLPSLAIAAAVLPWHLMIWLAAFAVACYLALGFDSVPLNLDNPANLFDYFRAGMWVN
FMVSVGLIAWFVARMSSALRQRDAALGEAQQALLRDERAVALGVQAATVAHEMGTPLSTIAMLTEELREAARTDAGLARY
DADLKVLEEQMSQCTSALARLRSRASERPSREPVGEWLDTFVEHWRLRHPHVLFEQLGPRPAGVALDDTVAVGQILTILL
DNAARASRDRVTLAATIAHDGARDEIEFEVCDNGPGIPAALRDTLGAAPVDSTQGGHGVGLYLAFSAAARLGGSIELADA
QPRGTRVILRLPVARQVAAEMANENG

Specific function: Member of the two-component regulatory system RegB/RegA. Involved in the positive regulation of photosynthesis gene expression in response to anaerobiosis. Also involved in positive regulation of the cbbI and cbbII Calvin cycle CO2 fixation operons, as we

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 46227; Mature: 46227

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCC
>Mature Secondary Structure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HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7751278; 10358089 [H]