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The map label for this gene is dppC [H]

Identifier: 83718966

GI number: 83718966

Start: 255450

End: 256367

Strand: Direct

Name: dppC [H]

Synonym: BTH_I0222

Alternate gene names: 83718966

Gene position: 255450-256367 (Clockwise)

Preceding gene: 83720330

Following gene: 83721251

Centisome position: 6.71

GC content: 69.61

Gene sequence:

>918_bases
ATGAGCAACATGCAAAACACCATGCCGTCGCAGGCGGCGCCCGTGAGCGGCCGCGTGCTCGCGCTGCGCGAATTCTGGGC
GAATTTCTCCCGTAATCGCGGCGCGGTGGGCGCCGGCGTCGTCGTGCTCGTGCTGGTCGCGGTCGCGCTCTTCGCGCCGT
TGCTCGCGCCGCACAGCCCGATCGAGCAGTACCGCGACTCCGTGAAGATCCCGCCCGCGTGGCTCGCGGGCGGCAACTGG
CAATTCGTGCTCGGCACCGACGAAGCGGGCCGCGACATCCTCTCGCGCCTGATGTACGGCGCGCGGATGTCGTTCTGGAT
CGGCTTCGTGTCGGTCGTGCTCGCGCTGATTCCCGGCGTCGTGCTCGGGCTGGTCGCCGCGTTCTTCCAGAAGTGGGCCG
ACACGCCCGTGATGCGCGTGATGGACGTGCTGCTCGCGCTGCCGTCGCTGCTGCTCGCGGTCGCGGTCGTCGCGATCATC
GGCCCGGGCCTCACCAACACGATGTTCGCGATCGCGATCGTCGCGCTGCCCGCGTACGTGCGCCTCACGCGCGCGTCGGC
GCTCGGCGAGCTGCAGAAGGAGTACGTGACGGCGTCGCGCGTCGCGGGCGCGGGCACGCTGCGGCTGATGTTCTCGCAGG
TGCTGCCGAACTGCACGGCGCCGCTCATCGTGCAGGCGACGCTCGGCTTCTCGTCGGCGATCCTCGATGCGGCGGCGCTC
GGCTTTCTCGGCCTTGGCGTGCAGCCGCCGACGGCCGAGTGGGGCGCGATGCTCGCATCGGCGCGCGACTACATCGACAA
CGCATGGTGGATCGTCACGATGCCGGGCCTGTCGATCCTGATCTCGGTGCTCGCGATCAACCTGCTCGGCGACGGGCTGC
GCGACGCGCTCGATCCCAAACTCAAACGGATGGCCTGA

Upstream 100 bases:

>100_bases
AATCGAACATGCATCCCCACACTCGTATCCATTCGCTGCGCCGGCGCTCGCGCGCCGCCGCGGCATTCGAGCGCGCATGC
GCGGCCACGCGGGAGGCGCG

Downstream 100 bases:

>100_bases
CATGAGCGATTTATTGACCATCCGCAATCTCGCGGTGAACTTCAACGGGCTGCCCGCGGTCGACAGGATCAACCTGTCCG
TCGCGCGCGGCGAAGTGGTC

Product: dipeptide transport system permease

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSNMQNTMPSQAAPVSGRVLALREFWANFSRNRGAVGAGVVVLVLVAVALFAPLLAPHSPIEQYRDSVKIPPAWLAGGNW
QFVLGTDEAGRDILSRLMYGARMSFWIGFVSVVLALIPGVVLGLVAAFFQKWADTPVMRVMDVLLALPSLLLAVAVVAII
GPGLTNTMFAIAIVALPAYVRLTRASALGELQKEYVTASRVAGAGTLRLMFSQVLPNCTAPLIVQATLGFSSAILDAAAL
GFLGLGVQPPTAEWGAMLASARDYIDNAWWIVTMPGLSILISVLAINLLGDGLRDALDPKLKRMA

Sequences:

>Translated_305_residues
MSNMQNTMPSQAAPVSGRVLALREFWANFSRNRGAVGAGVVVLVLVAVALFAPLLAPHSPIEQYRDSVKIPPAWLAGGNW
QFVLGTDEAGRDILSRLMYGARMSFWIGFVSVVLALIPGVVLGLVAAFFQKWADTPVMRVMDVLLALPSLLLAVAVVAII
GPGLTNTMFAIAIVALPAYVRLTRASALGELQKEYVTASRVAGAGTLRLMFSQVLPNCTAPLIVQATLGFSSAILDAAAL
GFLGLGVQPPTAEWGAMLASARDYIDNAWWIVTMPGLSILISVLAINLLGDGLRDALDPKLKRMA
>Mature_304_residues
SNMQNTMPSQAAPVSGRVLALREFWANFSRNRGAVGAGVVVLVLVAVALFAPLLAPHSPIEQYRDSVKIPPAWLAGGNWQ
FVLGTDEAGRDILSRLMYGARMSFWIGFVSVVLALIPGVVLGLVAAFFQKWADTPVMRVMDVLLALPSLLLAVAVVAIIG
PGLTNTMFAIAIVALPAYVRLTRASALGELQKEYVTASRVAGAGTLRLMFSQVLPNCTAPLIVQATLGFSSAILDAAALG
FLGLGVQPPTAEWGAMLASARDYIDNAWWIVTMPGLSILISVLAINLLGDGLRDALDPKLKRMA

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789964, Length=282, Percent_Identity=59.9290780141844, Blast_Score=304, Evalue=5e-84,
Organism=Escherichia coli, GI1787054, Length=280, Percent_Identity=41.7857142857143, Blast_Score=218, Evalue=3e-58,
Organism=Escherichia coli, GI1787760, Length=265, Percent_Identity=43.7735849056604, Blast_Score=214, Evalue=4e-57,
Organism=Escherichia coli, GI1787549, Length=293, Percent_Identity=43.0034129692833, Blast_Score=201, Evalue=5e-53,
Organism=Escherichia coli, GI1789889, Length=221, Percent_Identity=41.6289592760181, Blast_Score=151, Evalue=6e-38,
Organism=Escherichia coli, GI1787498, Length=296, Percent_Identity=30.4054054054054, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1788505, Length=226, Percent_Identity=26.5486725663717, Blast_Score=81, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32381; Mature: 32250

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNMQNTMPSQAAPVSGRVLALREFWANFSRNRGAVGAGVVVLVLVAVALFAPLLAPHSP
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH
IEQYRDSVKIPPAWLAGGNWQFVLGTDEAGRDILSRLMYGARMSFWIGFVSVVLALIPGV
HHHHHHCCCCCCCEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGLVAAFFQKWADTPVMRVMDVLLALPSLLLAVAVVAIIGPGLTNTMFAIAIVALPAYV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RLTRASALGELQKEYVTASRVAGAGTLRLMFSQVLPNCTAPLIVQATLGFSSAILDAAAL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHH
GFLGLGVQPPTAEWGAMLASARDYIDNAWWIVTMPGLSILISVLAINLLGDGLRDALDPK
HHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCHH
LKRMA
HHHCC
>Mature Secondary Structure 
SNMQNTMPSQAAPVSGRVLALREFWANFSRNRGAVGAGVVVLVLVAVALFAPLLAPHSP
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH
IEQYRDSVKIPPAWLAGGNWQFVLGTDEAGRDILSRLMYGARMSFWIGFVSVVLALIPGV
HHHHHHCCCCCCCEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGLVAAFFQKWADTPVMRVMDVLLALPSLLLAVAVVAIIGPGLTNTMFAIAIVALPAYV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RLTRASALGELQKEYVTASRVAGAGTLRLMFSQVLPNCTAPLIVQATLGFSSAILDAAAL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHH
GFLGLGVQPPTAEWGAMLASARDYIDNAWWIVTMPGLSILISVLAINLLGDGLRDALDPK
HHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCHH
LKRMA
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8550458 [H]