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The map label for this gene is omp32 [H]

Identifier: 83719009

GI number: 83719009

Start: 1249912

End: 1251222

Strand: Reverse

Name: omp32 [H]

Synonym: BTH_I1107

Alternate gene names: 83719009

Gene position: 1251222-1249912 (Counterclockwise)

Preceding gene: 83720214

Following gene: 83720922

Centisome position: 32.85

GC content: 62.93

Gene sequence:

>1311_bases
ATGGAAGACGCGTGTACCGCTCTTTCTCTTTGTCCCAAAAAGCCCTTTTGCTACATTACGAGCGGCTTCATTCGAAGTTC
ACGCGGGTATCGCCATCAAAAACAACCATCGGCCCGCCACAATAAATTTGTCATCCTTGGAGATCTTTTAATGAAAAAGT
CGCTTCTCGCGCTCGTCGCGCTGAGCGCGTTTGCTGGCGCGGCTCACGCGCAAAGCAGCGTGACGCTGTACGGCATCATC
GACGAAGGCTTCAACATCAATACCAATGCAGGCGGCAAGCACCTGTACAACCTGTCGAGCGGCGTTTTGCAGGGTAGCCG
CTGGGGCCTGCGCGGCACGGAAGACCTGGGCGGCGGCCTGAAGGCACTGTTCGTCCTCGAAAACGGCTTCGACGTGAACT
CGGGCAAGCTGAATCAGGGCGGCCTCGAATTCGGCCGTCAGGCCTACGTCGGCCTGTCGAGCAGCTTCGGCACCGTCACG
CTCGGCCGTCAGTACGACTCCGTCGTCGACTTCGTCGGCCCGCTGGAAGCAGGCGACCAGTGGGGCGGCTACATCGCCGC
TCACCCGGGCGATCTCGACAACTTCAACAACGCGTATCGCGTGAACAACGCAGTCAAGTTCACGAGCGCGAACTACGGCG
GCTTCACGTTCGGCGGCCTGTACAGCTTCGGCGGCGTCGCCGGCGACTTCAGCCGCAACCAGACCTGGTCGCTCGGCGCA
GGCTACACGAACGGCCCGCTCGTGCTGGGCGTCGGCTACCTGAACGCGCGCACGCCGTCGACGGCCGGCGGCCTGTTCGG
CAACAACACGACGTCGAGCTCGCCGGCGGCCGTGACGACCCCGGTCTACGCAGGCTACGCATCGGCCCACACGTACCAGG
TGATCGGTGCGGGCGGCGCCTATTCGTTCGGCGCGGCGACGGTCGGCGTCACGTACTCGAACATCAAGTTCATGAACTTC
GCGAGCACGGTGTTCCCGAACCAGACCGCGACGTTCAACAACGCGGAAATCAACTTCAAGTATCAGCTGACCCCGACGCT
GCTCGCCGGCGCGGCGTATGACTACACGCAAGGCAGCAAGATCGCCGGCGCGTCCGCGGCCAAGTACCACCAAGGCTCGG
TTGGCGTCGACTACTTCCTGTCGAAGCGCACCGACGTCTACGCGATCGGCGTGTATCAGCACGCTTCGGGCAACGTGATC
GAAGCCGACGGCAACACGGTCGGCCCGGCAACCGCCGCGATCAACGGCCTGACGCCGTCGTCGAACCGCAACCAGTTCAC
CGCGCGCGTCGGCATCCGCCACAAGTTCTAA

Upstream 100 bases:

>100_bases
AGTAAGGAATTCGTAACAATTTTATTGCGGCTACCCACCACGGTAGCGCTCGGAAATAGCGGTTAACCCGTGATTTTAAC
CATTGTTGCGTAAAGGAAAC

Downstream 100 bases:

>100_bases
TAAGCGGGTAACACTCTGCAGTCGTTTAAAAGGCGCCTTCGGGCGCCTTTTTTATCGACCCGACGGCTGGTAAGGAACCG
CTCGGCTTGGAATCGGACGG

Product: outer membrane porin OpcP

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MEDACTALSLCPKKPFCYITSGFIRSSRGYRHQKQPSARHNKFVILGDLLMKKSLLALVALSAFAGAAHAQSSVTLYGII
DEGFNINTNAGGKHLYNLSSGVLQGSRWGLRGTEDLGGGLKALFVLENGFDVNSGKLNQGGLEFGRQAYVGLSSSFGTVT
LGRQYDSVVDFVGPLEAGDQWGGYIAAHPGDLDNFNNAYRVNNAVKFTSANYGGFTFGGLYSFGGVAGDFSRNQTWSLGA
GYTNGPLVLGVGYLNARTPSTAGGLFGNNTTSSSPAAVTTPVYAGYASAHTYQVIGAGGAYSFGAATVGVTYSNIKFMNF
ASTVFPNQTATFNNAEINFKYQLTPTLLAGAAYDYTQGSKIAGASAAKYHQGSVGVDYFLSKRTDVYAIGVYQHASGNVI
EADGNTVGPATAAINGLTPSSNRNQFTARVGIRHKF

Sequences:

>Translated_436_residues
MEDACTALSLCPKKPFCYITSGFIRSSRGYRHQKQPSARHNKFVILGDLLMKKSLLALVALSAFAGAAHAQSSVTLYGII
DEGFNINTNAGGKHLYNLSSGVLQGSRWGLRGTEDLGGGLKALFVLENGFDVNSGKLNQGGLEFGRQAYVGLSSSFGTVT
LGRQYDSVVDFVGPLEAGDQWGGYIAAHPGDLDNFNNAYRVNNAVKFTSANYGGFTFGGLYSFGGVAGDFSRNQTWSLGA
GYTNGPLVLGVGYLNARTPSTAGGLFGNNTTSSSPAAVTTPVYAGYASAHTYQVIGAGGAYSFGAATVGVTYSNIKFMNF
ASTVFPNQTATFNNAEINFKYQLTPTLLAGAAYDYTQGSKIAGASAAKYHQGSVGVDYFLSKRTDVYAIGVYQHASGNVI
EADGNTVGPATAAINGLTPSSNRNQFTARVGIRHKF
>Mature_436_residues
MEDACTALSLCPKKPFCYITSGFIRSSRGYRHQKQPSARHNKFVILGDLLMKKSLLALVALSAFAGAAHAQSSVTLYGII
DEGFNINTNAGGKHLYNLSSGVLQGSRWGLRGTEDLGGGLKALFVLENGFDVNSGKLNQGGLEFGRQAYVGLSSSFGTVT
LGRQYDSVVDFVGPLEAGDQWGGYIAAHPGDLDNFNNAYRVNNAVKFTSANYGGFTFGGLYSFGGVAGDFSRNQTWSLGA
GYTNGPLVLGVGYLNARTPSTAGGLFGNNTTSSSPAAVTTPVYAGYASAHTYQVIGAGGAYSFGAATVGVTYSNIKFMNF
ASTVFPNQTATFNNAEINFKYQLTPTLLAGAAYDYTQGSKIAGASAAKYHQGSVGVDYFLSKRTDVYAIGVYQHASGNVI
EADGNTVGPATAAINGLTPSSNRNQFTARVGIRHKF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 45854; Mature: 45854

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDACTALSLCPKKPFCYITSGFIRSSRGYRHQKQPSARHNKFVILGDLLMKKSLLALVA
CCCHHHHHHHCCCCCEEEEECCHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHH
LSAFAGAAHAQSSVTLYGIIDEGFNINTNAGGKHLYNLSSGVLQGSRWGLRGTEDLGGGL
HHHHHCCCCCCCCEEEEEEECCCEEECCCCCCCEEEECHHCCCCCCCCCCCCCHHHCCCE
KALFVLENGFDVNSGKLNQGGLEFGRQAYVGLSSSFGTVTLGRQYDSVVDFVGPLEAGDQ
EEEEEEECCCCCCCCCCCCCCHHHCCEEEEEECCCCCEEEECCCHHHHHHHHCCCCCCCC
WGGYIAAHPGDLDNFNNAYRVNNAVKFTSANYGGFTFGGLYSFGGVAGDFSRNQTWSLGA
CCCEEEECCCCCCCCCCEEEECCEEEEECCCCCCEEECHHHHCCCCCCCCCCCCEEEECC
GYTNGPLVLGVGYLNARTPSTAGGLFGNNTTSSSPAAVTTPVYAGYASAHTYQVIGAGGA
CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCCEEEEEEECCCC
YSFGAATVGVTYSNIKFMNFASTVFPNQTATFNNAEINFKYQLTPTLLAGAAYDYTQGSK
CCCCCEEEEEEECCEEEEEEHHHHCCCCCCCCCCCEEEEEEEECHHHEECCCCCCCCCCC
IAGASAAKYHQGSVGVDYFLSKRTDVYAIGVYQHASGNVIEADGNTVGPATAAINGLTPS
CCCCCCHHCCCCCCCHHHHCCCCCCEEEEEEEEECCCCEEECCCCCCCCHHHEEECCCCC
SNRNQFTARVGIRHKF
CCCCEEEEEEEEEECC
>Mature Secondary Structure
MEDACTALSLCPKKPFCYITSGFIRSSRGYRHQKQPSARHNKFVILGDLLMKKSLLALVA
CCCHHHHHHHCCCCCEEEEECCHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHH
LSAFAGAAHAQSSVTLYGIIDEGFNINTNAGGKHLYNLSSGVLQGSRWGLRGTEDLGGGL
HHHHHCCCCCCCCEEEEEEECCCEEECCCCCCCEEEECHHCCCCCCCCCCCCCHHHCCCE
KALFVLENGFDVNSGKLNQGGLEFGRQAYVGLSSSFGTVTLGRQYDSVVDFVGPLEAGDQ
EEEEEEECCCCCCCCCCCCCCHHHCCEEEEEECCCCCEEEECCCHHHHHHHHCCCCCCCC
WGGYIAAHPGDLDNFNNAYRVNNAVKFTSANYGGFTFGGLYSFGGVAGDFSRNQTWSLGA
CCCEEEECCCCCCCCCCEEEECCEEEEECCCCCCEEECHHHHCCCCCCCCCCCCEEEECC
GYTNGPLVLGVGYLNARTPSTAGGLFGNNTTSSSPAAVTTPVYAGYASAHTYQVIGAGGA
CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCCEEEEEEECCCC
YSFGAATVGVTYSNIKFMNFASTVFPNQTATFNNAEINFKYQLTPTLLAGAAYDYTQGSK
CCCCCEEEEEEECCEEEEEEHHHHCCCCCCCCCCCEEEEEEEECHHHEECCCCCCCCCCC
IAGASAAKYHQGSVGVDYFLSKRTDVYAIGVYQHASGNVIEADGNTVGPATAAINGLTPS
CCCCCCHHCCCCCCCHHHHCCCCCCEEEEEEEEECCCCEEECCCCCCCCHHHEEECCCCC
SNRNQFTARVGIRHKF
CCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]