| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83719118
Identifier: 83719118
GI number: 83719118
Start: 1306338
End: 1307678
Strand: Reverse
Name: 83719118
Synonym: BTH_I1160
Alternate gene names: NA
Gene position: 1307678-1306338 (Counterclockwise)
Preceding gene: 83719303
Following gene: 83721283
Centisome position: 34.33
GC content: 72.41
Gene sequence:
>1341_bases ATGCTCCTCGCGACGCGCTGCCCTCACTGTGAAACCGTCTTCCGCCTGCAACGGGAACAGCTTGCGCTGCACGACGGTCT CGTGCGCTGCGGCCATTGCCGGCAAGTGTTCGACGCGGCGCGCGCGCTCGTGCCCGCCGAACCGGAAGCGGCCGCTGCGC AAGCAGCGCCGCATGCGCCGGAGCAGCAGCCGGCGCCGCCCCGGCGCCTGTTCGACGCGACCTCTCCCGATCGCCGTCCG CTCGAAGCCGGTCATCGCGATTTCGCACCGGGCGCCTGGGACATGTGGGCGCCCTGGCTCGACGGCGCGGTCGATCCGAA ACTGCAGATGACGAGCACGAGCGTCAGCACCGCCTCCGACGGCGCGGTCGCGACATCCGCCGCCGCGGACGAAGCGCGCA ACGCCGAATCCGATGCGCCCACGCAGCAAGCGCGCAAAGCGTCCGATACGCAAGCCGCACTTGCGCCTCGGCCCGGCGAG CGCACGACACACGCGTCGCCCGAAACCGGCACCGGTGCGCACGCCGCCCGAACGTCCGAAGCCGATCCGCCCGCCGCCGG CGCGCGTGAATTTCCTCCGCCGCCGCCCCCGACGCTCGATCTCGATCGAAGCGCCACCGCGAAGCGCGAGCCCGACGCCG CGCGCGCGTCCGCCCCGCCGCCCCGCGACGCGGTCGAACCCGTGCTCGCATCGCCCGCGGACGCAGCAGCGGCGCTTGAC CGCGCCCTCCATGATCACGAGCCGCACTTCGGCGCGGCGGCGCCGTCCCGAGCGAGCGCCGAACCGTTCGCCGCGGCGCC CGACGCCGACAACCGAGAGCATTTCGCGATGACCCGCGAAACGCGGACGAACGCCGCACGCGGCGGCTTCGCGCGCGCGC TCGGCGTGAGCATCGCATTCGCGCTCGCTGCGCTGCTCGCCGCGCAGCTTGCGTGGTGGCAGCGCGAAACGATCACGATC TACTGGCCGTCGACCGAGCCGCTCTTCAAGCAGGCGTGCGCGACGCTCGGCTGCACGGTCACGCCGCCGCGCGCGATCGA CGGCCTGCGGCTCGACGCGTCCGACCTGCGCCAGCTCGACGGTCCGCGCCTTCTCGAGCTGAAGGTGCCGCTCACGAACC GCTACCGCGTCGCGCTCGCCTATCCGTCGATCGAGCTCACGCTGCTCGACGAAGCGAACAACATCACCGCGCGCCGCGTG CTCGCGCCGCGCGATTACGTGCGTCCCGGCACGCGCGTCGAAGCGGGCATGCCCGCCGGCGCGACCCAGACGATGATCGT GCGGATCGATACGGACGGCGTCGCCGCGTCGAACTTCCGCGTCCAGATCTTTTATCCGTAA
Upstream 100 bases:
>100_bases GCGAACACGAAGGTTGGGTATGCCTCGCCGGAACGCGGCGGGAAAGCCATTAGAATAAGCGCTGTCCTTCACTCAGGCCC CGCTGGCTGCCCGGCTGACC
Downstream 100 bases:
>100_bases CGCGCCGCGACGCGGCGCGCGGCCTCAACCCGTGCGCCGCATCGGCGCACACACTTGGAGCACGAACATGAGCAAAGTCA CGCTGGGTGGCAACCCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Zinc Finger/Thioredoxin; Zinc Finger/Thioredoxin Domain Protein; FHA Domain-Containing Protein
Number of amino acids: Translated: 446; Mature: 446
Protein sequence:
>446_residues MLLATRCPHCETVFRLQREQLALHDGLVRCGHCRQVFDAARALVPAEPEAAAAQAAPHAPEQQPAPPRRLFDATSPDRRP LEAGHRDFAPGAWDMWAPWLDGAVDPKLQMTSTSVSTASDGAVATSAAADEARNAESDAPTQQARKASDTQAALAPRPGE RTTHASPETGTGAHAARTSEADPPAAGAREFPPPPPPTLDLDRSATAKREPDAARASAPPPRDAVEPVLASPADAAAALD RALHDHEPHFGAAAPSRASAEPFAAAPDADNREHFAMTRETRTNAARGGFARALGVSIAFALAALLAAQLAWWQRETITI YWPSTEPLFKQACATLGCTVTPPRAIDGLRLDASDLRQLDGPRLLELKVPLTNRYRVALAYPSIELTLLDEANNITARRV LAPRDYVRPGTRVEAGMPAGATQTMIVRIDTDGVAASNFRVQIFYP
Sequences:
>Translated_446_residues MLLATRCPHCETVFRLQREQLALHDGLVRCGHCRQVFDAARALVPAEPEAAAAQAAPHAPEQQPAPPRRLFDATSPDRRP LEAGHRDFAPGAWDMWAPWLDGAVDPKLQMTSTSVSTASDGAVATSAAADEARNAESDAPTQQARKASDTQAALAPRPGE RTTHASPETGTGAHAARTSEADPPAAGAREFPPPPPPTLDLDRSATAKREPDAARASAPPPRDAVEPVLASPADAAAALD RALHDHEPHFGAAAPSRASAEPFAAAPDADNREHFAMTRETRTNAARGGFARALGVSIAFALAALLAAQLAWWQRETITI YWPSTEPLFKQACATLGCTVTPPRAIDGLRLDASDLRQLDGPRLLELKVPLTNRYRVALAYPSIELTLLDEANNITARRV LAPRDYVRPGTRVEAGMPAGATQTMIVRIDTDGVAASNFRVQIFYP >Mature_446_residues MLLATRCPHCETVFRLQREQLALHDGLVRCGHCRQVFDAARALVPAEPEAAAAQAAPHAPEQQPAPPRRLFDATSPDRRP LEAGHRDFAPGAWDMWAPWLDGAVDPKLQMTSTSVSTASDGAVATSAAADEARNAESDAPTQQARKASDTQAALAPRPGE RTTHASPETGTGAHAARTSEADPPAAGAREFPPPPPPTLDLDRSATAKREPDAARASAPPPRDAVEPVLASPADAAAALD RALHDHEPHFGAAAPSRASAEPFAAAPDADNREHFAMTRETRTNAARGGFARALGVSIAFALAALLAAQLAWWQRETITI YWPSTEPLFKQACATLGCTVTPPRAIDGLRLDASDLRQLDGPRLLELKVPLTNRYRVALAYPSIELTLLDEANNITARRV LAPRDYVRPGTRVEAGMPAGATQTMIVRIDTDGVAASNFRVQIFYP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47580; Mature: 47580
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLATRCPHCETVFRLQREQLALHDGLVRCGHCRQVFDAARALVPAEPEAAAAQAAPHAP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCC EQQPAPPRRLFDATSPDRRPLEAGHRDFAPGAWDMWAPWLDGAVDPKLQMTSTSVSTASD CCCCCCHHHHCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCC GAVATSAAADEARNAESDAPTQQARKASDTQAALAPRPGERTTHASPETGTGAHAARTSE CCEEEHHHHHHHHCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC ADPPAAGAREFPPPPPPTLDLDRSATAKREPDAARASAPPPRDAVEPVLASPADAAAALD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHH RALHDHEPHFGAAAPSRASAEPFAAAPDADNREHFAMTRETRTNAARGGFARALGVSIAF HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCHHHHHHHHHHH ALAALLAAQLAWWQRETITIYWPSTEPLFKQACATLGCTVTPPRAIDGLRLDASDLRQLD HHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCEECHHHHHHCC GPRLLELKVPLTNRYRVALAYPSIELTLLDEANNITARRVLAPRDYVRPGTRVEAGMPAG CCEEEEEECCCCCCEEEEEECCCEEEEEECCCCCCEEHEEECCHHHCCCCCEEECCCCCC ATQTMIVRIDTDGVAASNFRVQIFYP CCEEEEEEECCCCCEECCEEEEEECC >Mature Secondary Structure MLLATRCPHCETVFRLQREQLALHDGLVRCGHCRQVFDAARALVPAEPEAAAAQAAPHAP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCC EQQPAPPRRLFDATSPDRRPLEAGHRDFAPGAWDMWAPWLDGAVDPKLQMTSTSVSTASD CCCCCCHHHHCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCC GAVATSAAADEARNAESDAPTQQARKASDTQAALAPRPGERTTHASPETGTGAHAARTSE CCEEEHHHHHHHHCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC ADPPAAGAREFPPPPPPTLDLDRSATAKREPDAARASAPPPRDAVEPVLASPADAAAALD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHH RALHDHEPHFGAAAPSRASAEPFAAAPDADNREHFAMTRETRTNAARGGFARALGVSIAF HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCHHHHHHHHHHH ALAALLAAQLAWWQRETITIYWPSTEPLFKQACATLGCTVTPPRAIDGLRLDASDLRQLD HHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCEECHHHHHHCC GPRLLELKVPLTNRYRVALAYPSIELTLLDEANNITARRVLAPRDYVRPGTRVEAGMPAG CCEEEEEECCCCCCEEEEEECCCEEEEEECCCCCCEEHEEECCHHHCCCCCEEECCCCCC ATQTMIVRIDTDGVAASNFRVQIFYP CCEEEEEEECCCCCEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA