| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83719076
Identifier: 83719076
GI number: 83719076
Start: 419457
End: 420650
Strand: Direct
Name: 83719076
Synonym: BTH_I0377
Alternate gene names: NA
Gene position: 419457-420650 (Clockwise)
Preceding gene: 83720907
Following gene: 83719806
Centisome position: 11.01
GC content: 73.37
Gene sequence:
>1194_bases ATGACACCCGCCGCGCGCAGGCAGCGTCGTCATTCGACGCTCGCGCGTCAGGCGTTCGCTGTCTACGCGGCGCTCGTCGT CTATGCGTCGCTTTATCCGTTCGCGGGCTGGCGCTCGCTCGGCATCGGCCCGTTCGATTTTCTGCTCGCGCCGCTGCCGC GCTATCTGACCGCGTTCGACGTCGTCAGCAACGTGATCGGCTATCTGCCGTTCGGCGCGCTCGCGGTGCTCGCGCTCTAT CCACTGCGGGGCGTGCCGGCCGCACTCGTCGCGACATTGCTCGGCGCGCTGCTCTCGGGCGCGATGGAGGCGCTGCAGAC CTATCTGCCGACGCGCGTGTCGTCGAACCTCGATCTCGCGGCGAACGCGCTCGGCGCGCTCGTCGGCGCGGCGGCGGCCG CGCCCGCCGCGACCGCGCTGATCGAGCGCGGCATCGTGCGGCGCGTGCGCTTCGCGTGGTTCGAGCGCGAAGCGTCGACG CCGCTCTTCCTGAGCGCGCTGTGGGCGGGCGCGATCCTGTTTCCGTCGCCGTTCCTGTTCGGCATCGGCGACTGGCCGAG CGAGCTGTGGGCGCGCGCCGACGTGTCGATGCGCGGCGCGCTCCTCGCGTGGGCGCCGAGCGCGTGGAACGTCCCCGCGT GGCCGGACCGGCTCGACGGCCTCATGTCAGATTCCGCGTGGGAGACGCTGCTCGCCGCGCTCGGCCTGTTCGCGGCGCTC GCGGTCGCGTCGCTCGCGATGCGCGAGCGCGCGCCGCGCGTGCGGCTCGTCGTCGGTTTCACCGCGCTCGCGCTTGCATT GAAGGCGGCCGCGACATTCATGCAGTCGTACACGGGGCTCGTGTTCGACTGGGCGACGCCGGGCGCGCTGCGCGGCATCG CGGCGGGCCTCGTCGCCGCGATCGTCGCGCTGCGGCTGCCGGGCGCATGGCGCGTGGCGCTCGCGGCGGCCGCGCTCGCC GTCGCGCTCGCGCTCGTCAACGTGCTGCCCGTCAATCCGTTCTTCGATTTCGCGCTGTCCGGCTGGCGGCAGGGCCGCTA CGTGCACTTCAACAGCATCGCGCGCTGGCTCGCGTGGTTCTGGCCGTACGCGGCGCTCGTCTGGCTCGCCGGCCGCGCGG AGCGCGCGTGGCTCGCGAAGCACGGCGCGGGCGCGTCGCGCGGCGCCAGCGGCAAACGGCGCCGGTCGCTATAA
Upstream 100 bases:
>100_bases GCGCAGCTCGTCGCGTGGCTCGGCGTCCAGACGTACGCGGCCACGCCATGAACGCCGCCGCGCACGCCGCGCCTGCCGCG CCGTGCGCGGCGCCGCCGAG
Downstream 100 bases:
>100_bases TCGGCCACGAATCCGCGACGAATCGGCTACGGCTAGCCCGCCGATTCCGGCCGATCGTCTTCGTCCGGTTTCCGTCCGAG GTTCTGTCCGAGGTTCTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: VanZ Like Protein; Transmembrane Protein
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MTPAARRQRRHSTLARQAFAVYAALVVYASLYPFAGWRSLGIGPFDFLLAPLPRYLTAFDVVSNVIGYLPFGALAVLALY PLRGVPAALVATLLGALLSGAMEALQTYLPTRVSSNLDLAANALGALVGAAAAAPAATALIERGIVRRVRFAWFEREAST PLFLSALWAGAILFPSPFLFGIGDWPSELWARADVSMRGALLAWAPSAWNVPAWPDRLDGLMSDSAWETLLAALGLFAAL AVASLAMRERAPRVRLVVGFTALALALKAAATFMQSYTGLVFDWATPGALRGIAAGLVAAIVALRLPGAWRVALAAAALA VALALVNVLPVNPFFDFALSGWRQGRYVHFNSIARWLAWFWPYAALVWLAGRAERAWLAKHGAGASRGASGKRRRSL
Sequences:
>Translated_397_residues MTPAARRQRRHSTLARQAFAVYAALVVYASLYPFAGWRSLGIGPFDFLLAPLPRYLTAFDVVSNVIGYLPFGALAVLALY PLRGVPAALVATLLGALLSGAMEALQTYLPTRVSSNLDLAANALGALVGAAAAAPAATALIERGIVRRVRFAWFEREAST PLFLSALWAGAILFPSPFLFGIGDWPSELWARADVSMRGALLAWAPSAWNVPAWPDRLDGLMSDSAWETLLAALGLFAAL AVASLAMRERAPRVRLVVGFTALALALKAAATFMQSYTGLVFDWATPGALRGIAAGLVAAIVALRLPGAWRVALAAAALA VALALVNVLPVNPFFDFALSGWRQGRYVHFNSIARWLAWFWPYAALVWLAGRAERAWLAKHGAGASRGASGKRRRSL >Mature_396_residues TPAARRQRRHSTLARQAFAVYAALVVYASLYPFAGWRSLGIGPFDFLLAPLPRYLTAFDVVSNVIGYLPFGALAVLALYP LRGVPAALVATLLGALLSGAMEALQTYLPTRVSSNLDLAANALGALVGAAAAAPAATALIERGIVRRVRFAWFEREASTP LFLSALWAGAILFPSPFLFGIGDWPSELWARADVSMRGALLAWAPSAWNVPAWPDRLDGLMSDSAWETLLAALGLFAALA VASLAMRERAPRVRLVVGFTALALALKAAATFMQSYTGLVFDWATPGALRGIAAGLVAAIVALRLPGAWRVALAAAALAV ALALVNVLPVNPFFDFALSGWRQGRYVHFNSIARWLAWFWPYAALVWLAGRAERAWLAKHGAGASRGASGKRRRSL
Specific function: Unknown
COG id: COG5652
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42422; Mature: 42291
Theoretical pI: Translated: 11.71; Mature: 11.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPAARRQRRHSTLARQAFAVYAALVVYASLYPFAGWRSLGIGPFDFLLAPLPRYLTAFD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHH VVSNVIGYLPFGALAVLALYPLRGVPAALVATLLGALLSGAMEALQTYLPTRVSSNLDLA HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH ANALGALVGAAAAAPAATALIERGIVRRVRFAWFEREASTPLFLSALWAGAILFPSPFLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEE GIGDWPSELWARADVSMRGALLAWAPSAWNVPAWPDRLDGLMSDSAWETLLAALGLFAAL CCCCCHHHHHHHCCCHHCCHHEEECCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHH AVASLAMRERAPRVRLVVGFTALALALKAAATFMQSYTGLVFDWATPGALRGIAAGLVAA HHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHH IVALRLPGAWRVALAAAALAVALALVNVLPVNPFFDFALSGWRQGRYVHFNSIARWLAWF HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHH WPYAALVWLAGRAERAWLAKHGAGASRGASGKRRRSL HHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHCCC >Mature Secondary Structure TPAARRQRRHSTLARQAFAVYAALVVYASLYPFAGWRSLGIGPFDFLLAPLPRYLTAFD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHH VVSNVIGYLPFGALAVLALYPLRGVPAALVATLLGALLSGAMEALQTYLPTRVSSNLDLA HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH ANALGALVGAAAAAPAATALIERGIVRRVRFAWFEREASTPLFLSALWAGAILFPSPFLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEE GIGDWPSELWARADVSMRGALLAWAPSAWNVPAWPDRLDGLMSDSAWETLLAALGLFAAL CCCCCHHHHHHHCCCHHCCHHEEECCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHH AVASLAMRERAPRVRLVVGFTALALALKAAATFMQSYTGLVFDWATPGALRGIAAGLVAA HHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHH IVALRLPGAWRVALAAAALAVALALVNVLPVNPFFDFALSGWRQGRYVHFNSIARWLAWF HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHH WPYAALVWLAGRAERAWLAKHGAGASRGASGKRRRSL HHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA