| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83718765
Identifier: 83718765
GI number: 83718765
Start: 599005
End: 601524
Strand: Reverse
Name: 83718765
Synonym: BTH_I0528
Alternate gene names: NA
Gene position: 601524-599005 (Counterclockwise)
Preceding gene: 83721107
Following gene: 83718828
Centisome position: 15.79
GC content: 71.83
Gene sequence:
>2520_bases ATGAAATCCGCGTTGGATCGCGTGGCGCGCGGCGCTGCCCAATGGACGTTGATCGCGACGCCCGCCGGCGCGATCGCGCG GCCGAGCGAACTCGGCGACGCCGGCTGGTGCGCCGCGAGCGTGCCCGGCACCGTCGCGCAGGCGCTCGCCGCCGCGCGAC GCTTCGATCCTTCGCATCCGTATCCGCTCGGCGATAGCGACTATTGGTATCGAACGACGCTGCACGGCGCGGGCCCGCGC ATCGTCCGCCTGAACGGCCTCGCGACGATCGCCGAGGTCTGGCTCGACGACACGCTGCTGCTCTGCTCGGACAACATGTA CGTCTCGCACGACGTCGCCGTGACGCTCCGCGGCGCGAATCGCCTCGCGATCTGCTTTCGCTCGCTCGACCGGCATCTCG CCGCGCATCCGCCGCGCGGCCGCGCGCGCTGGCGCACGCGCCTCGTCGACACGCCCGCGCTGCGCGGCGTGCGCGCGACG TTCCTCGGCCGGATGCCGGGCTGGTTTCCGGCGATCGAGCCGATCGGGCCGTGGCGCCCGATCGACCTCGTGAATCCGGC CGGCGCGCCGACGATCGTGCGCGACACCCTGCGCGCGACGCTGGACGGCGGCGACGGCGTGCTCGACGCGACGCTCGAAT TCGCCGCGCCGCTGCCGAGCGCGACGCGCGCGCGACTCGTTTGCGGCGCGCATGCGGCAACGCTCGAAGCAACCGGTCCG CGCACCGCGCGCGCGACGCTCAGGGTCCCGAACGTCACGCCGTGGTGGCCGCATACGCACGGCGAGCCCGCGTTGTACGA CGTCGGCGTCGAAGTTGGCGGCGCGACGATTCCGCTCGCGAAAACCGGCTTTCGCACGCTCGCCGTCGAACGCGGCGACG ACGGCCGGGGCTTCGCGCTGTCGATCAACGGCACGCCGTTCTTCGCGCGCGGCGCGTGCTGGACGAGCGCCGACCCGGTC GGCCTGAACGCCGAACCGGCCGCCTACCGCCGCGCGCTTTCGCTCGCGCGCGACGCCGGCTGCAACATGATCCGCGTCGG CGGCACGATGACCTACGAAGCCGACGCGTTCTACGCGCTCTGCGACGAGCTCGGCCTGCTCGTCTGGCAGGACTTCATGC TCGCGAACTTCGACTACCCGTCGGGCGACCCGCGCTTCGCCGAATCGCTGAAGCGCGAAGCCGAACAGTTCCTCGGCCTG CACGCGGCGCGCCCGTCGATCGCCGTGCTGTGCGGCGGCAGCGAAATCGCGCAGCAGGCGGCGATGGTCGGGCTCGCGCC CGACGAACGCCGCGTGCCCGCCACCGAACAGTTGCTCGCCGAACTGTGCGCCGCGCATCGGCCCGATGCGGTCTACGTCA GCGATTCGCCGCACGGCGGCGTGCTGCCGTTCGCGCCGCGCGAAGGTCTCACGCATTACTACGGCGTCGGCGCGTATCTG CGGCCGCCCGAGGACGCCCGTCGTGCCGGCGTGCGCTTCGCGAGCGAGTGCCTTGCATTCGCGAACGTGCCGTGCGACGA GACGCTCGCGTCGATCGGCTCGCCCGCCGCGCACGAGCCCGCCTGGAAACGCGCGGTGCCGCGCGATCCGGGCGCGCCGT GGGATTTCGACGACGTGCGCGATCATTACCTGCGCACGCTGTACGGCGTCGAGCCAGCGCGCCTGCGCGGCTTCGATCCC GCCCGCTATCTGACGCTCTCGCGCGCGATCGTCGCCGATCTCGTCGGGGAGACGCTCGCCGAATGGCGGCGCGTCGGCTC GACGTGCGCGGGCGCGCTCGTCTGGCAGTTCCAGGACGTGATGCCGGGCGCAGGCTGGGGCCTCGTCGACGCGCACGGCC GGCCGAAATCCGCGTGGCACGCGTTCAGGCGCGTATCGCAGCCGCGGCAGATCCTGCTAACCGACGAGGGGCTCAACGGC CTCGACGTGCACGTGCTCAACGATACGCCGGCGCCGCTCGACGCCCGCATCGAGCTCGTCGCGCTGCGCGATGGCAAGAC GCCGATCGCGCGCGCGAGCCGCGCGTTGCGCGTCGGCGCCCACGCAGGCGAATGCGTGAATTCCGCCGACCTGCTCGGCC GATTCTTCGATTTCACGTATGCGTACCGCTTCGGCCCGCGCGAGCACGACGTCGTGATCGCATCGCTGTACGCGGCCGAC GGCACGCTGCTGTCGCAGGCGTTCCACTTCCCCGAGCGCACCGCGCCGACCGTGTTCGAGCGCGGCGACATCGGCCTCGA AGCGAGCGCCGCGTATCGAGACGGCCGCTGGCACCTCGACGTGCAAACGCGCACGTTCGCGCGCTACGTGCATGTGTGCG CCCCCGGCTTGCTGCCCGACATCGACTGGTTTCATCTCGCGCCGGGTGCCGCCGCGCGCATCGTGCTCGCCGCCGCTCCT CATTCCCCCGCTTACGACAACAGCCCGCCCGACGCGTGCGCGCCTCGCCCAGCGCCGCCCGCGATCGAAGTGCGCGCACT CAATTCCAACAAGACCATTCGCCCGAGGATAGAAAATTGA
Upstream 100 bases:
>100_bases TCGTCGACGGCGTCGCTCGCATCACGCCGCCCGGCAATGCCGAGCCGAATCCGCCGTTCGGCACGTTGTACGCGCCGCCG AGGCCCGTCGCCGCGGCCCG
Downstream 100 bases:
>100_bases GACCAGTCCGATTCGACGATTGCCTGGGATGGCTGCACGAGGGGCGCACGCGACGCGGCGTCGTGATCTGCGAAGCGCTC GGGCACGAGGCGCTGTGGAC
Product: beta-mannosidase-like protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family Protein; Beta-Mannosidase Protein; Glycoside Hydrolase; Mannosidase; Glycosidase; Beta-Galactosidase/Beta-Glucuronidase; Beta-Glucuronidase; Exported Glycosyl Hydrolase; Glycoside Hydrolase Family 2 Protein; Beta-Galactosidase/Beta- Glucuronidase Family Protein; O-Glycosyl Hydrolase; Beta-Galactosidase; Beta-Mannosidase Man2A; Glycosyl Hydrolase; Beta-Mannosidase-Related Protein; BETA-Mannosidase Protein; Glycosyl Hydrolase Family Protein; Glycoside Hydrolase Family 2 TIM Barrel
Number of amino acids: Translated: 839; Mature: 839
Protein sequence:
>839_residues MKSALDRVARGAAQWTLIATPAGAIARPSELGDAGWCAASVPGTVAQALAAARRFDPSHPYPLGDSDYWYRTTLHGAGPR IVRLNGLATIAEVWLDDTLLLCSDNMYVSHDVAVTLRGANRLAICFRSLDRHLAAHPPRGRARWRTRLVDTPALRGVRAT FLGRMPGWFPAIEPIGPWRPIDLVNPAGAPTIVRDTLRATLDGGDGVLDATLEFAAPLPSATRARLVCGAHAATLEATGP RTARATLRVPNVTPWWPHTHGEPALYDVGVEVGGATIPLAKTGFRTLAVERGDDGRGFALSINGTPFFARGACWTSADPV GLNAEPAAYRRALSLARDAGCNMIRVGGTMTYEADAFYALCDELGLLVWQDFMLANFDYPSGDPRFAESLKREAEQFLGL HAARPSIAVLCGGSEIAQQAAMVGLAPDERRVPATEQLLAELCAAHRPDAVYVSDSPHGGVLPFAPREGLTHYYGVGAYL RPPEDARRAGVRFASECLAFANVPCDETLASIGSPAAHEPAWKRAVPRDPGAPWDFDDVRDHYLRTLYGVEPARLRGFDP ARYLTLSRAIVADLVGETLAEWRRVGSTCAGALVWQFQDVMPGAGWGLVDAHGRPKSAWHAFRRVSQPRQILLTDEGLNG LDVHVLNDTPAPLDARIELVALRDGKTPIARASRALRVGAHAGECVNSADLLGRFFDFTYAYRFGPREHDVVIASLYAAD GTLLSQAFHFPERTAPTVFERGDIGLEASAAYRDGRWHLDVQTRTFARYVHVCAPGLLPDIDWFHLAPGAAARIVLAAAP HSPAYDNSPPDACAPRPAPPAIEVRALNSNKTIRPRIEN
Sequences:
>Translated_839_residues MKSALDRVARGAAQWTLIATPAGAIARPSELGDAGWCAASVPGTVAQALAAARRFDPSHPYPLGDSDYWYRTTLHGAGPR IVRLNGLATIAEVWLDDTLLLCSDNMYVSHDVAVTLRGANRLAICFRSLDRHLAAHPPRGRARWRTRLVDTPALRGVRAT FLGRMPGWFPAIEPIGPWRPIDLVNPAGAPTIVRDTLRATLDGGDGVLDATLEFAAPLPSATRARLVCGAHAATLEATGP RTARATLRVPNVTPWWPHTHGEPALYDVGVEVGGATIPLAKTGFRTLAVERGDDGRGFALSINGTPFFARGACWTSADPV GLNAEPAAYRRALSLARDAGCNMIRVGGTMTYEADAFYALCDELGLLVWQDFMLANFDYPSGDPRFAESLKREAEQFLGL HAARPSIAVLCGGSEIAQQAAMVGLAPDERRVPATEQLLAELCAAHRPDAVYVSDSPHGGVLPFAPREGLTHYYGVGAYL RPPEDARRAGVRFASECLAFANVPCDETLASIGSPAAHEPAWKRAVPRDPGAPWDFDDVRDHYLRTLYGVEPARLRGFDP ARYLTLSRAIVADLVGETLAEWRRVGSTCAGALVWQFQDVMPGAGWGLVDAHGRPKSAWHAFRRVSQPRQILLTDEGLNG LDVHVLNDTPAPLDARIELVALRDGKTPIARASRALRVGAHAGECVNSADLLGRFFDFTYAYRFGPREHDVVIASLYAAD GTLLSQAFHFPERTAPTVFERGDIGLEASAAYRDGRWHLDVQTRTFARYVHVCAPGLLPDIDWFHLAPGAAARIVLAAAP HSPAYDNSPPDACAPRPAPPAIEVRALNSNKTIRPRIEN >Mature_839_residues MKSALDRVARGAAQWTLIATPAGAIARPSELGDAGWCAASVPGTVAQALAAARRFDPSHPYPLGDSDYWYRTTLHGAGPR IVRLNGLATIAEVWLDDTLLLCSDNMYVSHDVAVTLRGANRLAICFRSLDRHLAAHPPRGRARWRTRLVDTPALRGVRAT FLGRMPGWFPAIEPIGPWRPIDLVNPAGAPTIVRDTLRATLDGGDGVLDATLEFAAPLPSATRARLVCGAHAATLEATGP RTARATLRVPNVTPWWPHTHGEPALYDVGVEVGGATIPLAKTGFRTLAVERGDDGRGFALSINGTPFFARGACWTSADPV GLNAEPAAYRRALSLARDAGCNMIRVGGTMTYEADAFYALCDELGLLVWQDFMLANFDYPSGDPRFAESLKREAEQFLGL HAARPSIAVLCGGSEIAQQAAMVGLAPDERRVPATEQLLAELCAAHRPDAVYVSDSPHGGVLPFAPREGLTHYYGVGAYL RPPEDARRAGVRFASECLAFANVPCDETLASIGSPAAHEPAWKRAVPRDPGAPWDFDDVRDHYLRTLYGVEPARLRGFDP ARYLTLSRAIVADLVGETLAEWRRVGSTCAGALVWQFQDVMPGAGWGLVDAHGRPKSAWHAFRRVSQPRQILLTDEGLNG LDVHVLNDTPAPLDARIELVALRDGKTPIARASRALRVGAHAGECVNSADLLGRFFDFTYAYRFGPREHDVVIASLYAAD GTLLSQAFHFPERTAPTVFERGDIGLEASAAYRDGRWHLDVQTRTFARYVHVCAPGLLPDIDWFHLAPGAAARIVLAAAP HSPAYDNSPPDACAPRPAPPAIEVRALNSNKTIRPRIEN
Specific function: Unknown
COG id: COG3250
COG function: function code G; Beta-galactosidase/beta-glucuronidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI84798622, Length=591, Percent_Identity=24.5346869712352, Blast_Score=125, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17550784, Length=473, Percent_Identity=25.369978858351, Blast_Score=107, Evalue=3e-23, Organism=Drosophila melanogaster, GI24643838, Length=661, Percent_Identity=23.6006051437216, Blast_Score=102, Evalue=1e-21, Organism=Drosophila melanogaster, GI24643840, Length=467, Percent_Identity=24.8394004282655, Blast_Score=95, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90689; Mature: 90689
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSALDRVARGAAQWTLIATPAGAIARPSELGDAGWCAASVPGTVAQALAAARRFDPSHP CCHHHHHHHCCCCCEEEEECCCCCCCCCHHCCCCCCEECCCCHHHHHHHHHHHHCCCCCC YPLGDSDYWYRTTLHGAGPRIVRLNGLATIAEVWLDDTLLLCSDNMYVSHDVAVTLRGAN CCCCCCCCEEEEEECCCCCCEEEECCHHHHHHHHHCCEEEEEECCEEEEEEEEEEEECCC RLAICFRSLDRHLAAHPPRGRARWRTRLVDTPALRGVRATFLGRMPGWFPAIEPIGPWRP HHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC IDLVNPAGAPTIVRDTLRATLDGGDGVLDATLEFAAPLPSATRARLVCGAHAATLEATGP CCCCCCCCCCHHHHHHHHHHCCCCCCEEEHHHHHHCCCCCCHHHEEEECCCCEEEECCCC RTARATLRVPNVTPWWPHTHGEPALYDVGVEVGGATIPLAKTGFRTLAVERGDDGRGFAL CCEEEEEECCCCCCCCCCCCCCCCEEEECEEECCCEECEECCCCEEEEEECCCCCCEEEE SINGTPFFARGACWTSADPVGLNAEPAAYRRALSLARDAGCNMIRVGGTMTYEADAFYAL EECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCEEEECCCHHHHH CDELGLLVWQDFMLANFDYPSGDPRFAESLKREAEQFLGLHAARPSIAVLCGGSEIAQQA HHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHH AMVGLAPDERRVPATEQLLAELCAAHRPDAVYVSDSPHGGVLPFAPREGLTHYYGVGAYL HHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCEEECCCCCC RPPEDARRAGVRFASECLAFANVPCDETLASIGSPAAHEPAWKRAVPRDPGAPWDFDDVR CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCHHHHH DHYLRTLYGVEPARLRGFDPARYLTLSRAIVADLVGETLAEWRRVGSTCAGALVWQFQDV HHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MPGAGWGLVDAHGRPKSAWHAFRRVSQPRQILLTDEGLNGLDVHVLNDTPAPLDARIELV CCCCCCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCCCCCEEEEE ALRDGKTPIARASRALRVGAHAGECVNSADLLGRFFDFTYAYRFGPREHDVVIASLYAAD EEECCCCHHHHHHHHHEECCCCCHHCCHHHHHHHHHHHHEEEECCCCCCCEEEEEEECCC GTLLSQAFHFPERTAPTVFERGDIGLEASAAYRDGRWHLDVQTRTFARYVHVCAPGLLPD CHHHHHHHCCCCCCCCCEEECCCCCCEECCEECCCEEEEEEEHHHHHHHHHHHCCCCCCC IDWFHLAPGAAARIVLAAAPHSPAYDNSPPDACAPRPAPPAIEVRALNSNKTIRPRIEN CCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEECCCCCC >Mature Secondary Structure MKSALDRVARGAAQWTLIATPAGAIARPSELGDAGWCAASVPGTVAQALAAARRFDPSHP CCHHHHHHHCCCCCEEEEECCCCCCCCCHHCCCCCCEECCCCHHHHHHHHHHHHCCCCCC YPLGDSDYWYRTTLHGAGPRIVRLNGLATIAEVWLDDTLLLCSDNMYVSHDVAVTLRGAN CCCCCCCCEEEEEECCCCCCEEEECCHHHHHHHHHCCEEEEEECCEEEEEEEEEEEECCC RLAICFRSLDRHLAAHPPRGRARWRTRLVDTPALRGVRATFLGRMPGWFPAIEPIGPWRP HHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC IDLVNPAGAPTIVRDTLRATLDGGDGVLDATLEFAAPLPSATRARLVCGAHAATLEATGP CCCCCCCCCCHHHHHHHHHHCCCCCCEEEHHHHHHCCCCCCHHHEEEECCCCEEEECCCC RTARATLRVPNVTPWWPHTHGEPALYDVGVEVGGATIPLAKTGFRTLAVERGDDGRGFAL CCEEEEEECCCCCCCCCCCCCCCCEEEECEEECCCEECEECCCCEEEEEECCCCCCEEEE SINGTPFFARGACWTSADPVGLNAEPAAYRRALSLARDAGCNMIRVGGTMTYEADAFYAL EECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCEEEECCCHHHHH CDELGLLVWQDFMLANFDYPSGDPRFAESLKREAEQFLGLHAARPSIAVLCGGSEIAQQA HHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHH AMVGLAPDERRVPATEQLLAELCAAHRPDAVYVSDSPHGGVLPFAPREGLTHYYGVGAYL HHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCEEECCCCCC RPPEDARRAGVRFASECLAFANVPCDETLASIGSPAAHEPAWKRAVPRDPGAPWDFDDVR CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCHHHHH DHYLRTLYGVEPARLRGFDPARYLTLSRAIVADLVGETLAEWRRVGSTCAGALVWQFQDV HHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MPGAGWGLVDAHGRPKSAWHAFRRVSQPRQILLTDEGLNGLDVHVLNDTPAPLDARIELV CCCCCCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCCCCCEEEEE ALRDGKTPIARASRALRVGAHAGECVNSADLLGRFFDFTYAYRFGPREHDVVIASLYAAD EEECCCCHHHHHHHHHEECCCCCHHCCHHHHHHHHHHHHEEEECCCCCCCEEEEEEECCC GTLLSQAFHFPERTAPTVFERGDIGLEASAAYRDGRWHLDVQTRTFARYVHVCAPGLLPD CHHHHHHHCCCCCCCCCEEECCCCCCEECCEECCCEEEEEEEHHHHHHHHHHHCCCCCCC IDWFHLAPGAAARIVLAAAPHSPAYDNSPPDACAPRPAPPAIEVRALNSNKTIRPRIEN CCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA