| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83718992
Identifier: 83718992
GI number: 83718992
Start: 3594866
End: 3595522
Strand: Direct
Name: 83718992
Synonym: BTH_I3152
Alternate gene names: NA
Gene position: 3594866-3595522 (Clockwise)
Preceding gene: 83720137
Following gene: 83719926
Centisome position: 94.37
GC content: 67.43
Gene sequence:
>657_bases ATGAGCGCTGCGCCGACCATGCCGAGCCGCGAAATCTATGTGAGCACCGACGTCGAGGCGGACGGCCCGATCCCGGGCCC GCATTCGATGCTGAGCTTCGCGTCCGCCGCATTTACCGAGGACAAGCGGCTGATCGCGACCTTCTCCGCGAATCTCGAGC TGCTGCCGGGCGCGGCGGCGCACCCGGTGCAGGCTGCGTGGTGGAAGACGCAGCCCGAGGCGTGGGCCGCATGCCGGCGC GATTTGCAGGCGCCGGAGGCGGCGCTCGTCGCGTACGTCGAATGGGTCGAGGCGCTGCCCGGCAAGCCCGTGTTCGTCGC GATGCCGGCGGGCTTCGATTTCACGTTCATGTTCTGGTACATGATGCGCTTCGCCGGGCGCTGCCCGTTCTCGTGGTCGG CGCTCGACATCAAGACGCTCGCATTCGCGATCACCGGCCTGCCGTACCGGAAGGCGATCAAGCCGCGCTTCCCGAGGCAC TGGTTCGACGACCATCCACACACACACGTCGCGCTCGACGACGCGATCGAGCAAGGCGCGCTCTTTTGCAACATGCTCGC CGACCTGCGCGCGCTGCAGACGGCGAGGGCGCCGGCGCCGTCCGTCGAAGAAGCTGACGAATCAGCACAAAATGCCGCCG ACGGCCCGAGAAATTAG
Upstream 100 bases:
>100_bases CGCTCGGCGACGACGTCACGTTCGTGCCCGGCCACGGCCCGGTGTCGACGTTCGGCGACGAGCGCCGCACGAATCCGTTC GTCGCAGACGGGGTGGCGGG
Downstream 100 bases:
>100_bases CGAATATCGCTCATTTCAGCGCCATCAGATTGCCTTTCCTTCCACCCGCCTCTACCATTGCCACATGTTGTAGCCGCTTT GGAGGCGCAGGTGACCCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Exonuclease RNAse T And DNA Polymerase III
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MSAAPTMPSREIYVSTDVEADGPIPGPHSMLSFASAAFTEDKRLIATFSANLELLPGAAAHPVQAAWWKTQPEAWAACRR DLQAPEAALVAYVEWVEALPGKPVFVAMPAGFDFTFMFWYMMRFAGRCPFSWSALDIKTLAFAITGLPYRKAIKPRFPRH WFDDHPHTHVALDDAIEQGALFCNMLADLRALQTARAPAPSVEEADESAQNAADGPRN
Sequences:
>Translated_218_residues MSAAPTMPSREIYVSTDVEADGPIPGPHSMLSFASAAFTEDKRLIATFSANLELLPGAAAHPVQAAWWKTQPEAWAACRR DLQAPEAALVAYVEWVEALPGKPVFVAMPAGFDFTFMFWYMMRFAGRCPFSWSALDIKTLAFAITGLPYRKAIKPRFPRH WFDDHPHTHVALDDAIEQGALFCNMLADLRALQTARAPAPSVEEADESAQNAADGPRN >Mature_217_residues SAAPTMPSREIYVSTDVEADGPIPGPHSMLSFASAAFTEDKRLIATFSANLELLPGAAAHPVQAAWWKTQPEAWAACRRD LQAPEAALVAYVEWVEALPGKPVFVAMPAGFDFTFMFWYMMRFAGRCPFSWSALDIKTLAFAITGLPYRKAIKPRFPRHW FDDHPHTHVALDDAIEQGALFCNMLADLRALQTARAPAPSVEEADESAQNAADGPRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23992; Mature: 23861
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAPTMPSREIYVSTDVEADGPIPGPHSMLSFASAAFTEDKRLIATFSANLELLPGAAA CCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCEECCCCCC HPVQAAWWKTQPEAWAACRRDLQAPEAALVAYVEWVEALPGKPVFVAMPAGFDFTFMFWY CCCHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHH MMRFAGRCPFSWSALDIKTLAFAITGLPYRKAIKPRFPRHWFDDHPHTHVALDDAIEQGA HHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHH LFCNMLADLRALQTARAPAPSVEEADESAQNAADGPRN HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure SAAPTMPSREIYVSTDVEADGPIPGPHSMLSFASAAFTEDKRLIATFSANLELLPGAAA CCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCEECCCCCC HPVQAAWWKTQPEAWAACRRDLQAPEAALVAYVEWVEALPGKPVFVAMPAGFDFTFMFWY CCCHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHH MMRFAGRCPFSWSALDIKTLAFAITGLPYRKAIKPRFPRHWFDDHPHTHVALDDAIEQGA HHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHH LFCNMLADLRALQTARAPAPSVEEADESAQNAADGPRN HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA