Definition Burkholderia thailandensis E264 chromosome chromosome I, complete sequence.
Accession NC_007651
Length 3,809,201

Click here to switch to the map view.

The map label for this gene is yedY [H]

Identifier: 83719124

GI number: 83719124

Start: 3257770

End: 3258561

Strand: Reverse

Name: yedY [H]

Synonym: BTH_I2840

Alternate gene names: 83719124

Gene position: 3258561-3257770 (Counterclockwise)

Preceding gene: 83719998

Following gene: 83719054

Centisome position: 85.54

GC content: 65.66

Gene sequence:

>792_bases
ATGTCTGAAAACGACGGAAAAAAGCCCAAAGGCGACATTGCGCGGATCGACCGCGCGTCGCTCTTGATCGACGTGCGCAA
GGCGCTCGCGCTGCCGTCGCGACGCCTGTTCGGCAAGCGCGTGCTCACGCTCGGCGGCCTCGCGATGCTCACGGGCTGCA
CGCTGCGCGACGACGCGTCGGTCGACGATTTCCTCGAGAAGGTGTCGCGCGCGAACGATCGCGTGCAGGCGTGGCTGTTC
GGGCCGACGCGGCTCGCGCCGACGTATGCGGAAAGCGACATCACGCGCCCGTTCCCGTTCAACGCGTTCTACGGCATCGA
CGACGTGCCGCGCGTCGACGTCGGCGACTTTCGGCTCGCCGTGTCGGGGCTCGTCACCGGCAAGCGCAACTGGACGCTGC
CGGAGCTGTACGCGCTGCCGCATGCGCAGCAGATCACGCGGCATATCTGCGTCGAGGGCTGGAGCGCGATCGGCCGCTGG
GGCGGCACGCCGTTTCGCGAATTCCTGCGCCGCGCCGGCGCGGACACGACCGCGAAGTACGTCGGCTTCAAATGCGCGGA
CGACTATTACGAGAGCATCGACATGCCGAGCGCGCTGCACCCGCAGACGCTGCTCGCGTTCGAATACGACGGCAGGCGGC
TGCCGCCCGAATACGGATTTCCGATGAAGCTGCGCATGCCGACGAAGCTCGGCTACAAGAATCCGAAGCACATCATGGAG
ATATTCGTGACCAACACGTATCCGGGCGGATATTGGGTCGACCAGGGGTACAACTGGTTCGGCGGTTCGTGA

Upstream 100 bases:

>100_bases
GTTTCTCGTCGCGTTCTTCGTCGTGCATGTCGCGATGGCGGCGCTCGTGCCGCGCTCGCTGTTCGCGATGCTGCGCGGTC
ATTGAAAGGAGCTGTGCATC

Downstream 100 bases:

>100_bases
CGCGATCGCGCGCGCTTCGCGCGTGCGGTGCGCCGCCGCTCGTGCGTGCGTGTCTGCGCGCGCGCTTCGCGCGTTCTTGC
AACCGGCCGTCGTGCCGTCA

Product: molybdopterin-binding oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MSENDGKKPKGDIARIDRASLLIDVRKALALPSRRLFGKRVLTLGGLAMLTGCTLRDDASVDDFLEKVSRANDRVQAWLF
GPTRLAPTYAESDITRPFPFNAFYGIDDVPRVDVGDFRLAVSGLVTGKRNWTLPELYALPHAQQITRHICVEGWSAIGRW
GGTPFREFLRRAGADTTAKYVGFKCADDYYESIDMPSALHPQTLLAFEYDGRRLPPEYGFPMKLRMPTKLGYKNPKHIME
IFVTNTYPGGYWVDQGYNWFGGS

Sequences:

>Translated_263_residues
MSENDGKKPKGDIARIDRASLLIDVRKALALPSRRLFGKRVLTLGGLAMLTGCTLRDDASVDDFLEKVSRANDRVQAWLF
GPTRLAPTYAESDITRPFPFNAFYGIDDVPRVDVGDFRLAVSGLVTGKRNWTLPELYALPHAQQITRHICVEGWSAIGRW
GGTPFREFLRRAGADTTAKYVGFKCADDYYESIDMPSALHPQTLLAFEYDGRRLPPEYGFPMKLRMPTKLGYKNPKHIME
IFVTNTYPGGYWVDQGYNWFGGS
>Mature_262_residues
SENDGKKPKGDIARIDRASLLIDVRKALALPSRRLFGKRVLTLGGLAMLTGCTLRDDASVDDFLEKVSRANDRVQAWLFG
PTRLAPTYAESDITRPFPFNAFYGIDDVPRVDVGDFRLAVSGLVTGKRNWTLPELYALPHAQQITRHICVEGWSAIGRWG
GTPFREFLRRAGADTTAKYVGFKCADDYYESIDMPSALHPQTLLAFEYDGRRLPPEYGFPMKLRMPTKLGYKNPKHIMEI
FVTNTYPGGYWVDQGYNWFGGS

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=181, Percent_Identity=29.8342541436464, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 29638; Mature: 29507

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENDGKKPKGDIARIDRASLLIDVRKALALPSRRLFGKRVLTLGGLAMLTGCTLRDDAS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCC
VDDFLEKVSRANDRVQAWLFGPTRLAPTYAESDITRPFPFNAFYGIDDVPRVDVGDFRLA
HHHHHHHHHCCCCCEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEE
VSGLVTGKRNWTLPELYALPHAQQITRHICVEGWSAIGRWGGTPFREFLRRAGADTTAKY
EHHHEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHH
VGFKCADDYYESIDMPSALHPQTLLAFEYDGRRLPPEYGFPMKLRMPTKLGYKNPKHIME
HCEEEHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCHHCCCCCHHHEEE
IFVTNTYPGGYWVDQGYNWFGGS
EEEECCCCCCEEECCCCCCCCCC
>Mature Secondary Structure 
SENDGKKPKGDIARIDRASLLIDVRKALALPSRRLFGKRVLTLGGLAMLTGCTLRDDAS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCC
VDDFLEKVSRANDRVQAWLFGPTRLAPTYAESDITRPFPFNAFYGIDDVPRVDVGDFRLA
HHHHHHHHHCCCCCEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEE
VSGLVTGKRNWTLPELYALPHAQQITRHICVEGWSAIGRWGGTPFREFLRRAGADTTAKY
EHHHEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHH
VGFKCADDYYESIDMPSALHPQTLLAFEYDGRRLPPEYGFPMKLRMPTKLGYKNPKHIME
HCEEEHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCHHCCCCCHHHEEE
IFVTNTYPGGYWVDQGYNWFGGS
EEEECCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14500908 [H]