| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is yusP [H]
Identifier: 83718792
GI number: 83718792
Start: 615470
End: 617119
Strand: Direct
Name: yusP [H]
Synonym: BTH_I0541
Alternate gene names: 83718792
Gene position: 615470-617119 (Clockwise)
Preceding gene: 83719676
Following gene: 83721601
Centisome position: 16.16
GC content: 68.0
Gene sequence:
>1650_bases ATGCGTGATAGAATCTTCGATTCGTTGACGCATCAAAAGTTGCGCGAACAAAAGATGGCAGTCCATACCGCCGCCCACCA TTCGAGCGGGCAAGTCCTTCCGTTTCGCGAGTCGCTGCTCGCGATGCTCGGCATCTCCTTCGTCACGATGCTCGTCGCGC TCGACCAGACCGTCGTCGGCACCGCACTGCCGACGATCGTCGCCGAACTGCGCGGCTTCGACCTGTACGCGTGGGTCGCG ACGTCGTATCTGCTCGCATCGGTGATCACCGTGCCGATTTTCGGGCGGCTCGGCGATTACTACGGGCGCAAGCCGTTCGT GATCGCGTCGCTTATCGTGTTCACGGGCGCGTCGGTGCTGTGCGGGATGGCGCACGACATGCTGTCGCTCGTGCTCGCAC GCGGATTGCAGGGAATCGGCGGCGGGATGCTCGTCGGCACCGCGTTCGCGTGCATTCCGGACCTCTTTCCCGATTCGGTC GTGCGGTTGCGCTGGCAGGTGCTGATGAGCTCGGCGTTCGGGATCGCGAACGCGGTCGGGCCGTCGCTCGGCGGCGTGCT CACGCAGAATTACGGCTGGCGCTCGGTGTTCTACGTGAATCTGCCGGTCGGCCTGCTGTCGCTCGTCTTCGTCTGGCGCT ATCTGCCGCACATGCGGCACGTCGAGCATACGGCCAAGATGCGGCTCGACTGGCCGGGGGCGCTCCTGATCGCCGCGACG CTCGGCGCGATGCAGCTCTTCGTCGAATGGCTGCCGAAGTACGGCATCGGCGGCTGGTCGACGCTGCTCCTCGTCGTCGC GCTCGCGAGCGGCGTCGCGCTGTGGCGCTGGGAGCAGCGCTGCGCGCAGCCGATTCTGCCGTTCGACATGTTCTCGAACC GCGCGCTGTCGACGCTCTTCATCCTCGCGATCCTCGCCGGCTTCGCGATGTTCTCGCTGCTCTTCTACGCGCCGCTGCTG TTCCAGGGCGGCTTCGGGATGTCGCCGCAGCAGGCGGGCGTCGTCATCACGCCGCTCGTCGTGTTCATCACGATCGGCAG CATCATGAACGGCCGTGTGATCACGCGGATCCGCCACCCGAACGCGATGCTGTACGCGGGTTTCCTGCTGTTCGCGCTCG CGTGCGCGGGCGTCGTCGCGTCGACGCATGCGACGCCCGGCTGGGCGCTGATGGCGCTGATGGTGGCGGGCGGCGTCGGG CTCGGCTTCGTGTTGCCGAATCTGACCGTGTTCGCGCAGCAGACGGCAGGCCGCGAGCATCTCGGGATCGCGACCGCGCT GCTTCAGTCGCTGCGCATGGTGGGCGGGATGGCGGGCGCGGCGCTCACCGGCACGCTCATCAACCAGCGCTACGCGAGCG GCGTGCGCGACGCGCTCGCCGCGGACGGCGCGCTGCGCTGGCAGGCGCGTCTTGCCGATCCGCAGGTGCTGATCGACCGC GCCGCGCAGTCGCGCGTGGTGGACGAACTCGTGCGCGCGGGGCATCATGGCGCCCATTTGCTCGAAGCGGCGCGCGAATC GCTCGTCGGCGCGATCCATATCGGCATCGCTCTCGGCACGCTCGTCGCGCTCGCGGCGGTGTGGCAATGCCGCCGCGTGC CGCCCGTCGAACTGCGCCGCAAGCTCGAGCCGAGCGTCGTCGCCGAGTGA
Upstream 100 bases:
>100_bases ATCGTCGGCCGACAGCGTCGGCCCGGCAACAAGTGTGAGCGGTTCCATCTGACTCCTTCGCGGCGCGCGCATCGCATGGG GGCGCCGGCTAGATTACCTG
Downstream 100 bases:
>100_bases GCGCGCGCTTCGCCACATCATTCACGCATACCGGAGCCGCAGTCAGCGCATGGAAGAACAGGACCGCATCGCGATCTTGC AGCAGTTCGGACGCACGTAC
Product: EmrB/QacA family drug resistance transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 549; Mature: 549
Protein sequence:
>549_residues MRDRIFDSLTHQKLREQKMAVHTAAHHSSGQVLPFRESLLAMLGISFVTMLVALDQTVVGTALPTIVAELRGFDLYAWVA TSYLLASVITVPIFGRLGDYYGRKPFVIASLIVFTGASVLCGMAHDMLSLVLARGLQGIGGGMLVGTAFACIPDLFPDSV VRLRWQVLMSSAFGIANAVGPSLGGVLTQNYGWRSVFYVNLPVGLLSLVFVWRYLPHMRHVEHTAKMRLDWPGALLIAAT LGAMQLFVEWLPKYGIGGWSTLLLVVALASGVALWRWEQRCAQPILPFDMFSNRALSTLFILAILAGFAMFSLLFYAPLL FQGGFGMSPQQAGVVITPLVVFITIGSIMNGRVITRIRHPNAMLYAGFLLFALACAGVVASTHATPGWALMALMVAGGVG LGFVLPNLTVFAQQTAGREHLGIATALLQSLRMVGGMAGAALTGTLINQRYASGVRDALAADGALRWQARLADPQVLIDR AAQSRVVDELVRAGHHGAHLLEAARESLVGAIHIGIALGTLVALAAVWQCRRVPPVELRRKLEPSVVAE
Sequences:
>Translated_549_residues MRDRIFDSLTHQKLREQKMAVHTAAHHSSGQVLPFRESLLAMLGISFVTMLVALDQTVVGTALPTIVAELRGFDLYAWVA TSYLLASVITVPIFGRLGDYYGRKPFVIASLIVFTGASVLCGMAHDMLSLVLARGLQGIGGGMLVGTAFACIPDLFPDSV VRLRWQVLMSSAFGIANAVGPSLGGVLTQNYGWRSVFYVNLPVGLLSLVFVWRYLPHMRHVEHTAKMRLDWPGALLIAAT LGAMQLFVEWLPKYGIGGWSTLLLVVALASGVALWRWEQRCAQPILPFDMFSNRALSTLFILAILAGFAMFSLLFYAPLL FQGGFGMSPQQAGVVITPLVVFITIGSIMNGRVITRIRHPNAMLYAGFLLFALACAGVVASTHATPGWALMALMVAGGVG LGFVLPNLTVFAQQTAGREHLGIATALLQSLRMVGGMAGAALTGTLINQRYASGVRDALAADGALRWQARLADPQVLIDR AAQSRVVDELVRAGHHGAHLLEAARESLVGAIHIGIALGTLVALAAVWQCRRVPPVELRRKLEPSVVAE >Mature_549_residues MRDRIFDSLTHQKLREQKMAVHTAAHHSSGQVLPFRESLLAMLGISFVTMLVALDQTVVGTALPTIVAELRGFDLYAWVA TSYLLASVITVPIFGRLGDYYGRKPFVIASLIVFTGASVLCGMAHDMLSLVLARGLQGIGGGMLVGTAFACIPDLFPDSV VRLRWQVLMSSAFGIANAVGPSLGGVLTQNYGWRSVFYVNLPVGLLSLVFVWRYLPHMRHVEHTAKMRLDWPGALLIAAT LGAMQLFVEWLPKYGIGGWSTLLLVVALASGVALWRWEQRCAQPILPFDMFSNRALSTLFILAILAGFAMFSLLFYAPLL FQGGFGMSPQQAGVVITPLVVFITIGSIMNGRVITRIRHPNAMLYAGFLLFALACAGVVASTHATPGWALMALMVAGGVG LGFVLPNLTVFAQQTAGREHLGIATALLQSLRMVGGMAGAALTGTLINQRYASGVRDALAADGALRWQARLADPQVLIDR AAQSRVVDELVRAGHHGAHLLEAARESLVGAIHIGIALGTLVALAAVWQCRRVPPVELRRKLEPSVVAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=437, Percent_Identity=28.1464530892449, Blast_Score=126, Evalue=3e-30, Organism=Escherichia coli, GI1790195, Length=308, Percent_Identity=27.9220779220779, Blast_Score=105, Evalue=7e-24, Organism=Escherichia coli, GI1789042, Length=419, Percent_Identity=25.7756563245823, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1788710, Length=418, Percent_Identity=25.5980861244019, Blast_Score=96, Evalue=8e-21, Organism=Escherichia coli, GI1788392, Length=324, Percent_Identity=26.5432098765432, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1790146, Length=169, Percent_Identity=30.7692307692308, Blast_Score=62, Evalue=1e-10, Organism=Saccharomyces cerevisiae, GI6319770, Length=397, Percent_Identity=24.6851385390428, Blast_Score=102, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6323735, Length=328, Percent_Identity=25.609756097561, Blast_Score=97, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6322958, Length=474, Percent_Identity=21.9409282700422, Blast_Score=81, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6325455, Length=159, Percent_Identity=30.188679245283, Blast_Score=77, Evalue=9e-15, Organism=Saccharomyces cerevisiae, GI6321663, Length=183, Percent_Identity=28.9617486338798, Blast_Score=75, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 59065; Mature: 59065
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDRIFDSLTHQKLREQKMAVHTAAHHSSGQVLPFRESLLAMLGISFVTMLVALDQTVVG CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TALPTIVAELRGFDLYAWVATSYLLASVITVPIFGRLGDYYGRKPFVIASLIVFTGASVL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH CGMAHDMLSLVLARGLQGIGGGMLVGTAFACIPDLFPDSVVRLRWQVLMSSAFGIANAVG HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC PSLGGVLTQNYGWRSVFYVNLPVGLLSLVFVWRYLPHMRHVEHTAKMRLDWPGALLIAAT CHHCCHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHH LGAMQLFVEWLPKYGIGGWSTLLLVVALASGVALWRWEQRCAQPILPFDMFSNRALSTLF HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHCCHHHHHHH ILAILAGFAMFSLLFYAPLLFQGGFGMSPQQAGVVITPLVVFITIGSIMNGRVITRIRHP HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECC NAMLYAGFLLFALACAGVVASTHATPGWALMALMVAGGVGLGFVLPNLTVFAQQTAGREH CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHCHHHHHHHHCCCHH LGIATALLQSLRMVGGMAGAALTGTLINQRYASGVRDALAADGALRWQARLADPQVLIDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHH AAQSRVVDELVRAGHHGAHLLEAARESLVGAIHIGIALGTLVALAAVWQCRRVPPVELRR HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH KLEPSVVAE CCCCHHCCC >Mature Secondary Structure MRDRIFDSLTHQKLREQKMAVHTAAHHSSGQVLPFRESLLAMLGISFVTMLVALDQTVVG CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TALPTIVAELRGFDLYAWVATSYLLASVITVPIFGRLGDYYGRKPFVIASLIVFTGASVL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH CGMAHDMLSLVLARGLQGIGGGMLVGTAFACIPDLFPDSVVRLRWQVLMSSAFGIANAVG HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC PSLGGVLTQNYGWRSVFYVNLPVGLLSLVFVWRYLPHMRHVEHTAKMRLDWPGALLIAAT CHHCCHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHH LGAMQLFVEWLPKYGIGGWSTLLLVVALASGVALWRWEQRCAQPILPFDMFSNRALSTLF HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHCCHHHHHHH ILAILAGFAMFSLLFYAPLLFQGGFGMSPQQAGVVITPLVVFITIGSIMNGRVITRIRHP HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECC NAMLYAGFLLFALACAGVVASTHATPGWALMALMVAGGVGLGFVLPNLTVFAQQTAGREH CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHCHHHHHHHHCCCHH LGIATALLQSLRMVGGMAGAALTGTLINQRYASGVRDALAADGALRWQARLADPQVLIDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHH AAQSRVVDELVRAGHHGAHLLEAARESLVGAIHIGIALGTLVALAAVWQCRRVPPVELRR HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH KLEPSVVAE CCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]