| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is livH [C]
Identifier: 83718825
GI number: 83718825
Start: 3785138
End: 3786331
Strand: Reverse
Name: livH [C]
Synonym: BTH_I3323
Alternate gene names: 83718825
Gene position: 3786331-3785138 (Counterclockwise)
Preceding gene: 83719664
Following gene: 83721141
Centisome position: 99.4
GC content: 66.58
Gene sequence:
>1194_bases TTGCCGGATGATGGACGCGGTCCGGCATGGAGACGCGCCCCGCGTGCGCGCCGCGCGCTGCGCCGTTTCGCGACGGCCGC TGCCCCGCAGGCCGCATTTCCTTTTTTGGGTCGACGCATTCTCAACCGACGAAACCACATGGATTTCTCCATCGCGGCAA TTCTTGCGCAGGACGGCATCACGACGGGTGCGATCTACGCGCTGCTGTCGCTCGCGCTCGTGCTCGTTTTTTCCGTCACG CGCGTGATCTTCATCCCCCAAGGCGAATTCGTCACCTACGGCGCGCTGACGCTGGCCGCGCTTCAGGCTCAGAAGTTTCC GGCAACCTGCTGGCTGCTGTTCGTCGCGGGCATCGCGTGCTTCATGCTCGAAGTGGGCGGGCTGATCCGGTATCGCGCGC GTCGACGCCAGCTTGCCCGCACGTTGACGGCGCTCGCGAGCCGTTATGTGCTGCTGCCGCTTGCGATCTACGCGGTGACC AGAAGCGTCGCCGCACAGCCGTTGCCGATGATCGCGCAGATCGCGCTCACGCTCGCGATCGTCGTGCCGCTCGGGCCGTT CATCTATCGGCTCGCGTATCAGCCGATTGCCGAGGGCACCACGCTGCTGCTGCTGATCGTGTCGGTTGCCGTGCATTTCG CGCTGGTCGGGCTCGGACTCGTCATGTTCGGCGCGGAAGGCTCGCGCACGGCTGCGTTCTCCGACGCGTCGCTCGCGCTC GGCAGCCTGTCGATTTCGACGCAGAGCGAGTGGGTGGTCGGCACCGCGCTTGCGCTGATCGCTGCGCTCTATCTGTATTT CGAGCGCACGCTGCCCGGCAAGGCGCTGCGCGCGACGTCGGTGAACCGCCTCGGCGCGCGGCTCGTCGGTATCGGCACGA CCGAGGCCGGGCGGCTCGCGTTCACGCTCGCGGCAGGGCTTGGCGCGTTGTCGGGCGTGCTCGTCGGGCCGCTAACGACG ATCTACTACGATTCCGGCTTCCTGATCGGCTTGAAAGGCTTCGTCGGCGCGATCATCGGCGGGCTCGTCAGCTATCCGCT GGCCGCGGCCGGATCGCTTCTCGTCGGCGTGCTGGAGTCGTACTCGTCGTTCTGGGCGAGCGCGTACAAGGAGGTGATCG TTTTCACGCTGATCGTGCCGGTGCTGCTGTGGCGCAGCCTTGCGGCGCCACAAACGGAAGACGAGGAGGCGTGA
Upstream 100 bases:
>100_bases CCGGCACGCAGGGGCTGCGTGATCGTCATGCGGACACGTCGCGTGACACCGCAAGGGTTTCACGTCGCACGCGCATCGGC GAGCGGCGCGCTTTTTTCGT
Downstream 100 bases:
>100_bases CGCGATGAAAGCGATCTTGCGCAACAAGGCGCTCTGGCTGTTCCTCGTCGTGATGTTCGCGCTGCCGGCCTTGCCTGGTG CGGCGCGCGTGCCCGAGTAC
Product: branched-chain amino acid ABC transporter permease
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: ABC Transporter Permease Protein; Branched-Chain Amino Acid ABC Transporter Permease; Branched-Chain Amino Acid ABC Transporter Permease Protein; Branched-Chain Amino Acid Transport System Permease Protein; ABC Transporter Permease; Inner-Membrane TranslocatorABC Transporter ; Branched Chain Amino Acid ABC Transporter Permease; ABC-Transporter Permease Component; Amino Acid Or Sugar ABC Transport System Permease Protein; Branched-Chain Amino Acid ABC Transporter Membrane Protein; ABC Transporter ATPase Component; Branched-Chain Amino Acid Transport System Permease; Amino Acid ABC Transporter Permease; ABC Transporter Membrane Spanning Protein
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MPDDGRGPAWRRAPRARRALRRFATAAAPQAAFPFLGRRILNRRNHMDFSIAAILAQDGITTGAIYALLSLALVLVFSVT RVIFIPQGEFVTYGALTLAALQAQKFPATCWLLFVAGIACFMLEVGGLIRYRARRRQLARTLTALASRYVLLPLAIYAVT RSVAAQPLPMIAQIALTLAIVVPLGPFIYRLAYQPIAEGTTLLLLIVSVAVHFALVGLGLVMFGAEGSRTAAFSDASLAL GSLSISTQSEWVVGTALALIAALYLYFERTLPGKALRATSVNRLGARLVGIGTTEAGRLAFTLAAGLGALSGVLVGPLTT IYYDSGFLIGLKGFVGAIIGGLVSYPLAAAGSLLVGVLESYSSFWASAYKEVIVFTLIVPVLLWRSLAAPQTEDEEA
Sequences:
>Translated_397_residues MPDDGRGPAWRRAPRARRALRRFATAAAPQAAFPFLGRRILNRRNHMDFSIAAILAQDGITTGAIYALLSLALVLVFSVT RVIFIPQGEFVTYGALTLAALQAQKFPATCWLLFVAGIACFMLEVGGLIRYRARRRQLARTLTALASRYVLLPLAIYAVT RSVAAQPLPMIAQIALTLAIVVPLGPFIYRLAYQPIAEGTTLLLLIVSVAVHFALVGLGLVMFGAEGSRTAAFSDASLAL GSLSISTQSEWVVGTALALIAALYLYFERTLPGKALRATSVNRLGARLVGIGTTEAGRLAFTLAAGLGALSGVLVGPLTT IYYDSGFLIGLKGFVGAIIGGLVSYPLAAAGSLLVGVLESYSSFWASAYKEVIVFTLIVPVLLWRSLAAPQTEDEEA >Mature_396_residues PDDGRGPAWRRAPRARRALRRFATAAAPQAAFPFLGRRILNRRNHMDFSIAAILAQDGITTGAIYALLSLALVLVFSVTR VIFIPQGEFVTYGALTLAALQAQKFPATCWLLFVAGIACFMLEVGGLIRYRARRRQLARTLTALASRYVLLPLAIYAVTR SVAAQPLPMIAQIALTLAIVVPLGPFIYRLAYQPIAEGTTLLLLIVSVAVHFALVGLGLVMFGAEGSRTAAFSDASLALG SLSISTQSEWVVGTALALIAALYLYFERTLPGKALRATSVNRLGARLVGIGTTEAGRLAFTLAAGLGALSGVLVGPLTTI YYDSGFLIGLKGFVGAIIGGLVSYPLAAAGSLLVGVLESYSSFWASAYKEVIVFTLIVPVLLWRSLAAPQTEDEEA
Specific function: Part Of The Binding-Protein-Dependent Transport System For Branched-Chain Amino Acids. Probably Responsible For The Translocation Of The Substrates Across The Membrane. [C]
COG id: COG0559
COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789866, Length=345, Percent_Identity=27.8260869565217, Blast_Score=65, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42205; Mature: 42074
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDDGRGPAWRRAPRARRALRRFATAAAPQAAFPFLGRRILNRRNHMDFSIAAILAQDGI CCCCCCCCCHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC TTGAIYALLSLALVLVFSVTRVIFIPQGEFVTYGALTLAALQAQKFPATCWLLFVAGIAC CHHHHHHHHHHHHHHHHHHHHHEEECCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHH FMLEVGGLIRYRARRRQLARTLTALASRYVLLPLAIYAVTRSVAAQPLPMIAQIALTLAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VVPLGPFIYRLAYQPIAEGTTLLLLIVSVAVHFALVGLGLVMFGAEGSRTAAFSDASLAL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHH GSLSISTQSEWVVGTALALIAALYLYFERTLPGKALRATSVNRLGARLVGIGTTEAGRLA HEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCCCCCHHH FTLAAGLGALSGVLVGPLTTIYYDSGFLIGLKGFVGAIIGGLVSYPLAAAGSLLVGVLES HHHHHHHHHHHHHHHHHHHHHEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YSSFWASAYKEVIVFTLIVPVLLWRSLAAPQTEDEEA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PDDGRGPAWRRAPRARRALRRFATAAAPQAAFPFLGRRILNRRNHMDFSIAAILAQDGI CCCCCCCCHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC TTGAIYALLSLALVLVFSVTRVIFIPQGEFVTYGALTLAALQAQKFPATCWLLFVAGIAC CHHHHHHHHHHHHHHHHHHHHHEEECCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHH FMLEVGGLIRYRARRRQLARTLTALASRYVLLPLAIYAVTRSVAAQPLPMIAQIALTLAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VVPLGPFIYRLAYQPIAEGTTLLLLIVSVAVHFALVGLGLVMFGAEGSRTAAFSDASLAL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHH GSLSISTQSEWVVGTALALIAALYLYFERTLPGKALRATSVNRLGARLVGIGTTEAGRLA HEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCCCCCHHH FTLAAGLGALSGVLVGPLTTIYYDSGFLIGLKGFVGAIIGGLVSYPLAAAGSLLVGVLES HHHHHHHHHHHHHHHHHHHHHEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YSSFWASAYKEVIVFTLIVPVLLWRSLAAPQTEDEEA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA