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The map label for this gene is yngJ [H]

Identifier: 83718895

GI number: 83718895

Start: 1224063

End: 1225289

Strand: Reverse

Name: yngJ [H]

Synonym: BTH_I1083

Alternate gene names: 83718895

Gene position: 1225289-1224063 (Counterclockwise)

Preceding gene: 83721652

Following gene: 83721512

Centisome position: 32.17

GC content: 67.48

Gene sequence:

>1227_bases
ATGCATTTCGATTACGCCCCGAAAGTCGAAGCGTTGCGCGCACGGCTCAACGCGTTCTTCGACGAGCACATCTATCCGAA
CGAGCGCGCGTTCCATGAAGAAATCGCGCTCAACCGGCGCGCCGGCAACGCATGGCAGCCGGTCGCACTGATCGAGACGC
TGAAGGCGAAAGCGCGCGCCGCGGGCCTGTGGAACCTGTTTTTGCCCGATTCGACGCGCGGCGCCGGCCTCACGAATCTC
GAATACGCGCCGCTTTGCGAAATCATGGGCCGCGTGCCGTGGGCACCCGAGGTCTTCAACTGCAATGCGCCCGATACCGG
CAACATGGAAACGCTCGAGCGCTACGGCACCGATGCGCACAAGGCGACGTGGCTCGAGCCGCTGCTCGACGGCGCGATCC
GCTCGGCGTTCCTGATGACGGAGCCCGAAGTCGCGTCGTCGGATGCGACGAATATCCGCACGCGCATCGAACGCGACGGC
GAGCACTACGTGATCAACGGCCACAAGTGGTGGTCGTCCGGCGCGGGCGACCCGCGCTGCAAGCTCTACATCGTGATGGG
CAAGACGAACCCCGATGCGCCCCGCCACGCGCAGCAGTCGATGATTCTCGTGCCGTCGGACGCGCCCGGCATCACCGTGC
GCCGGCCGCTGAACGTATTCGGCTACGACGACGCACCGCACGGCCACATGGAGATCACGCTCGAGAACGTGCGCGTGCCC
GCGTCGAATCTGCTGCTCGGCGAAGGGCGCGGCTTCGAGATCGCGCAAGGCCGGCTCGGACCGGGCCGCATCCATCACTG
CATGCGGCTCGTCGGGCTCGCGGAGCGCGCGCTCGAGCTGATGTGCCGGCGCGCGTCGGAGCGCGTCGCGTTCGGCAAGC
CGGTCGCCGCGCAGACAGTCACGCAGGAGCGGATTGCCGAGGCGCGCTGCATGATCGAGCAGGCGCGGCTCCTCACGCTG
AAGACCGCTTATATGATGGACACCGTCGGCAACAAGGGGGCGCGCGGCGAGATCGCGATGATCAAGGTGGTCGCGCCGAA
CATGGCGTGCCAGGTGATCGACTGGGCGATCCAGGCGCACGGCGGCGGCGGCGTCAGCGACGACTTCCCGCTCGCCTATG
CGTACGCGAGCGCACGAACGCTACGCTTCGCGGACGGGCCGGATGAGGTCCACCGCAACGCGATCGCGAAACTCGAGCTC
GCACGCCACGCGCCGTCGCCGGCCTGA

Upstream 100 bases:

>100_bases
CCGCGCGCGGCCGATGGCCGAGCTCGCGTGGCGCTACGCACAGCACGCGCGCTAGCCGCGCGCCCTCCTTTCACCGAACC
GATCGATCAGCGAGGCAGCC

Downstream 100 bases:

>100_bases
CACGCGCGCCGCGCGGCGAAACGAGAAACCGGCGGGCGACGGCGCGCGGCCCGCCGCCCGCCGTCCCGTTTGTCTCATTC
GCACTGCAACACACCGCGCT

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MHFDYAPKVEALRARLNAFFDEHIYPNERAFHEEIALNRRAGNAWQPVALIETLKAKARAAGLWNLFLPDSTRGAGLTNL
EYAPLCEIMGRVPWAPEVFNCNAPDTGNMETLERYGTDAHKATWLEPLLDGAIRSAFLMTEPEVASSDATNIRTRIERDG
EHYVINGHKWWSSGAGDPRCKLYIVMGKTNPDAPRHAQQSMILVPSDAPGITVRRPLNVFGYDDAPHGHMEITLENVRVP
ASNLLLGEGRGFEIAQGRLGPGRIHHCMRLVGLAERALELMCRRASERVAFGKPVAAQTVTQERIAEARCMIEQARLLTL
KTAYMMDTVGNKGARGEIAMIKVVAPNMACQVIDWAIQAHGGGGVSDDFPLAYAYASARTLRFADGPDEVHRNAIAKLEL
ARHAPSPA

Sequences:

>Translated_408_residues
MHFDYAPKVEALRARLNAFFDEHIYPNERAFHEEIALNRRAGNAWQPVALIETLKAKARAAGLWNLFLPDSTRGAGLTNL
EYAPLCEIMGRVPWAPEVFNCNAPDTGNMETLERYGTDAHKATWLEPLLDGAIRSAFLMTEPEVASSDATNIRTRIERDG
EHYVINGHKWWSSGAGDPRCKLYIVMGKTNPDAPRHAQQSMILVPSDAPGITVRRPLNVFGYDDAPHGHMEITLENVRVP
ASNLLLGEGRGFEIAQGRLGPGRIHHCMRLVGLAERALELMCRRASERVAFGKPVAAQTVTQERIAEARCMIEQARLLTL
KTAYMMDTVGNKGARGEIAMIKVVAPNMACQVIDWAIQAHGGGGVSDDFPLAYAYASARTLRFADGPDEVHRNAIAKLEL
ARHAPSPA
>Mature_408_residues
MHFDYAPKVEALRARLNAFFDEHIYPNERAFHEEIALNRRAGNAWQPVALIETLKAKARAAGLWNLFLPDSTRGAGLTNL
EYAPLCEIMGRVPWAPEVFNCNAPDTGNMETLERYGTDAHKATWLEPLLDGAIRSAFLMTEPEVASSDATNIRTRIERDG
EHYVINGHKWWSSGAGDPRCKLYIVMGKTNPDAPRHAQQSMILVPSDAPGITVRRPLNVFGYDDAPHGHMEITLENVRVP
ASNLLLGEGRGFEIAQGRLGPGRIHHCMRLVGLAERALELMCRRASERVAFGKPVAAQTVTQERIAEARCMIEQARLLTL
KTAYMMDTVGNKGARGEIAMIKVVAPNMACQVIDWAIQAHGGGGVSDDFPLAYAYASARTLRFADGPDEVHRNAIAKLEL
ARHAPSPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI211971008, Length=400, Percent_Identity=59.5, Blast_Score=479, Evalue=1e-135,
Organism=Homo sapiens, GI48976061, Length=400, Percent_Identity=59.5, Blast_Score=479, Evalue=1e-135,
Organism=Homo sapiens, GI38505218, Length=404, Percent_Identity=55.9405940594059, Blast_Score=461, Evalue=1e-130,
Organism=Homo sapiens, GI4501859, Length=336, Percent_Identity=29.7619047619048, Blast_Score=139, Evalue=5e-33,
Organism=Homo sapiens, GI21361497, Length=385, Percent_Identity=28.5714285714286, Blast_Score=138, Evalue=8e-33,
Organism=Homo sapiens, GI187960098, Length=413, Percent_Identity=26.3922518159806, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI4557231, Length=413, Percent_Identity=26.3922518159806, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI4557233, Length=335, Percent_Identity=29.5522388059701, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI7656849, Length=343, Percent_Identity=25.6559766763848, Blast_Score=113, Evalue=3e-25,
Organism=Homo sapiens, GI76496475, Length=400, Percent_Identity=28, Blast_Score=109, Evalue=5e-24,
Organism=Homo sapiens, GI4557235, Length=400, Percent_Identity=28, Blast_Score=109, Evalue=6e-24,
Organism=Homo sapiens, GI226958412, Length=390, Percent_Identity=25.3846153846154, Blast_Score=106, Evalue=3e-23,
Organism=Homo sapiens, GI226958414, Length=337, Percent_Identity=26.1127596439169, Blast_Score=105, Evalue=8e-23,
Organism=Homo sapiens, GI4501857, Length=405, Percent_Identity=25.4320987654321, Blast_Score=102, Evalue=9e-22,
Organism=Escherichia coli, GI87081958, Length=306, Percent_Identity=29.7385620915033, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1786223, Length=268, Percent_Identity=25.7462686567164, Blast_Score=74, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17562446, Length=356, Percent_Identity=55.6179775280899, Blast_Score=405, Evalue=1e-113,
Organism=Caenorhabditis elegans, GI17534899, Length=405, Percent_Identity=27.1604938271605, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI17569725, Length=410, Percent_Identity=26.8292682926829, Blast_Score=135, Evalue=5e-32,
Organism=Caenorhabditis elegans, GI17570075, Length=357, Percent_Identity=27.7310924369748, Blast_Score=122, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI71985184, Length=354, Percent_Identity=30.225988700565, Blast_Score=122, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI17533517, Length=350, Percent_Identity=27.1428571428571, Blast_Score=111, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI17506239, Length=284, Percent_Identity=29.5774647887324, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17508101, Length=409, Percent_Identity=25.6723716381418, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17551932, Length=294, Percent_Identity=28.5714285714286, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17538396, Length=389, Percent_Identity=22.879177377892, Blast_Score=101, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI17505929, Length=351, Percent_Identity=25.9259259259259, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71985192, Length=282, Percent_Identity=28.3687943262411, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71990804, Length=264, Percent_Identity=25.7575757575758, Blast_Score=82, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI32563615, Length=179, Percent_Identity=27.9329608938547, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI71982178, Length=285, Percent_Identity=23.859649122807, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24660351, Length=285, Percent_Identity=32.9824561403509, Blast_Score=138, Evalue=6e-33,
Organism=Drosophila melanogaster, GI21356377, Length=345, Percent_Identity=29.8550724637681, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI281363737, Length=396, Percent_Identity=27.2727272727273, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24646207, Length=336, Percent_Identity=29.7619047619048, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24666513, Length=342, Percent_Identity=28.6549707602339, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI21355753, Length=290, Percent_Identity=25.5172413793103, Blast_Score=84, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44990; Mature: 44990

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFDYAPKVEALRARLNAFFDEHIYPNERAFHEEIALNRRAGNAWQPVALIETLKAKARA
CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
AGLWNLFLPDSTRGAGLTNLEYAPLCEIMGRVPWAPEVFNCNAPDTGNMETLERYGTDAH
CCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHCCCHH
KATWLEPLLDGAIRSAFLMTEPEVASSDATNIRTRIERDGEHYVINGHKWWSSGAGDPRC
HHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHCCCCCEEEEECEEEECCCCCCCCE
KLYIVMGKTNPDAPRHAQQSMILVPSDAPGITVRRPLNVFGYDDAPHGHMEITLENVRVP
EEEEEEECCCCCCCCHHCCCEEEEECCCCCEEEECCCEEECCCCCCCCEEEEEEECEECC
ASNLLLGEGRGFEIAQGRLGPGRIHHCMRLVGLAERALELMCRRASERVAFGKPVAAQTV
HHHEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
TQERIAEARCMIEQARLLTLKTAYMMDTVGNKGARGEIAMIKVVAPNMACQVIDWAIQAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHEEEHEEEC
GGGGVSDDFPLAYAYASARTLRFADGPDEVHRNAIAKLELARHAPSPA
CCCCCCCCCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MHFDYAPKVEALRARLNAFFDEHIYPNERAFHEEIALNRRAGNAWQPVALIETLKAKARA
CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
AGLWNLFLPDSTRGAGLTNLEYAPLCEIMGRVPWAPEVFNCNAPDTGNMETLERYGTDAH
CCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHCCCHH
KATWLEPLLDGAIRSAFLMTEPEVASSDATNIRTRIERDGEHYVINGHKWWSSGAGDPRC
HHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHCCCCCEEEEECEEEECCCCCCCCE
KLYIVMGKTNPDAPRHAQQSMILVPSDAPGITVRRPLNVFGYDDAPHGHMEITLENVRVP
EEEEEEECCCCCCCCHHCCCEEEEECCCCCEEEECCCEEECCCCCCCCEEEEEEECEECC
ASNLLLGEGRGFEIAQGRLGPGRIHHCMRLVGLAERALELMCRRASERVAFGKPVAAQTV
HHHEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
TQERIAEARCMIEQARLLTLKTAYMMDTVGNKGARGEIAMIKVVAPNMACQVIDWAIQAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHEEEHEEEC
GGGGVSDDFPLAYAYASARTLRFADGPDEVHRNAIAKLELARHAPSPA
CCCCCCCCCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]