| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83719044
Identifier: 83719044
GI number: 83719044
Start: 3350818
End: 3352590
Strand: Reverse
Name: 83719044
Synonym: BTH_I2916
Alternate gene names: NA
Gene position: 3352590-3350818 (Counterclockwise)
Preceding gene: 83719996
Following gene: 83720209
Centisome position: 88.01
GC content: 70.56
Gene sequence:
>1773_bases GTGACGCTCACGCTCGCCGATCCCGATCCGGCCGGTCAGCGCTTTGCGCTGCCCGCATGGATTCCGGGCAGCTACATGGT GCGCGAGTTCGCGCGCAACATCGTGACGCTGCGCGCGTTCAACGACGCGGGCCGCAGGTTGCGGATCGGCAAGCTCGACA AGCACACCTGGCAGGCCGCGCCGTCGCCCGGAGCGATCACGCTGCGCTACGACGTCTACGCATGGGATCTGTCGGTGCGC GCCGCGCATCTCGACGACACGGGCGGCTTCTTCAACGGCACGAGCGTGTTTCTCGCGCCGCTCGGCCACGAGGACGCGCC GTGCGAGGTGATGATCGAGCGCCCGGCGGGCGACGCGTACCGGCGCTGGCGCGTCGCCACCGCGCTGCCGGAGGCGCGCG GCACGAAGCGCTACGGCTTCGGCGCGTACCGCGCGCAGAACTACGACGAGCTGATCGACCATCCGGTCACGCTCGGCGAG TTCGCGCTCGCGTCGTTCGACGCGCACGGCGTGCCGCACGACATCGCGATCGCGGGCCGCGTGACCGGGCTCGATCTCGA GCGGCTGGCGGCCGACCTGAAGCGCGTGTGCGAAGCGCAGATCGCGCTGTTCGAGCCGAAGACGAAGCGCGCGCCGATGT CGCGCTACGTGTTCATGACGCAGGCCGTCAGCGACGGCTACGGCGGGCTCGAGCATCGCGCGTCGACGGCGCTCGTCTGC AATCGCACCGACCTGCCGGTGAAGGGGCGCACGGAGAAGACGGAGGGCTATCGGACCTATCTCGGCCTGTGCAGCCACGA GTATTTCCACACGTGGAACGTAAAGCGGATCAAGCCGGCCGCATTCGCGCCGTACGACCTGTCGCGGGAGAACCATACGT CGCTGCTGTGGCTCTTCGAGGGCTTCACGTCGTACTACGACGACCTGATGCTCGTGCGCAGCGGCCTGATCTCGCAAGAC GACTACTTCGCGCTCGTCGGCCGCACGATCGCCGGCGTGCAGCGCGGCGCCGGCCGGCTCAAGCAGAGCGTCGCCGAAAG CTCGTTCGACGCATGGATCAAGTATTACCGGCAGGACGAGAACGCGACGAACGCGATCGTCAGCTATTACACGAAGGGCT CGCTTGTCGCGCTCGCGTTCGATCTGGCGATCCGCGCGCGGACCCGCCACCGCAAGTCGCTCGACGACGTGATGCGGTTC TTGTGGCAGCGGTTCGGGCGCGACTTCTACGACGGCAAGCCGAACGGCGTCGGCGAGGGCGACGTGAAGGCGCTGATCGC CGAGGCGACGGGCGTCGATCTCGGCCGCCTCTTCGACGATGCGGTGTCCGGCACGCGCGATCTGCCGCTGGCCGCGCTCC TCGAGCCGTTCGGCGTGACGCTCGCGCCGGACGCGGGCGCGAACGGCTCGGCCGACGCGCCCCCGAAGCCGACGCTCGGC GCGCGCACCCGGGGCGGCGCGGAATGCACGCTCGCGGCCGTCTACGAAGGCGGCGCCGCGCATCGGGCGGGGCTGTCCGC GGGCGATGCGCTCGTCGCGATCGACGGGCTGCGCGTGACGGGCTCGAACCTCGACGCGCTGCTCGCGCGCTACCGGGTCG GCGACAAGGTCGAGATCCACGCGTTCCGGCGCGACGAGCTGCGCGTCGCGCATCTCAAGCTCGACGGCCCGGACATCGCG CGCTACAAACTGACGGCGCAGCCGAAACCCGCGGCGACGCGCGCCCGCCGCGACGCGTGGCTCGGGTTGCCGGCGGCGCG CGGCCGCCGATAA
Upstream 100 bases:
>100_bases TCGTATCCGTTTCCGTTCCCGCTTGCCCAGACCGATTCCGACGATGAAGCCGATTCGCTACACGATCGTTCCGAAAGACC CCGCCGCGCACCTGTTCGAA
Downstream 100 bases:
>100_bases TCGCGTCGGGCCGGGCGCGGATTGTTTCGCTGTTGCAACAATCCGTCGTCCGGCCGCTGCTTTTTCGCGGCGGCGGCGAT CCGCACAATGGCGTCACTCG
Product: PDZ domain-containing protein
Products: NA
Alternate protein names: Peptidase M; Protease; M61 Family Peptidase; M61 Glycyl Aminopeptidase; M61 Family Glycyl Aminopeptidase; Glycyl Aminopeptidase; Pdz/Dhr/Glgf; Trypsin-Like Serine Protease; Aminopeptidase N Family Protein; Metallopeptidase; PDZ Domain-Containing Protein; PDZ Domain Family Protein; Protease With C-Terminal PDZ Domain-Containing Protein; PDZ/DHR/GLGFPeptidase M; PDZ Domain Protein; Protease With C-Terminal PDZ Domain; Signaling Protein; M61 Glycyl Aminopeptidase Protein; M61 Glycyl Aminopeptidase Family Protein
Number of amino acids: Translated: 590; Mature: 589
Protein sequence:
>590_residues MTLTLADPDPAGQRFALPAWIPGSYMVREFARNIVTLRAFNDAGRRLRIGKLDKHTWQAAPSPGAITLRYDVYAWDLSVR AAHLDDTGGFFNGTSVFLAPLGHEDAPCEVMIERPAGDAYRRWRVATALPEARGTKRYGFGAYRAQNYDELIDHPVTLGE FALASFDAHGVPHDIAIAGRVTGLDLERLAADLKRVCEAQIALFEPKTKRAPMSRYVFMTQAVSDGYGGLEHRASTALVC NRTDLPVKGRTEKTEGYRTYLGLCSHEYFHTWNVKRIKPAAFAPYDLSRENHTSLLWLFEGFTSYYDDLMLVRSGLISQD DYFALVGRTIAGVQRGAGRLKQSVAESSFDAWIKYYRQDENATNAIVSYYTKGSLVALAFDLAIRARTRHRKSLDDVMRF LWQRFGRDFYDGKPNGVGEGDVKALIAEATGVDLGRLFDDAVSGTRDLPLAALLEPFGVTLAPDAGANGSADAPPKPTLG ARTRGGAECTLAAVYEGGAAHRAGLSAGDALVAIDGLRVTGSNLDALLARYRVGDKVEIHAFRRDELRVAHLKLDGPDIA RYKLTAQPKPAATRARRDAWLGLPAARGRR
Sequences:
>Translated_590_residues MTLTLADPDPAGQRFALPAWIPGSYMVREFARNIVTLRAFNDAGRRLRIGKLDKHTWQAAPSPGAITLRYDVYAWDLSVR AAHLDDTGGFFNGTSVFLAPLGHEDAPCEVMIERPAGDAYRRWRVATALPEARGTKRYGFGAYRAQNYDELIDHPVTLGE FALASFDAHGVPHDIAIAGRVTGLDLERLAADLKRVCEAQIALFEPKTKRAPMSRYVFMTQAVSDGYGGLEHRASTALVC NRTDLPVKGRTEKTEGYRTYLGLCSHEYFHTWNVKRIKPAAFAPYDLSRENHTSLLWLFEGFTSYYDDLMLVRSGLISQD DYFALVGRTIAGVQRGAGRLKQSVAESSFDAWIKYYRQDENATNAIVSYYTKGSLVALAFDLAIRARTRHRKSLDDVMRF LWQRFGRDFYDGKPNGVGEGDVKALIAEATGVDLGRLFDDAVSGTRDLPLAALLEPFGVTLAPDAGANGSADAPPKPTLG ARTRGGAECTLAAVYEGGAAHRAGLSAGDALVAIDGLRVTGSNLDALLARYRVGDKVEIHAFRRDELRVAHLKLDGPDIA RYKLTAQPKPAATRARRDAWLGLPAARGRR >Mature_589_residues TLTLADPDPAGQRFALPAWIPGSYMVREFARNIVTLRAFNDAGRRLRIGKLDKHTWQAAPSPGAITLRYDVYAWDLSVRA AHLDDTGGFFNGTSVFLAPLGHEDAPCEVMIERPAGDAYRRWRVATALPEARGTKRYGFGAYRAQNYDELIDHPVTLGEF ALASFDAHGVPHDIAIAGRVTGLDLERLAADLKRVCEAQIALFEPKTKRAPMSRYVFMTQAVSDGYGGLEHRASTALVCN RTDLPVKGRTEKTEGYRTYLGLCSHEYFHTWNVKRIKPAAFAPYDLSRENHTSLLWLFEGFTSYYDDLMLVRSGLISQDD YFALVGRTIAGVQRGAGRLKQSVAESSFDAWIKYYRQDENATNAIVSYYTKGSLVALAFDLAIRARTRHRKSLDDVMRFL WQRFGRDFYDGKPNGVGEGDVKALIAEATGVDLGRLFDDAVSGTRDLPLAALLEPFGVTLAPDAGANGSADAPPKPTLGA RTRGGAECTLAAVYEGGAAHRAGLSAGDALVAIDGLRVTGSNLDALLARYRVGDKVEIHAFRRDELRVAHLKLDGPDIAR YKLTAQPKPAATRARRDAWLGLPAARGRR
Specific function: Unknown
COG id: COG3975
COG function: function code R; Predicted protease with the C-terminal PDZ domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64856; Mature: 64725
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: PS50106 PDZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTLADPDPAGQRFALPAWIPGSYMVREFARNIVTLRAFNDAGRRLRIGKLDKHTWQAA CEEEECCCCCCCCEEECCEECCHHHHHHHHHHHEEEEEEECCCCCEEEECCCCCCCCCCC PSPGAITLRYDVYAWDLSVRAAHLDDTGGFFNGTSVFLAPLGHEDAPCEVMIERPAGDAY CCCCEEEEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCHHH RRWRVATALPEARGTKRYGFGAYRAQNYDELIDHPVTLGEFALASFDAHGVPHDIAIAGR HHEEHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEE VTGLDLERLAADLKRVCEAQIALFEPKTKRAPMSRYVFMTQAVSDGYGGLEHRASTALVC ECCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCHHEEEEEHHHCCCCCCCHHCCCEEEEE NRTDLPVKGRTEKTEGYRTYLGLCSHEYFHTWNVKRIKPAAFAPYDLSRENHTSLLWLFE CCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCEECCCCCCCCCCCCCCCCEEEEEHH GFTSYYDDLMLVRSGLISQDDYFALVGRTIAGVQRGAGRLKQSVAESSFDAWIKYYRQDE HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NATNAIVSYYTKGSLVALAFDLAIRARTRHRKSLDDVMRFLWQRFGRDFYDGKPNGVGEG CHHHHHHEEECCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCC DVKALIAEATGVDLGRLFDDAVSGTRDLPLAALLEPFGVTLAPDAGANGSADAPPKPTLG HHHEEEHHHCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCEECCCCCCCCCCCCCCCCCCC ARTRGGAECTLAAVYEGGAAHRAGLSAGDALVAIDGLRVTGSNLDALLARYRVGDKVEIH CCCCCCCCEEEEEEECCCCHHHCCCCCCCEEEEEECEEEECCCHHHHHHHHCCCCEEEEE AFRRDELRVAHLKLDGPDIARYKLTAQPKPAATRARRDAWLGLPAARGRR EEECCCEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TLTLADPDPAGQRFALPAWIPGSYMVREFARNIVTLRAFNDAGRRLRIGKLDKHTWQAA EEEECCCCCCCCEEECCEECCHHHHHHHHHHHEEEEEEECCCCCEEEECCCCCCCCCCC PSPGAITLRYDVYAWDLSVRAAHLDDTGGFFNGTSVFLAPLGHEDAPCEVMIERPAGDAY CCCCEEEEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCHHH RRWRVATALPEARGTKRYGFGAYRAQNYDELIDHPVTLGEFALASFDAHGVPHDIAIAGR HHEEHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEE VTGLDLERLAADLKRVCEAQIALFEPKTKRAPMSRYVFMTQAVSDGYGGLEHRASTALVC ECCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCHHEEEEEHHHCCCCCCCHHCCCEEEEE NRTDLPVKGRTEKTEGYRTYLGLCSHEYFHTWNVKRIKPAAFAPYDLSRENHTSLLWLFE CCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCEECCCCCCCCCCCCCCCCEEEEEHH GFTSYYDDLMLVRSGLISQDDYFALVGRTIAGVQRGAGRLKQSVAESSFDAWIKYYRQDE HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NATNAIVSYYTKGSLVALAFDLAIRARTRHRKSLDDVMRFLWQRFGRDFYDGKPNGVGEG CHHHHHHEEECCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCC DVKALIAEATGVDLGRLFDDAVSGTRDLPLAALLEPFGVTLAPDAGANGSADAPPKPTLG HHHEEEHHHCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCEECCCCCCCCCCCCCCCCCCC ARTRGGAECTLAAVYEGGAAHRAGLSAGDALVAIDGLRVTGSNLDALLARYRVGDKVEIH CCCCCCCCEEEEEEECCCCHHHCCCCCCCEEEEEECEEEECCCHHHHHHHHCCCCEEEEE AFRRDELRVAHLKLDGPDIARYKLTAQPKPAATRARRDAWLGLPAARGRR EEECCCEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA