Click here to switch to the map view.

The map label for this gene is tse [H]

Identifier: 83718995

GI number: 83718995

Start: 481033

End: 482571

Strand: Direct

Name: tse [H]

Synonym: BTH_I0438

Alternate gene names: 83718995

Gene position: 481033-482571 (Clockwise)

Preceding gene: 83720830

Following gene: 83718403

Centisome position: 12.63

GC content: 69.98

Gene sequence:

>1539_bases
ATGCTCGCCGAGCGCAAGGAAGGCATGGCGAATCTCGTCGATTCGGCGGCGGGCGTCGTGAAGGCGTACTACGCGCTCGC
GCAGAGCGGCAAGATGAGCGACGAGGATGCGCGCCGCGAAGCGCTCGAGCGCCTCGCGGCGATGCGCTACGGTGATTCCG
GCTACTTGTTCGTGATGGACTCGAAGCCCGTCGTGCTGATGCATCCGACGCTGCCCAAGCTCGTCGGCACGCAGGTCGGC
GATTATCTCGATCCGGACGGCAAGCGGCTTTTCGTCACGATCCTGAACGCGGCGAAGGAGAGCGGGCACGGCTTCGCCGA
ATATCGCGGGCGGCTGCCGCACAGCGAGACCGCGGTGCCGAAGATCAGCTACGTGACGCGCTTCGCGCCTTGGGACTGGA
ACATCTCGAGCGGCGTGTTCCTGAAGGACATCGATACCGTCTACTACGAGACGCTCGTCAGCCACCTCGCGGTGGTGTTC
GTGATCGGCCTCGTGATCACGGCGGCGATGCTCGTCATCATCCGCAACGTGCGCGCGAGCCTGGGCGGCGAGCCGGACGA
AGCGGCGTCGCTCGCCGCGCGGATCGCGGCGGGCGACCTGACGCGGCCCGTCGCGGTGCGCGCGGGCGACAGGACGAGCA
TGATGGCCGCGATGCGCGACATGCAGGGCCGCCTGCAGTCGACGATCGGCGGCATCCGCCGGGCGGCCGAATCGATCGCG
GCCGCGAGCCACGAGATCGCGTCGGGCAACCACGATCTGTCGCAGCGCACCGAGCAGCAGGCCGCGTCGCTCGAGGAGAC
CGCGGCGAGCATGGAAGAGCTGACGGCCACCGTCAAGCAGAACGCCGAGAACGCGCGGCAGGCGAGCGGGCTCGCGAACA
ACGCGTCCGAGATCGCGTTGAAGGGCAACGATGTCGTGAGCCGCGTGATCGGCACGATGGGCGAGATCAACGACAGCTCG
CAGAAGATTGCCGACATCATCGGCGTGATCGACGGCATCGCGTTCCAGACCAACATCCTCGCGCTGAACGCGGCCGTCGA
GGCGGCGCGCGCGGGCGAGCAGGGCCGCGGCTTCGCGGTCGTCGCGGGCGAGGTGCGCTCGCTCGCGCAGCGCAGCGCGA
CGGCGGCGAAGGAGATCAAGCAACTGATCGACGCGTCGGTGGAGCGCGTGAACAACGGCTCGGCGCTCGTCGGCCAGGCG
GGCGAGACGATGACCGAGATCCTGCAGGCGGTGCGGCGCGTGACCGACATCATGGGCGAGATCGCGGCCGCGTCCGAGGA
GCAGTCGAGCGGGATCTCGCAAGTCGGCCGCGCGGTCACGCAGATGGACGAAATGACGCAGCAGAACGCGGCGCTCGTCG
AGGAGGCGGCCGCCGCCGCGTCGTCGCTCCAGGAGCAGGCGGCGCGGCTGCGCGAATCGGTGAGCGCGTTCCAGGTCGGC
GACGGCGCGGCTGACGGCGGTACGGCGGCGGGCGCGGCGGCGAGCGGCGGCCCGAATGCGGCCGCTTCGTCCGGGCGCGT
CGAGCCGGCGCTCGCATGA

Upstream 100 bases:

>100_bases
CAGAATGAGCTTGAATCGCAAGCTGTGGCTGGCGCTTGCGCTCGTATGGGTCGGATTGCTGGGGGTAGGCGCGTGGAGCG
CGTTCGAGACGCGCACGACG

Downstream 100 bases:

>100_bases
CGCATTCCCATACCTATATGAGCGGGATGTATTTCACAGCCTTGCGATCTTGTGACACCATCTGCGCTTTCGTCAGCGCG
GCCCGGCCGGTCAGGCCGTC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 512

Protein sequence:

>512_residues
MLAERKEGMANLVDSAAGVVKAYYALAQSGKMSDEDARREALERLAAMRYGDSGYLFVMDSKPVVLMHPTLPKLVGTQVG
DYLDPDGKRLFVTILNAAKESGHGFAEYRGRLPHSETAVPKISYVTRFAPWDWNISSGVFLKDIDTVYYETLVSHLAVVF
VIGLVITAAMLVIIRNVRASLGGEPDEAASLAARIAAGDLTRPVAVRAGDRTSMMAAMRDMQGRLQSTIGGIRRAAESIA
AASHEIASGNHDLSQRTEQQAASLEETAASMEELTATVKQNAENARQASGLANNASEIALKGNDVVSRVIGTMGEINDSS
QKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSATAAKEIKQLIDASVERVNNGSALVGQA
GETMTEILQAVRRVTDIMGEIAAASEEQSSGISQVGRAVTQMDEMTQQNAALVEEAAAAASSLQEQAARLRESVSAFQVG
DGAADGGTAAGAAASGGPNAAASSGRVEPALA

Sequences:

>Translated_512_residues
MLAERKEGMANLVDSAAGVVKAYYALAQSGKMSDEDARREALERLAAMRYGDSGYLFVMDSKPVVLMHPTLPKLVGTQVG
DYLDPDGKRLFVTILNAAKESGHGFAEYRGRLPHSETAVPKISYVTRFAPWDWNISSGVFLKDIDTVYYETLVSHLAVVF
VIGLVITAAMLVIIRNVRASLGGEPDEAASLAARIAAGDLTRPVAVRAGDRTSMMAAMRDMQGRLQSTIGGIRRAAESIA
AASHEIASGNHDLSQRTEQQAASLEETAASMEELTATVKQNAENARQASGLANNASEIALKGNDVVSRVIGTMGEINDSS
QKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSATAAKEIKQLIDASVERVNNGSALVGQA
GETMTEILQAVRRVTDIMGEIAAASEEQSSGISQVGRAVTQMDEMTQQNAALVEEAAAAASSLQEQAARLRESVSAFQVG
DGAADGGTAAGAAASGGPNAAASSGRVEPALA
>Mature_512_residues
MLAERKEGMANLVDSAAGVVKAYYALAQSGKMSDEDARREALERLAAMRYGDSGYLFVMDSKPVVLMHPTLPKLVGTQVG
DYLDPDGKRLFVTILNAAKESGHGFAEYRGRLPHSETAVPKISYVTRFAPWDWNISSGVFLKDIDTVYYETLVSHLAVVF
VIGLVITAAMLVIIRNVRASLGGEPDEAASLAARIAAGDLTRPVAVRAGDRTSMMAAMRDMQGRLQSTIGGIRRAAESIA
AASHEIASGNHDLSQRTEQQAASLEETAASMEELTATVKQNAENARQASGLANNASEIALKGNDVVSRVIGTMGEINDSS
QKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSATAAKEIKQLIDASVERVNNGSALVGQA
GETMTEILQAVRRVTDIMGEIAAASEEQSSGISQVGRAVTQMDEMTQQNAALVEEAAAAASSLQEQAARLRESVSAFQVG
DGAADGGTAAGAAASGGPNAAASSGRVEPALA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=319, Percent_Identity=62.6959247648903, Blast_Score=331, Evalue=6e-92,
Organism=Escherichia coli, GI1788194, Length=404, Percent_Identity=49.5049504950495, Blast_Score=317, Evalue=1e-87,
Organism=Escherichia coli, GI1788195, Length=307, Percent_Identity=61.5635179153095, Blast_Score=313, Evalue=1e-86,
Organism=Escherichia coli, GI1787690, Length=323, Percent_Identity=55.7275541795666, Blast_Score=299, Evalue=3e-82,
Organism=Escherichia coli, GI1789453, Length=250, Percent_Identity=45.2, Blast_Score=212, Evalue=6e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 53475; Mature: 53475

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAERKEGMANLVDSAAGVVKAYYALAQSGKMSDEDARREALERLAAMRYGDSGYLFVMD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEC
SKPVVLMHPTLPKLVGTQVGDYLDPDGKRLFVTILNAAKESGHGFAEYRGRLPHSETAVP
CCCEEEECCCHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCCHHHHCCCCCCCCCCCC
KISYVTRFAPWDWNISSGVFLKDIDTVYYETLVSHLAVVFVIGLVITAAMLVIIRNVRAS
HHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGEPDEAASLAARIAAGDLTRPVAVRAGDRTSMMAAMRDMQGRLQSTIGGIRRAAESIA
HCCCCHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AASHEIASGNHDLSQRTEQQAASLEETAASMEELTATVKQNAENARQASGLANNASEIAL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
KGNDVVSRVIGTMGEINDSSQKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAV
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
VAGEVRSLAQRSATAAKEIKQLIDASVERVNNGSALVGQAGETMTEILQAVRRVTDIMGE
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHH
IAAASEEQSSGISQVGRAVTQMDEMTQQNAALVEEAAAAASSLQEQAARLRESVSAFQVG
HHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DGAADGGTAAGAAASGGPNAAASSGRVEPALA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLAERKEGMANLVDSAAGVVKAYYALAQSGKMSDEDARREALERLAAMRYGDSGYLFVMD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEC
SKPVVLMHPTLPKLVGTQVGDYLDPDGKRLFVTILNAAKESGHGFAEYRGRLPHSETAVP
CCCEEEECCCHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCCHHHHCCCCCCCCCCCC
KISYVTRFAPWDWNISSGVFLKDIDTVYYETLVSHLAVVFVIGLVITAAMLVIIRNVRAS
HHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGEPDEAASLAARIAAGDLTRPVAVRAGDRTSMMAAMRDMQGRLQSTIGGIRRAAESIA
HCCCCHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AASHEIASGNHDLSQRTEQQAASLEETAASMEELTATVKQNAENARQASGLANNASEIAL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
KGNDVVSRVIGTMGEINDSSQKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAV
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
VAGEVRSLAQRSATAAKEIKQLIDASVERVNNGSALVGQAGETMTEILQAVRRVTDIMGE
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHH
IAAASEEQSSGISQVGRAVTQMDEMTQQNAALVEEAAAAASSLQEQAARLRESVSAFQVG
HHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DGAADGGTAAGAAASGGPNAAASSGRVEPALA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]