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The map label for this gene is gph-1 [C]

Identifier: 83718948

GI number: 83718948

Start: 1835171

End: 1835896

Strand: Reverse

Name: gph-1 [C]

Synonym: BTH_I1629

Alternate gene names: 83718948

Gene position: 1835896-1835171 (Counterclockwise)

Preceding gene: 83719855

Following gene: 83718418

Centisome position: 48.2

GC content: 71.35

Gene sequence:

>726_bases
ATGAGCTCTTCGTCGCCCTCCTTCGCCGCCTCGCAGTCCGGCGCGCCGCGCCTCGAAGCGTGCGAGGCCGTGCTGTTCGA
TCTCGACGGCACGCTCGCCGATACGGCGCCCGACCTCGCGGCCGCGGTCAACAAGATGCAGCGCTCGCGCGGGGCCGCCC
CAACGCCCCTCGATGCGCTGCGCCCGCTCGCGTCGGCCGGCGCCCGGGGGCTCATCGGCGGCGCGTTCGGCATCGTGCCC
GCGGATGCGGAATTCGATGCGCTGCGCGACGAATTCCTCGCCAACTACGCGACCGACCTGTGTGTGCACACGACGCTCTT
TCCGGGCATCGGCGCGCTGCTGGACGACCTGGACGCGCGCGGCGTGCGCTGGGGCATCGTGACCAACAAGGCCGCGCGCT
TCACCGACCCGCTCGTCGCACTGCTCGGCCTCGCGGCGCGCGCGGCATGCGTGGTCAGCGGCGACACGGCGTCGCACCCG
AAACCGCATCCGGCCCCGCTGCTGCATGCCGCGCAGAGCCTGTCGCTCGCGCCCGAGCGGATCGTGTATGTCGGCGACGA
TTTGCGCGACATCCAGGCGGGCAGCGCCGCCGGCATGCCGACGGTTGCGGCCGCATACGGCTATTGCGGCGACGGCGTCG
CGCCCGCCGATTGGCAGGCGCAGCATCTCGTCGAAACGACGGACGACCTGCAGCGACTATTGCGCGTGTTGCGCTATAAT
GATTGA

Upstream 100 bases:

>100_bases
CCGCTCGCAAAGCGCTTCGCGCTGTCGAACGATACCGACGTCAACTATCTCGTCGCATGCCGCCGCAGCGTCTGACCCGC
CACTTGCACCGATCGCATTC

Downstream 100 bases:

>100_bases
TCCGCTGGGGGCGACCTGGTTTCGACAGGGGTTGTGAAGCGGCTAGGGCATGTCGAGGACCCGTCACCTCGTTAATCAAT
GGGAAAAACGTAACTGCAAA

Product: phosphoglycolate phosphatase

Products: NA

Alternate protein names: PGP; PGPase [H]

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MSSSSPSFAASQSGAPRLEACEAVLFDLDGTLADTAPDLAAAVNKMQRSRGAAPTPLDALRPLASAGARGLIGGAFGIVP
ADAEFDALRDEFLANYATDLCVHTTLFPGIGALLDDLDARGVRWGIVTNKAARFTDPLVALLGLAARAACVVSGDTASHP
KPHPAPLLHAAQSLSLAPERIVYVGDDLRDIQAGSAAGMPTVAAAYGYCGDGVAPADWQAQHLVETTDDLQRLLRVLRYN
D

Sequences:

>Translated_241_residues
MSSSSPSFAASQSGAPRLEACEAVLFDLDGTLADTAPDLAAAVNKMQRSRGAAPTPLDALRPLASAGARGLIGGAFGIVP
ADAEFDALRDEFLANYATDLCVHTTLFPGIGALLDDLDARGVRWGIVTNKAARFTDPLVALLGLAARAACVVSGDTASHP
KPHPAPLLHAAQSLSLAPERIVYVGDDLRDIQAGSAAGMPTVAAAYGYCGDGVAPADWQAQHLVETTDDLQRLLRVLRYN
D
>Mature_240_residues
SSSSPSFAASQSGAPRLEACEAVLFDLDGTLADTAPDLAAAVNKMQRSRGAAPTPLDALRPLASAGARGLIGGAFGIVPA
DAEFDALRDEFLANYATDLCVHTTLFPGIGALLDDLDARGVRWGIVTNKAARFTDPLVALLGLAARAACVVSGDTASHPK
PHPAPLLHAAQSLSLAPERIVYVGDDLRDIQAGSAAGMPTVAAAYGYCGDGVAPADWQAQHLVETTDDLQRLLRVLRYND

Specific function: Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stres

COG id: COG0546

COG function: function code R; Predicted phosphatases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1789787, Length=212, Percent_Identity=34.4339622641509, Blast_Score=108, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR005833
- InterPro:   IPR006346
- InterPro:   IPR023198 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: =3.1.3.18 [H]

Molecular weight: Translated: 25002; Mature: 24871

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSSPSFAASQSGAPRLEACEAVLFDLDGTLADTAPDLAAAVNKMQRSRGAAPTPLDAL
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCCCCHHHH
RPLASAGARGLIGGAFGIVPADAEFDALRDEFLANYATDLCVHTTLFPGIGALLDDLDAR
HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GVRWGIVTNKAARFTDPLVALLGLAARAACVVSGDTASHPKPHPAPLLHAAQSLSLAPER
CEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHCCCCCE
IVYVGDDLRDIQAGSAAGMPTVAAAYGYCGDGVAPADWQAQHLVETTDDLQRLLRVLRYN
EEEECCCHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
D
C
>Mature Secondary Structure 
SSSSPSFAASQSGAPRLEACEAVLFDLDGTLADTAPDLAAAVNKMQRSRGAAPTPLDAL
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCCCCHHHH
RPLASAGARGLIGGAFGIVPADAEFDALRDEFLANYATDLCVHTTLFPGIGALLDDLDAR
HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GVRWGIVTNKAARFTDPLVALLGLAARAACVVSGDTASHPKPHPAPLLHAAQSLSLAPER
CEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHCCCCCE
IVYVGDDLRDIQAGSAAGMPTVAAAYGYCGDGVAPADWQAQHLVETTDDLQRLLRVLRYN
EEEECCCHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA