| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is mdtP [H]
Identifier: 83719074
GI number: 83719074
Start: 2920618
End: 2922201
Strand: Direct
Name: mdtP [H]
Synonym: BTH_I2559
Alternate gene names: 83719074
Gene position: 2920618-2922201 (Clockwise)
Preceding gene: 83721351
Following gene: 83720021
Centisome position: 76.67
GC content: 68.24
Gene sequence:
>1584_bases TTGCCACAACAAGTAATTCAGACAGATAAATGTAAGGAAATCCTTGCAGTGTCCATTATTCATTCCGAGTCAGGAAACAC AGCGATGAAAACCTTCCCGTTGTCCGCTTGCCGAACCGCCACGGCCGTCGCGGTCGCCGTGCTCGCGCTCGCGGGATGCG CGAACTATTTCGGCATCAAGAGCGACAAGGCGATCGCGCCCGCGACGCAGTTCGAGAGCGCGCAGAGCCTGCCGGCGCAA GGCGGCCGGTGGCCGTCGCTCGACTGGGCGAACCAGTTCGGCGATCCGCAACTGCCCAAGCTGATCGACGAGGCGCTCGA AGGCAATCCGACGATCGCGCAAGCGCAGGCGCGCATCGCGAAGGCATCGTCGTACATCGAATCGTCGCGCTCGACGCTGC TGCCGAAGGCGGACGCGAAGTACTCGTGGACCCGCGAGCTGTATTCGAGCAACGCCCTCGTCCCGCCGCCCTTCGGCGGT CAGTGGTACAGCGAGAACAACGCGCTCGCGAGCGCGTCGTGGGAACTCGACCTGTGGGGCAAGAACCGCGCGCGCCTCAA TGCGGCCGTGTCGCAGGAAAAGGCCGCCGAAGCCGACATGCAGCAGGCGCGCGTGACGCTCGCGACGTCGGTCGCGCGCA CGTACAACCAGCTCGCGCAGTTGTACGCGCTGCGCGACATCGCCGAGCGCGAGATCTCGAACCGGCAGACGGTCGGCAAG ATCACCGACGGCCGCGTCGGCGCGGGCCTCGACACGAACGTCGAGCGCCAGACCGCGCTCGGCAACATCGCGACGAGCCA GTCGACGCTGTCCGATCTCGACGGCCAGATCACGAACGTCCGCTATCAGCTCGCCGCGCTGCTCGGCAAGGGCCCGGACC GCGGGCTGCAGATTGCCGCGCCGGTGCTGAGCCCGGGCGGCGGGGTCGCGCTGCCGGACAACCTGCCCGCCGATCTCGTA TCGCGCCGCCCGGACCTCGTCGCCGCGCGCTGGCAAGTCGAGGCGGCGATGCACGACGTGAAGGAAGCGAAGGCCGAGTT CTTCCCGGACATCAATCTTGCGGCGGGCCTCGGCTTCGACGCGTTCGGCTGGGGCCGCTTCCTGAACTTCGCGAGCCGCC AGGCGCAATTCGGCCCGGCGATCCATCTGCCGATCTTCGACGGCGGCGCGCTGCGCGCGCAACTGAAGGGCCGCTACGCG GACTTCGATCTGTCGGTCGCGAACTACAACCAGACGCTCGTGAGCGCGCTGAACGACGTCGCGACGCAAGTCGCGTCGAT CCGCTCGATCGACACGCAGATGGGCGACGCGCAGCGCGCGCTCGATGCGTCGACGCGCGCGTACGAGCTCGCGGTGATCC GCTACAAGGCGGGCCTGTCGCCGCAGCTGCAGGTGCTGAACGCGGACAGCAACCGGCTCGCCGCCGAGCAGACGGTGACG AACCTGAAGATGCGCCGCCGCGATCTGCAGATCGGTCTCGTGAAGGCGCTCGGCGGCGGCTTCGACGCGACCGGCACGCG GCTCGCCACGCCCGCACCGGCAGTGGCGGCGGCCGCCGCACCCGCGCGGCACGCGTCGAACTGA
Upstream 100 bases:
>100_bases CTTCACGCCCGAGGAAGTCGGCTTCCTCAAGAGCATGCTGCGCCGCATTCTCGTCAATTCCGGCGAATGTCCGGGCTCGA CCGGAAGCACGTCGTAAATA
Downstream 100 bases:
>100_bases CCCGCATCATTCCCGGCACGCCGGATTCATCGCTTCAATCGCTTAGATACAAGACGGAGAAACTCGCCATGAGCGACCCT CAACAAAACGCAGCGCCCGC
Product: RND efflux system outer membrane lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 527; Mature: 526
Protein sequence:
>527_residues MPQQVIQTDKCKEILAVSIIHSESGNTAMKTFPLSACRTATAVAVAVLALAGCANYFGIKSDKAIAPATQFESAQSLPAQ GGRWPSLDWANQFGDPQLPKLIDEALEGNPTIAQAQARIAKASSYIESSRSTLLPKADAKYSWTRELYSSNALVPPPFGG QWYSENNALASASWELDLWGKNRARLNAAVSQEKAAEADMQQARVTLATSVARTYNQLAQLYALRDIAEREISNRQTVGK ITDGRVGAGLDTNVERQTALGNIATSQSTLSDLDGQITNVRYQLAALLGKGPDRGLQIAAPVLSPGGGVALPDNLPADLV SRRPDLVAARWQVEAAMHDVKEAKAEFFPDINLAAGLGFDAFGWGRFLNFASRQAQFGPAIHLPIFDGGALRAQLKGRYA DFDLSVANYNQTLVSALNDVATQVASIRSIDTQMGDAQRALDASTRAYELAVIRYKAGLSPQLQVLNADSNRLAAEQTVT NLKMRRRDLQIGLVKALGGGFDATGTRLATPAPAVAAAAAPARHASN
Sequences:
>Translated_527_residues MPQQVIQTDKCKEILAVSIIHSESGNTAMKTFPLSACRTATAVAVAVLALAGCANYFGIKSDKAIAPATQFESAQSLPAQ GGRWPSLDWANQFGDPQLPKLIDEALEGNPTIAQAQARIAKASSYIESSRSTLLPKADAKYSWTRELYSSNALVPPPFGG QWYSENNALASASWELDLWGKNRARLNAAVSQEKAAEADMQQARVTLATSVARTYNQLAQLYALRDIAEREISNRQTVGK ITDGRVGAGLDTNVERQTALGNIATSQSTLSDLDGQITNVRYQLAALLGKGPDRGLQIAAPVLSPGGGVALPDNLPADLV SRRPDLVAARWQVEAAMHDVKEAKAEFFPDINLAAGLGFDAFGWGRFLNFASRQAQFGPAIHLPIFDGGALRAQLKGRYA DFDLSVANYNQTLVSALNDVATQVASIRSIDTQMGDAQRALDASTRAYELAVIRYKAGLSPQLQVLNADSNRLAAEQTVT NLKMRRRDLQIGLVKALGGGFDATGTRLATPAPAVAAAAAPARHASN >Mature_526_residues PQQVIQTDKCKEILAVSIIHSESGNTAMKTFPLSACRTATAVAVAVLALAGCANYFGIKSDKAIAPATQFESAQSLPAQG GRWPSLDWANQFGDPQLPKLIDEALEGNPTIAQAQARIAKASSYIESSRSTLLPKADAKYSWTRELYSSNALVPPPFGGQ WYSENNALASASWELDLWGKNRARLNAAVSQEKAAEADMQQARVTLATSVARTYNQLAQLYALRDIAEREISNRQTVGKI TDGRVGAGLDTNVERQTALGNIATSQSTLSDLDGQITNVRYQLAALLGKGPDRGLQIAAPVLSPGGGVALPDNLPADLVS RRPDLVAARWQVEAAMHDVKEAKAEFFPDINLAAGLGFDAFGWGRFLNFASRQAQFGPAIHLPIFDGGALRAQLKGRYAD FDLSVANYNQTLVSALNDVATQVASIRSIDTQMGDAQRALDASTRAYELAVIRYKAGLSPQLQVLNADSNRLAAEQTVTN LKMRRRDLQIGLVKALGGGFDATGTRLATPAPAVAAAAAPARHASN
Specific function: Could be involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride [H]
COG id: COG1538
COG function: function code MU; Outer membrane protein
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]
Homologues:
Organism=Escherichia coli, GI2367348, Length=466, Percent_Identity=30.68669527897, Blast_Score=191, Evalue=1e-49, Organism=Escherichia coli, GI1786785, Length=460, Percent_Identity=26.9565217391304, Blast_Score=122, Evalue=4e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003423 - InterPro: IPR010131 [H]
Pfam domain/function: PF02321 OEP [H]
EC number: NA
Molecular weight: Translated: 56229; Mature: 56098
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQQVIQTDKCKEILAVSIIHSESGNTAMKTFPLSACRTATAVAVAVLALAGCANYFGIK CCCHHHHHHHHHHHHEEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCC SDKAIAPATQFESAQSLPAQGGRWPSLDWANQFGDPQLPKLIDEALEGNPTIAQAQARIA CCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHH KASSYIESSRSTLLPKADAKYSWTRELYSSNALVPPPFGGQWYSENNALASASWELDLWG HHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECEEEEEECC KNRARLNAAVSQEKAAEADMQQARVTLATSVARTYNQLAQLYALRDIAEREISNRQTVGK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ITDGRVGAGLDTNVERQTALGNIATSQSTLSDLDGQITNVRYQLAALLGKGPDRGLQIAA CCCCCCCCCCCCCCHHHHHHCCHHCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEE PVLSPGGGVALPDNLPADLVSRRPDLVAARWQVEAAMHDVKEAKAEFFPDINLAAGLGFD CEECCCCCEECCCCCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCC AFGWGRFLNFASRQAQFGPAIHLPIFDGGALRAQLKGRYADFDLSVANYNQTLVSALNDV HHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEHEECCCCCCEEEEECCCHHHHHHHHHHH ATQVASIRSIDTQMGDAQRALDASTRAYELAVIRYKAGLSPQLQVLNADSNRLAAEQTVT HHHHHHHHHHHHHHCHHHHHHHCCCCEEEEEEEEEECCCCCEEEEEECCCCHHHHHHHHH NLKMRRRDLQIGLVKALGGGFDATGTRLATPAPAVAAAAAPARHASN HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCHHCCCC >Mature Secondary Structure PQQVIQTDKCKEILAVSIIHSESGNTAMKTFPLSACRTATAVAVAVLALAGCANYFGIK CCHHHHHHHHHHHHEEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCC SDKAIAPATQFESAQSLPAQGGRWPSLDWANQFGDPQLPKLIDEALEGNPTIAQAQARIA CCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHH KASSYIESSRSTLLPKADAKYSWTRELYSSNALVPPPFGGQWYSENNALASASWELDLWG HHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECEEEEEECC KNRARLNAAVSQEKAAEADMQQARVTLATSVARTYNQLAQLYALRDIAEREISNRQTVGK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ITDGRVGAGLDTNVERQTALGNIATSQSTLSDLDGQITNVRYQLAALLGKGPDRGLQIAA CCCCCCCCCCCCCCHHHHHHCCHHCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEE PVLSPGGGVALPDNLPADLVSRRPDLVAARWQVEAAMHDVKEAKAEFFPDINLAAGLGFD CEECCCCCEECCCCCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCC AFGWGRFLNFASRQAQFGPAIHLPIFDGGALRAQLKGRYADFDLSVANYNQTLVSALNDV HHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEHEECCCCCCEEEEECCCHHHHHHHHHHH ATQVASIRSIDTQMGDAQRALDASTRAYELAVIRYKAGLSPQLQVLNADSNRLAAEQTVT HHHHHHHHHHHHHHCHHHHHHHCCCCEEEEEEEEEECCCCCEEEEEECCCCHHHHHHHHH NLKMRRRDLQIGLVKALGGGFDATGTRLATPAPAVAAAAAPARHASN HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]