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The map label for this gene is rssA [H]

Identifier: 83718780

GI number: 83718780

Start: 37305

End: 38684

Strand: Direct

Name: rssA [H]

Synonym: BTH_I0038

Alternate gene names: 83718780

Gene position: 37305-38684 (Clockwise)

Preceding gene: 83720884

Following gene: 83719158

Centisome position: 0.98

GC content: 70.51

Gene sequence:

>1380_bases
ATGTCGCACAGCCTGCGCGGCCGATTGCTTTGGTGGCTGCTGCTGCCGCTTGCCGTGTTCGTCGCGATCGCGGGCGCGAT
GTCGTACGACACCGCGCGCAAGACGGCCGACCTCGTGCAGGACGGCGCGCTCGTCGCGTCCGCGCGCGCGATCGCGGAGG
ATGTCAACTGGGAAAACGGCGCGCTCGTCGCGAACGTGCCGCCCGCGGCGCTCGAACTGTTCGAATCGCCCGCGCGGGAT
CAGGTGTACTACATGGTTCGCACGGGCGGCGGCCGGCTGCTGGCCGGCAACCCCGATCTCGGCGGCCCGGGCGCACCGGC
CGCGCCCGGCGCGCAACCGGTGCTGTTCGACACGGCGCTCAATGGGCTGGCGATTCGCGCGGTCGCTTACACGCGCGAGC
TCTACAACGCGGGCGACACCGAAACGGTGACGGTCGTCGTCGGCAAGACGCAGACCTCGCGGCAGATGATGATCGCGGCG
ATCTGGCATCCTCAGCTCTGGCGGCTCGCGCTGATGCTCGCGCTCGCGATGGCGCTCGTCTATCTCGGGCTCACGTTCGA
ATTGCGGCCGCTGATGAAGCTGAAGGACGATGTCGCGGACCGCGGGCCGATGGAGCTCGAGCCGATCCGCACCGAGCGGC
TGCATTTCGAGCTGCGGCCGATCGTCGACGCGATCAACCAGTGCATCGCGCGGCTGAACCTGCACGCGGCGACGCAGCGC
CGCTTCATCGCCGACGCCGCGCATCAGTTGCGCACGCCGATCGCGGTGATCGACACGCAGATCCAGTGCGCGCGGCAGCG
CGAGGACGGCGACGCGGCGCTCGCCGCGCTGCTCGCGTCGATGCAGCGCAGCAGCCGCAGGATGGCGGACGTCACCGACA
AGCTGCTGCTGCTCGCGCATGCGGAAGCGGCGTCGCCCGCGCGGCTCGCCGCGCGCGTCGACGTCGCGGCCGTCGTGTCG
GGCGTGCTCGAGGAGGCGATCGTGCTTGCCGAGCGGCGGCGCATCGATCTCGGCGCGGAGCTCGACGACGATCTGCAGGT
GGCGGGCAGCGAAAGCCTGCTCTCGGCGCTCCTGATGAACCTCGTCGACAACGCGGTACGCTATACGCACGAAGGCGGCT
GCGTGACGGTGAGCGCGCGGCGCGACGGCGAAGCGGTCGTGCTCGACGTCGTCGACGACGGCCCCGGCATTCCGGCCGAA
GCGCGGCCGCACGTGTTCAAGCGCTTTTATCGCGTCGCGAAGGACGAGGAAGGCACGGGCCTCGGGCTCGCGATCGTCGA
GGAGATCGCGCAGTCGCACGGCGGCACGGTCACGCTCGGGACAGGCCCCGGCAACCGGGGCGTGAGGATGACCGTGCGGC
TGCCCGCCTATCGCAATTGA

Upstream 100 bases:

>100_bases
AAGTGGCGGCCCGCCGCGTTCTGAAGACGATGCATCAACGAAACGGCGCATCTTCGGTGCGCCGTTTCGTTTTCGGGCCG
GAGTTTGGAGGGATAACGGC

Downstream 100 bases:

>100_bases
GAGAGCCCCGATGAAACTGCTGCTCGTGGAAGACAACGCGGAACTCGCGCACTGGATCGTCGATCTGCTGCGCGGGGAAG
GCTTCGGCGTCGATTCGGCG

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MSHSLRGRLLWWLLLPLAVFVAIAGAMSYDTARKTADLVQDGALVASARAIAEDVNWENGALVANVPPAALELFESPARD
QVYYMVRTGGGRLLAGNPDLGGPGAPAAPGAQPVLFDTALNGLAIRAVAYTRELYNAGDTETVTVVVGKTQTSRQMMIAA
IWHPQLWRLALMLALAMALVYLGLTFELRPLMKLKDDVADRGPMELEPIRTERLHFELRPIVDAINQCIARLNLHAATQR
RFIADAAHQLRTPIAVIDTQIQCARQREDGDAALAALLASMQRSSRRMADVTDKLLLLAHAEAASPARLAARVDVAAVVS
GVLEEAIVLAERRRIDLGAELDDDLQVAGSESLLSALLMNLVDNAVRYTHEGGCVTVSARRDGEAVVLDVVDDGPGIPAE
ARPHVFKRFYRVAKDEEGTGLGLAIVEEIAQSHGGTVTLGTGPGNRGVRMTVRLPAYRN

Sequences:

>Translated_459_residues
MSHSLRGRLLWWLLLPLAVFVAIAGAMSYDTARKTADLVQDGALVASARAIAEDVNWENGALVANVPPAALELFESPARD
QVYYMVRTGGGRLLAGNPDLGGPGAPAAPGAQPVLFDTALNGLAIRAVAYTRELYNAGDTETVTVVVGKTQTSRQMMIAA
IWHPQLWRLALMLALAMALVYLGLTFELRPLMKLKDDVADRGPMELEPIRTERLHFELRPIVDAINQCIARLNLHAATQR
RFIADAAHQLRTPIAVIDTQIQCARQREDGDAALAALLASMQRSSRRMADVTDKLLLLAHAEAASPARLAARVDVAAVVS
GVLEEAIVLAERRRIDLGAELDDDLQVAGSESLLSALLMNLVDNAVRYTHEGGCVTVSARRDGEAVVLDVVDDGPGIPAE
ARPHVFKRFYRVAKDEEGTGLGLAIVEEIAQSHGGTVTLGTGPGNRGVRMTVRLPAYRN
>Mature_458_residues
SHSLRGRLLWWLLLPLAVFVAIAGAMSYDTARKTADLVQDGALVASARAIAEDVNWENGALVANVPPAALELFESPARDQ
VYYMVRTGGGRLLAGNPDLGGPGAPAAPGAQPVLFDTALNGLAIRAVAYTRELYNAGDTETVTVVVGKTQTSRQMMIAAI
WHPQLWRLALMLALAMALVYLGLTFELRPLMKLKDDVADRGPMELEPIRTERLHFELRPIVDAINQCIARLNLHAATQRR
FIADAAHQLRTPIAVIDTQIQCARQREDGDAALAALLASMQRSSRRMADVTDKLLLLAHAEAASPARLAARVDVAAVVSG
VLEEAIVLAERRRIDLGAELDDDLQVAGSESLLSALLMNLVDNAVRYTHEGGCVTVSARRDGEAVVLDVVDDGPGIPAEA
RPHVFKRFYRVAKDEEGTGLGLAIVEEIAQSHGGTVTLGTGPGNRGVRMTVRLPAYRN

Specific function: Member of the two-component regulatory system rssA/rssB involved in regulation of swarming motility which has been shown to be inhibited by saturated fatty acids. RssA/rssB regulates cellular fatty acid composition, hemolysin production and cell surface t

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=301, Percent_Identity=32.890365448505, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1786600, Length=221, Percent_Identity=33.4841628959276, Blast_Score=122, Evalue=5e-29,
Organism=Escherichia coli, GI1786783, Length=244, Percent_Identity=34.4262295081967, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1790551, Length=287, Percent_Identity=31.0104529616725, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI1790861, Length=279, Percent_Identity=30.8243727598566, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1788393, Length=251, Percent_Identity=30.6772908366534, Blast_Score=105, Evalue=7e-24,
Organism=Escherichia coli, GI1790346, Length=244, Percent_Identity=30.327868852459, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI145693157, Length=232, Percent_Identity=27.5862068965517, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1787374, Length=317, Percent_Identity=25.2365930599369, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1790436, Length=214, Percent_Identity=29.4392523364486, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1787894, Length=311, Percent_Identity=27.0096463022508, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1788279, Length=314, Percent_Identity=25.1592356687898, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1789808, Length=296, Percent_Identity=29.0540540540541, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI48994928, Length=231, Percent_Identity=25.5411255411255, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1786912, Length=103, Percent_Identity=38.8349514563107, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788549, Length=225, Percent_Identity=24.8888888888889, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI87082128, Length=249, Percent_Identity=25.3012048192771, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI87081816, Length=125, Percent_Identity=34.4, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1788713, Length=229, Percent_Identity=24.0174672489083, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 49426; Mature: 49294

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHSLRGRLLWWLLLPLAVFVAIAGAMSYDTARKTADLVQDGALVASARAIAEDVNWENG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC
ALVANVPPAALELFESPARDQVYYMVRTGGGRLLAGNPDLGGPGAPAAPGAQPVLFDTAL
EEEECCCHHHHHHHHCCCCCEEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCEEEHHHC
NGLAIRAVAYTRELYNAGDTETVTVVVGKTQTSRQMMIAAIWHPQLWRLALMLALAMALV
CCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHEEEEEECCHHHHHHHHHHHHHHHHH
YLGLTFELRPLMKLKDDVADRGPMELEPIRTERLHFELRPIVDAINQCIARLNLHAATQR
HHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEHHHHHHHHHHHHHHHHHHHHHHHH
RFIADAAHQLRTPIAVIDTQIQCARQREDGDAALAALLASMQRSSRRMADVTDKLLLLAH
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
AEAASPARLAARVDVAAVVSGVLEEAIVLAERRRIDLGAELDDDLQVAGSESLLSALLMN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHH
LVDNAVRYTHEGGCVTVSARRDGEAVVLDVVDDGPGIPAEARPHVFKRFYRVAKDEEGTG
HHHHHHHEECCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCC
LGLAIVEEIAQSHGGTVTLGTGPGNRGVRMTVRLPAYRN
CHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCC
>Mature Secondary Structure 
SHSLRGRLLWWLLLPLAVFVAIAGAMSYDTARKTADLVQDGALVASARAIAEDVNWENG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC
ALVANVPPAALELFESPARDQVYYMVRTGGGRLLAGNPDLGGPGAPAAPGAQPVLFDTAL
EEEECCCHHHHHHHHCCCCCEEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCEEEHHHC
NGLAIRAVAYTRELYNAGDTETVTVVVGKTQTSRQMMIAAIWHPQLWRLALMLALAMALV
CCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHEEEEEECCHHHHHHHHHHHHHHHHH
YLGLTFELRPLMKLKDDVADRGPMELEPIRTERLHFELRPIVDAINQCIARLNLHAATQR
HHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEHHHHHHHHHHHHHHHHHHHHHHHH
RFIADAAHQLRTPIAVIDTQIQCARQREDGDAALAALLASMQRSSRRMADVTDKLLLLAH
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
AEAASPARLAARVDVAAVVSGVLEEAIVLAERRRIDLGAELDDDLQVAGSESLLSALLMN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHH
LVDNAVRYTHEGGCVTVSARRDGEAVVLDVVDDGPGIPAEARPHVFKRFYRVAKDEEGTG
HHHHHHHEECCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCC
LGLAIVEEIAQSHGGTVTLGTGPGNRGVRMTVRLPAYRN
CHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA