| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83719055
Identifier: 83719055
GI number: 83719055
Start: 326843
End: 327799
Strand: Reverse
Name: 83719055
Synonym: BTH_I0292
Alternate gene names: NA
Gene position: 327799-326843 (Counterclockwise)
Preceding gene: 83718470
Following gene: 83719649
Centisome position: 8.61
GC content: 79.73
Gene sequence:
>957_bases ATGACCGTCCCCGCCGACACCTGCGACACATCCGCGGCCCGCACCGCGCGGGTCGTGCTGATCACGGGCGCCGTGCATAC GGGCGCCGCGCAAGCATGCGCCGCCGAAGCGGCACGGGCGGTCGCACCGCAGGCGGCCGATGCCGCCCCGGCGGGCGACG CGCCATCCTGCGCGCCGACGGCGGATGGCGCGCCGATGGGCGCCCCGCGAGCAGGCGGGCAGCAGGCGGACACCGCTTCG CATGCCGCGCGCCCGGGCGGCGCGCCCACCGCCGCGCGGCCCGCGCCCGACGCCGCGGCCGTCGGACGCGCGCTCGCCGT CGGCTTCGCTCGGCGCGGCTGGGACGTCGCGCTCGCGGCCGCCGCGGGCGACGAAGCCCGCGCGGCCGCCGCGCTCGCCG CCGAAGTCGAGGCGCTCGGCCGCCGCGCGGCGGTGCTCGTCGCCGATCTGTCGGCCGAGACGGATGTCGCGCGGCTCGTC GCCGAGTGCGGCGCGGCGCTCGGCCGGCCGGCGTGCGTCGTCGCGCAGCCCGCGCCCGTCGCGGACAACGCGCGCGACGT CGGCTACGCGTCGCTCGCGTGCGCGATGGCGCGCGGCGTCGCCGCGCCGCTCGTGCTCGCGCGCACGCTCGCCGACGCGA CGCCCGACGCCGCGCGCGACGACGAGCGCGAGCGCGCGGTCGTGATTCATCTGCTCGACGAGACGCTGTTTCATCCGGCG CCCGAGCGCCTGTCGCACTCGCTCGCGCAAGCCGCGCTGCACCGCGCGACCACCGCGCAGGCGCTCGCGCTCGCGCCGAA GGTGCGGGTAGTCGGCCTCGTGCGCGGGCGGGCGCCGCGCGCGGACGACATCGCCGACGCCGCGTGCTATCTCGCGGATG CGCCGGGCGTGACGGGCGCGACGCTGACCGTCGACGGCGGCGAGCATCTCGCGCCGCCCGCCGACGAACGGAATTGA
Upstream 100 bases:
>100_bases CAGCGAAGCGGCGAGCGCTTCGGACTGCGCGAGCGCGTCGGGGCCGGGAACGGGTAAACTAGCGGGTTCGTGAGCTTTCG GATTCATCCCGGCATTGTAA
Downstream 100 bases:
>100_bases CGGGCGCGGCCTCGTGCGGACATCTCGACGCCGCGCGTGGCCGCGCCCCTTTGCATGCATCACCCTTTGACTGGAACGAC CATGTTTGCCGCCCTCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Short Chain Dehydrogenase; 3-Oxoacyl-[Acyl-Carrier Protein] Reductase; Short-Chain Alcohol Dehydrogenase; Short-Chain Dehydrogenase/Reductase Sdr
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MTVPADTCDTSAARTARVVLITGAVHTGAAQACAAEAARAVAPQAADAAPAGDAPSCAPTADGAPMGAPRAGGQQADTAS HAARPGGAPTAARPAPDAAAVGRALAVGFARRGWDVALAAAAGDEARAAAALAAEVEALGRRAAVLVADLSAETDVARLV AECGAALGRPACVVAQPAPVADNARDVGYASLACAMARGVAAPLVLARTLADATPDAARDDERERAVVIHLLDETLFHPA PERLSHSLAQAALHRATTAQALALAPKVRVVGLVRGRAPRADDIADAACYLADAPGVTGATLTVDGGEHLAPPADERN
Sequences:
>Translated_318_residues MTVPADTCDTSAARTARVVLITGAVHTGAAQACAAEAARAVAPQAADAAPAGDAPSCAPTADGAPMGAPRAGGQQADTAS HAARPGGAPTAARPAPDAAAVGRALAVGFARRGWDVALAAAAGDEARAAAALAAEVEALGRRAAVLVADLSAETDVARLV AECGAALGRPACVVAQPAPVADNARDVGYASLACAMARGVAAPLVLARTLADATPDAARDDERERAVVIHLLDETLFHPA PERLSHSLAQAALHRATTAQALALAPKVRVVGLVRGRAPRADDIADAACYLADAPGVTGATLTVDGGEHLAPPADERN >Mature_317_residues TVPADTCDTSAARTARVVLITGAVHTGAAQACAAEAARAVAPQAADAAPAGDAPSCAPTADGAPMGAPRAGGQQADTASH AARPGGAPTAARPAPDAAAVGRALAVGFARRGWDVALAAAAGDEARAAAALAAEVEALGRRAAVLVADLSAETDVARLVA ECGAALGRPACVVAQPAPVADNARDVGYASLACAMARGVAAPLVLARTLADATPDAARDDERERAVVIHLLDETLFHPAP ERLSHSLAQAALHRATTAQALALAPKVRVVGLVRGRAPRADDIADAACYLADAPGVTGATLTVDGGEHLAPPADERN
Specific function: Unknown
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31383; Mature: 31252
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVPADTCDTSAARTARVVLITGAVHTGAAQACAAEAARAVAPQAADAAPAGDAPSCAPT CCCCCCCCCCCHHCCEEEEEEECCCHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC ADGAPMGAPRAGGQQADTASHAARPGGAPTAARPAPDAAAVGRALAVGFARRGWDVALAA CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEE AAGDEARAAAALAAEVEALGRRAAVLVADLSAETDVARLVAECGAALGRPACVVAQPAPV CCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCC ADNARDVGYASLACAMARGVAAPLVLARTLADATPDAARDDERERAVVIHLLDETLFHPA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHCCCC PERLSHSLAQAALHRATTAQALALAPKVRVVGLVRGRAPRADDIADAACYLADAPGVTGA HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCE TLTVDGGEHLAPPADERN EEEECCCCCCCCCCCCCC >Mature Secondary Structure TVPADTCDTSAARTARVVLITGAVHTGAAQACAAEAARAVAPQAADAAPAGDAPSCAPT CCCCCCCCCCHHCCEEEEEEECCCHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC ADGAPMGAPRAGGQQADTASHAARPGGAPTAARPAPDAAAVGRALAVGFARRGWDVALAA CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEE AAGDEARAAAALAAEVEALGRRAAVLVADLSAETDVARLVAECGAALGRPACVVAQPAPV CCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCC ADNARDVGYASLACAMARGVAAPLVLARTLADATPDAARDDERERAVVIHLLDETLFHPA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHCCCC PERLSHSLAQAALHRATTAQALALAPKVRVVGLVRGRAPRADDIADAACYLADAPGVTGA HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCE TLTVDGGEHLAPPADERN EEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA